Basic Information

Insect: Xiphydria camelus
Gene Symbol: -
Assembly: GCA_963678675.1
Location: OY783199.1:24253148-24257450[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.2 16 6.7 3.8 2 23 273 295 272 295 0.96

2 17 0.0098 0.79 10.8 1.5 1 23 371 393 371 393 0.97

3 17 0.037 3 9.0 0.2 1 20 518 537 518 539 0.94

4 17 0.0099 0.8 10.8 1.3 2 23 580 601 579 601 0.94

5 17 0.0009 0.073 14.1 0.0 1 23 643 665 643 665 0.97

6 17 0.00058 0.047 14.7 0.1 1 23 671 693 671 693 0.97

7 17 4.9e-05 0.004 18.0 2.9 2 23 736 758 735 758 0.96

8 17 0.0043 0.34 11.9 1.5 1 23 764 787 764 787 0.98

9 17 3.6e-06 0.0003 21.6 0.2 2 23 795 817 794 817 0.96

10 17 0.00029 0.024 15.6 0.1 2 23 826 847 825 847 0.92

11 17 0.2 16 6.7 0.1 2 20 905 923 904 923 0.95

12 17 0.012 1 10.5 0.2 1 23 942 964 942 964 0.97

13 17 2e-05 0.0016 19.2 1.2 1 23 982 1004 982 1004 0.97

14 17 0.00021 0.017 16.0 1.7 1 23 1026 1048 1026 1048 0.99

15 17 0.5 40 5.4 0.2 2 19 1071 1088 1070 1089 0.87

16 17 0.00098 0.079 13.9 2.0 1 23 1126 1149 1126 1149 0.98

17 17 1.5 1.2e+02 3.9 1.4 2 23 1216 1238 1215 1238 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.2	16	6.7	3.8	2	23	273	295	272	295	0.96
2	17	0.0098	0.79	10.8	1.5	1	23	371	393	371	393	0.97
3	17	0.037	3	9.0	0.2	1	20	518	537	518	539	0.94
4	17	0.0099	0.8	10.8	1.3	2	23	580	601	579	601	0.94
5	17	0.0009	0.073	14.1	0.0	1	23	643	665	643	665	0.97
6	17	0.00058	0.047	14.7	0.1	1	23	671	693	671	693	0.97
7	17	4.9e-05	0.004	18.0	2.9	2	23	736	758	735	758	0.96
8	17	0.0043	0.34	11.9	1.5	1	23	764	787	764	787	0.98
9	17	3.6e-06	0.0003	21.6	0.2	2	23	795	817	794	817	0.96
10	17	0.00029	0.024	15.6	0.1	2	23	826	847	825	847	0.92
11	17	0.2	16	6.7	0.1	2	20	905	923	904	923	0.95
12	17	0.012	1	10.5	0.2	1	23	942	964	942	964	0.97
13	17	2e-05	0.0016	19.2	1.2	1	23	982	1004	982	1004	0.97
14	17	0.00021	0.017	16.0	1.7	1	23	1026	1048	1026	1048	0.99
15	17	0.5	40	5.4	0.2	2	19	1071	1088	1070	1089	0.87
16	17	0.00098	0.079	13.9	2.0	1	23	1126	1149	1126	1149	0.98
17	17	1.5	1.2e+02	3.9	1.4	2	23	1216	1238	1215	1238	0.92

Sequence Information

Coding Sequence: ATGGATGAAGTCGTGGAGTTGGAGAATTCGGAAACCGTATGCAGGTTGTGCTTGTCCACGGACGGGCCGATGACATCGGTCTTCAGCGTCGATGAATCTTCAGTACCGTTTACCTTTAAAATACAAGCCTGCTTGTCCATCGAGATTTCCGTTGATGATAAACTATCTACGGAAATATGTACATTGTGTGTAAAAAACTTGAGTCAATGGCACGTCTACAAGGAGTCTTGCCTTCAATCTCAAGAGAAGCTTCACCAAGGATCAGCTGCTGGATCGTCATCTGCATTGGTGGCAAACGTAAAGCAAGAACCAGTAGATCTGGATTTTCACGCAGTCGACGATGAGATACCGTCGGAGCGTAATGGCGGCGAGCGAGGTGAAGTAGATGTGGAACCTGATTTACATATGGAGGATACTCCGGAGGACGCCCATCTGCTCAACAATGAAGAGCATCCGGATGAGCCTATTCAGAGCGACACGCCTGCTAGACAGGGAAGAAATAATTCTAAAGTTGCTACAACCACGTCGTCTCTCTTGAAGAAGCCTGAGAGAAATTCGTCGGTCGATAAACAGCTTTGCATGGTGCGCATAAAATCAGAACCATTGAGCGACCACGAAAATGATTGTGACATAGAAATCGAGTCTGTCACTGGCAGCCAACTACTGCCAAATCCAATGGCTTTGAGCAACAACAAGGAAGATAGGATCATGGAGGCTGATTCTACTCAGAAAGCTAATCCCGCGACAGCCCGCTTGAAGAAAAAGCTGAAGCGAGGGCCTCACACGCATTTTCGCGGTGCGCGCATCTTCATAAAAAAGTGCTCCGTATgccagattaatttgcattccaaGTACTCTTACACAAAGCACATGGAGAGATTTCACCTTCCCGGTAGTGCTGCGTTTAAGAACGGAAAGCCGAATCCTAACTTACTCGAACAACAAATCCAGAATGTCAAAGTATTAAATGCAAAAGATGCCGGCAAGGGAGCGGAGAATGAAGATTTTGAAGAGGAAATGGTCGAAGACGTCGAGGACGAAATAATTCGCATGGAGAAGGACGCGCCTTTGTCTCAAGTTCAACAGAATATAATTGGTCAGTTGAAAACTTTCTCTTGCTACTCTTGTCAAGAGGTGTTCAGCGATCGTCGAAGTACCCTCAACCACATTCGTCAGCATATGCCGGACCTACGAGCTTACACGTGCATAGCCTGCCTCACGGAGTTCCCCGACCGATCTACGTACAAATCTCACTGCGGATTGTCTTTCGAGTGCGCGATGAAGATTGCCATGGTAGAACCAAAGTTTGGATACGAGAAGTATTTCACCTGCAACATGTGCTTGAGACCGATGTTGAATAGGAAGGATTTACTCAGCCACCTCTTCAAGCATTCCGACAAGCAGTACGCGCAATTGACGACCCCGTTGAGAGCTCCGCCAAAATTGAAACCAATTCTTCCTTTACCTCCTATTCGAAATCAGATGAGTTCTACTTCGTCGGACTTTCAGATAATACCGGGTCCTTACGAGAAAGGTGACCCCGCGTATAACCACGTCTGCGATTTATGCGGAATGATTTATAGATACAAGCCTAACATGTTAAAGCACAAAGAACTTTGTAACACATTGCCGCCAGAAGCTAGAACATCGTACAAGTGTATCCATTGCGGAATGACTTTCCTCgtctttaaaaaattccataATCATGTCACCATGGAGCATAAAAAGAAAGAGATGTCTTGCTCGAAATGTCGGGCAAAGTTTAAATCACCGAGCGACTTCCTCGCACATCACGAGGCACATCGTCAGATTACAGAGAACGACGAAGATTGCGATAAACCTGGCGGAATTCGCAGTCCGCTAAAGAATTGGGAAACATTCGGGGATGAAGTCCATACCGATAAAACAAGAATCGGCAACAAAAAGTATTCTTGCGCCCTGTGCGGGCAAGAGTTTCCCACGCGTGCCGAATTGGCGGAGCACAAGAATTTGCATCTCAAAGTGAAGATATATTCTTGCGTCATATGCAGGAGCATGTTTAGCAGCCCCGGAGCGTTGGAGATTCACATGAAAGATCACGGGATTGAAGATCCGAGCGAACAGAATGCAAACAGTTCCTGTATCGAGTACGCGAAAAACGACGACGATCAAACCGCCGAAATCAACAATACTTCCACGATGTCGGATCCCGGACCTTCGAGTTGCCGGTGCAACACGTGTAACAAGACATTCTACACTCTCGCCGGTCTCAATAAACACATCAAGAGTATTCACATGTCGGAAGATGTCTTCACTTGCGGCAATTGCAACGACACGTTCACGAATAAAATGTCGTACGAGTACCATTTGAAGACGGCACACGAACATCCGAAAGTTGCGCTAAAATGCCCCGAATGTCCAAAAGCCTTCATCTTCCAAGCAAATCTGAACTTGCACATGAAGAACATGCACAGCAACGAGTCGAAGAACCACTTGGAATGCGATATTTGTGGCAAAACGTTCGTGGAAGAGTTTTCCTTGCGAAATCACCGAGGTTGGCATTTCCGCACGAGCTGCCGCCTGAGTATAGATCGACTTAAACCGGAGCAAAAACGGCGAATGACCGAAAGCATGAAAGCGACTCCCGATTTGACGTCGCCAACGAGACCTGCTAGAGCCAGAAAGTCATTCCCCAATGCTCCTCCTTCTCCTGTGAAATCGATTGGTAATTTACAGTGTCAAGTATGCGATGACAAGTTCAGCGATGTTGTTGAACTTAGAACGCATTTATGGGATGTACATTGCGCTCGTAACAAATCGGAGAAGAATTACGCAACCGAAGAATTCCAGTGCGAGCTCTGCAGGAATATTTTCAACGACGGCGAAACTTTGAAAGATCACATGGAATGGCACAGGCAAAATCCAATTCTCAGTAATATCCGGAAAAACGACAGCGCGAAACCATTTTCGTGCAAGATCTGCGGTAAAACTTACACGGCGAAGAAGAGTCTCTGGAGACACGAGAAGCTTCACAAGACAAACGCGATGGTTTCGATGAAATTCCAATCGTTGATGAGGAAGCCTGTAACCATCCAATTTCAGTGCAACTTCTGCCGCCGAATGTTCGGTACCAAAGCTGCCTTGGTAAATCACAAGAAAACGCATCGCCCTTCACACTCCAATCAGAAAGTAAACCTAAAGGCGCCTCAAGTTTTGACCGGTAACAACGTGAAGTGCGAATGGTGCGACAGAGTTTTTGGCACCATGTTATCGTACCGCCTCCACCATTGGAATGGAACATGCAAGTATCGCGAGGAAATTCGACAGGAGCCGAGAGCCGAACGCACCAAGGTCGACGTGAAGCAAGAACATTCCGCTAAAGTTATTCAGAAACCTTTCAAGTGTCGGGATTGTGGAAAGGTTTGCATCGGAATGCGATCTTTGATGAAACACAAACAGACGGCTCACGCCAAAGCGACGATGAACAGTGAGAAATACTCCCCGATAGTATTGGAAACCGGCATGTTTTGTTGCAACGTGTGCGGGGATATGATGAAGCACTTGGTTAGCTCGCACAAGAGCGCATTCAATTCCAGCGGCGACCAAGCGAGTTTATATGTGAGAACCGACTTGAACGACTATACGGTGGACGGAGCAACTGGTTGTATTTGCCCTTTATGCAAAATCAAATATCCCAACATCAGGGCAATGAAGATTCACTATTTTAAATTCCACGAATCGAAGAACTGA
Protein Sequence: MDEVVELENSETVCRLCLSTDGPMTSVFSVDESSVPFTFKIQACLSIEISVDDKLSTEICTLCVKNLSQWHVYKESCLQSQEKLHQGSAAGSSSALVANVKQEPVDLDFHAVDDEIPSERNGGERGEVDVEPDLHMEDTPEDAHLLNNEEHPDEPIQSDTPARQGRNNSKVATTTSSLLKKPERNSSVDKQLCMVRIKSEPLSDHENDCDIEIESVTGSQLLPNPMALSNNKEDRIMEADSTQKANPATARLKKKLKRGPHTHFRGARIFIKKCSVCQINLHSKYSYTKHMERFHLPGSAAFKNGKPNPNLLEQQIQNVKVLNAKDAGKGAENEDFEEEMVEDVEDEIIRMEKDAPLSQVQQNIIGQLKTFSCYSCQEVFSDRRSTLNHIRQHMPDLRAYTCIACLTEFPDRSTYKSHCGLSFECAMKIAMVEPKFGYEKYFTCNMCLRPMLNRKDLLSHLFKHSDKQYAQLTTPLRAPPKLKPILPLPPIRNQMSSTSSDFQIIPGPYEKGDPAYNHVCDLCGMIYRYKPNMLKHKELCNTLPPEARTSYKCIHCGMTFLVFKKFHNHVTMEHKKKEMSCSKCRAKFKSPSDFLAHHEAHRQITENDEDCDKPGGIRSPLKNWETFGDEVHTDKTRIGNKKYSCALCGQEFPTRAELAEHKNLHLKVKIYSCVICRSMFSSPGALEIHMKDHGIEDPSEQNANSSCIEYAKNDDDQTAEINNTSTMSDPGPSSCRCNTCNKTFYTLAGLNKHIKSIHMSEDVFTCGNCNDTFTNKMSYEYHLKTAHEHPKVALKCPECPKAFIFQANLNLHMKNMHSNESKNHLECDICGKTFVEEFSLRNHRGWHFRTSCRLSIDRLKPEQKRRMTESMKATPDLTSPTRPARARKSFPNAPPSPVKSIGNLQCQVCDDKFSDVVELRTHLWDVHCARNKSEKNYATEEFQCELCRNIFNDGETLKDHMEWHRQNPILSNIRKNDSAKPFSCKICGKTYTAKKSLWRHEKLHKTNAMVSMKFQSLMRKPVTIQFQCNFCRRMFGTKAALVNHKKTHRPSHSNQKVNLKAPQVLTGNNVKCEWCDRVFGTMLSYRLHHWNGTCKYREEIRQEPRAERTKVDVKQEHSAKVIQKPFKCRDCGKVCIGMRSLMKHKQTAHAKATMNSEKYSPIVLETGMFCCNVCGDMMKHLVSSHKSAFNSSGDQASLYVRTDLNDYTVDGATGCICPLCKIKYPNIRAMKIHYFKFHESKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -