Basic Information

Insect: Xiphydria camelus
Gene Symbol: -
Assembly: GCA_963678675.1
Location: OY783200.1:2538505-2543557[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.5 2.8e+02 2.8 2.2 2 23 494 515 493 515 0.83

2 18 3.4 2.8e+02 2.8 1.3 1 19 521 539 521 543 0.81

3 18 0.045 3.7 8.7 0.8 3 19 558 574 557 578 0.85

4 18 0.057 4.6 8.4 3.5 2 23 586 608 585 608 0.95

5 18 1.7e-05 0.0013 19.5 1.4 1 23 614 636 614 636 0.98

6 18 0.0011 0.089 13.8 2.8 1 23 642 664 642 664 0.97

7 18 2.5e-06 0.0002 22.1 2.0 1 23 670 692 670 692 0.99

8 18 0.94 76 4.5 0.0 1 21 703 723 703 724 0.94

9 18 0.04 3.3 8.9 1.5 1 23 743 765 743 765 0.93

10 18 0.0095 0.77 10.8 0.5 1 23 771 793 771 793 0.95

11 18 2.2 1.8e+02 3.4 5.4 1 21 812 832 812 833 0.93

12 18 0.0019 0.15 13.0 0.1 2 21 841 860 840 861 0.94

13 18 0.013 1.1 10.4 0.2 2 23 869 890 868 890 0.96

14 18 2.6e-07 2.1e-05 25.2 1.3 3 23 902 922 900 922 0.98

15 18 0.018 1.5 9.9 0.8 1 23 928 950 928 950 0.97

16 18 7.3e-06 0.00059 20.6 2.2 1 23 956 978 956 978 0.98

17 18 0.00014 0.011 16.6 0.4 1 23 984 1006 984 1006 0.98

18 18 8.4e-05 0.0068 17.3 2.3 1 23 1012 1035 1012 1035 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.5	2.8e+02	2.8	2.2	2	23	494	515	493	515	0.83
2	18	3.4	2.8e+02	2.8	1.3	1	19	521	539	521	543	0.81
3	18	0.045	3.7	8.7	0.8	3	19	558	574	557	578	0.85
4	18	0.057	4.6	8.4	3.5	2	23	586	608	585	608	0.95
5	18	1.7e-05	0.0013	19.5	1.4	1	23	614	636	614	636	0.98
6	18	0.0011	0.089	13.8	2.8	1	23	642	664	642	664	0.97
7	18	2.5e-06	0.0002	22.1	2.0	1	23	670	692	670	692	0.99
8	18	0.94	76	4.5	0.0	1	21	703	723	703	724	0.94
9	18	0.04	3.3	8.9	1.5	1	23	743	765	743	765	0.93
10	18	0.0095	0.77	10.8	0.5	1	23	771	793	771	793	0.95
11	18	2.2	1.8e+02	3.4	5.4	1	21	812	832	812	833	0.93
12	18	0.0019	0.15	13.0	0.1	2	21	841	860	840	861	0.94
13	18	0.013	1.1	10.4	0.2	2	23	869	890	868	890	0.96
14	18	2.6e-07	2.1e-05	25.2	1.3	3	23	902	922	900	922	0.98
15	18	0.018	1.5	9.9	0.8	1	23	928	950	928	950	0.97
16	18	7.3e-06	0.00059	20.6	2.2	1	23	956	978	956	978	0.98
17	18	0.00014	0.011	16.6	0.4	1	23	984	1006	984	1006	0.98
18	18	8.4e-05	0.0068	17.3	2.3	1	23	1012	1035	1012	1035	0.98

Sequence Information

Coding Sequence: ATGAATATCTTGATAGAAAACTCTCAGGGAGAGATTTTGACTATCCCTGTGAGGGAGACCGATACATTTCGAGAGCTCAATGCAAGGACACAAAAGGACTACGGATTGCAAATGGATTTCACCAATTTGCAGGGAACAGAGAGCATTGATTTTGACGAAAATATCATTGAAACGCTCTCCAGTCAGTATCTACAAATATCCCAGATTCAATCACCAGGCAAAACAGAGCCGTCACAGTCTCCTAACTTTTCTCCATCCTCTGTAGAAAACGACCAACTCGTCTCCATGGAAGCCAAGGATTACATCTCAGAGCAGATTAAGGAAGACTCGAACGAATCCGCGGAAAAAGCCGACCTAGTCGTGGAAATAGAAAGGGGAGAGACAGCTCGTCCCGACGAAATAGATCTGAGGCTAAAACTTGAACACCACGCATTGGCTCAATCGCCAAAAAGCGACGAGTTTGCACCATCGAATCCCGAATGCAGACGAGAAGGAGACGACGCGAACATCGTTCTTCGTGATACGATGAACTCTGAAGACTCTGCCAGCCCCGAAGGGACGAACGACCAGCAGATCAGCGCGAAAAGCGCCGCCTCAATCGTTTCGGAGAACACCGACGAAGTGGACACGTCCGTTTGCAGGCTCTGCGCGTGCAGCGGCGAGAAGATGTTGTCCATCTTTGGATCCTCGAAGCTGGAGAGAGAGATAACGCGGAAAATCGATGATTGTCTCCCGATCATGGTACAAAAGACCGACGTACTATCGAAGCAAGTCTGCCGCGCTTGTTTGGAGAAGCTCGACACGTGCTACGAGTTTCACAAGACCGTCGTGGAGGCGGAATCGCGGCTACTGCGGATGAGAAGCGTCTCGAAATTCACTCGGAAACGCTGCGAAGCGTATGAGCAAAGGACGATGAAAGTCGATCGTATATCGGAAAAAGTCGATAAACCGACTGACAGCTCATCAGCTGCGAGTCCGTTGAAGATAGGATCGAAGAGAAACGCTACCGATGCGACGTCGACGGGCGGCTTGTCTTCAGGAGACTtcaataatgaagaaaatcgggaTTTTCAGCGGAAAAAGAGAATAGAGTCTACTGACGATATTTTGCTGGACGATAAGACTTCCGAAACCGAGCAAAACGCATCGTCGGTAACCGCAATGGTAGAAATTACGAAATCTGAAACGAGCGACGGCGCGTATTTTCGAAACGGACGAAAGTCCGAGAGATCCAAGGCCTCGAGAAAAATCGGCAAGTCACGGCCGAAAGCGAGAAAAGCCGGTGGAAGGGTCGATTTCACGAAGAAGATGACCAAGCTACCATCGCGCGCCAAGAAGAGCAAAATATCCCAGGAAACGGACGCTGAGGAAATCCTCGTCGGTGAAGAAACTCCGAGCGATCGCAGTTGCAGCGATTCCGAAGAAAGCCCGACGGTTTACTGCCGAAAATTCGCATCGTCCGGCGACTGCAAAGTGGTCAAGTGTCGCATCTGCGAGGAGAGCTTCGCCACGACGGCCGAGTGCCACTCGCACTCGAGTGTTCACGCGGGCGAGGACTATCATCCGTGCGGCCTCTGCGAGAAGACCTACGCCACCGAGGAGGAGTGCAACGAGCACTTCGTGGAGCACACGGAGGGCAAACGCTGCGAGAGGCGATCGGCCACGCACGGCTGCGACGAGTGCGGCAAGAAATTCGTCACGAAGGAGAGGCTGCAATTCCACGAGACGTTTCACAGCTCCGACGCGAGACCCTGCTACTGCGAGAAGTGCGATAAATTTATGGTGTCGGAATCGTCGCTCTATCATCACCTGCTCACGGTGCACCTGCAGTACAAGGAGTTCTGCTGCGACATTTGCGGGAAGCAATTCAGGGCCCAGGCACAGCTGGACGCCCACCAGAGGAAGCACAAGGACGAGCGGCCGTTCGAGTGCACGATATGCAAGAAACGCTTCTACTCCAGCGAGATCTTGAAGAGGCACAAGAAGCTCCACCTGCCGGACAAACCCTACCAGTGCGATCAATGCGGAAAGCGGTTCGACAGGACCAACAGCCTGACGAAGCACTTGCTGAGGCACCAGGTGGAGACCGGACGGTCGGCGGAGTGCTACGTCTGCGCCGCCTGCGAGGAAATATTCCCAAATCCGTTCACCGCGACCGCCCACCTAAAAAAATGCCGACCCGGCGAGGAGGACGGCCAAATCGAGAGGAGGAACTTCCGCGCGCTTTACAGGTGCGAGTTTTGCGAGCGCTGCTTCGCGGAGATCAAGTCGATGAAGGCCCATCGGGTCGGCCACGTAGGACCTCAACCCTACGTCTGCACCAAGTGCGACACGTCCTACGCGACCTACAACCAGGCGACGGCTCACAAGTCCGCGCACAAGAAGTCCTCGAAGAACTCGAGCTTCAACGAAGACATCCCCGTGCCGAAGTACTTTTGCTGCGGTTACTGCAACAAGCACTTCCTGCACTACACGAACATGAATATTCACCGAAAGGCCTGCGCCGCCGTGAAGCACTGGAGGTGCCGCTACTGCGGCTCGGTTTTCGCGAACGCCAGGGATCTTTCCAAGCACAAGAGGGGAAAGCAAAACCAGGAAGCCTGGACCTGCGAGGAGTGCGGTCTTATCTTCGGCTCCGTCTGCGCGCTGGAGACGCACAAGGAGACGCATTCCGAGGCTTTCGCGGGCAGAAAGACCTACGGATGCTCGTACTGCGGGAAGGAATTCATTCAGAAATCCCATCTAACTGTTCACATCAGAAGTCACACCGGGGAGCGACCGTTCGCCTGCGACCTCTGCGAAAAGACGTACAAGATTAAAGCCGAGCGGGACAATCATCGCAGGACCCACACCGGCGAAAGACCGTACAAGTGCACGACCTGCGACAAGACGTTCACCAATCCCGCTCGGCTCAGGGAGCACACGAGATTTCACACGGGCGTTCGGCCCTACAAGTGCGAGATCTGCGAGAAGGCGTTCAAGAAGGCGAACGCCAAGAAGGTCCACATGACGATTCACACCGGCGAAAAGCCGTACCAGTGCGACGTCTGCAACACCTACTTCCGGAGGATGGGCGACATGCGGAAGCACAGGCGGACGCAGCACGAATTGTAG
Protein Sequence: MNILIENSQGEILTIPVRETDTFRELNARTQKDYGLQMDFTNLQGTESIDFDENIIETLSSQYLQISQIQSPGKTEPSQSPNFSPSSVENDQLVSMEAKDYISEQIKEDSNESAEKADLVVEIERGETARPDEIDLRLKLEHHALAQSPKSDEFAPSNPECRREGDDANIVLRDTMNSEDSASPEGTNDQQISAKSAASIVSENTDEVDTSVCRLCACSGEKMLSIFGSSKLEREITRKIDDCLPIMVQKTDVLSKQVCRACLEKLDTCYEFHKTVVEAESRLLRMRSVSKFTRKRCEAYEQRTMKVDRISEKVDKPTDSSSAASPLKIGSKRNATDATSTGGLSSGDFNNEENRDFQRKKRIESTDDILLDDKTSETEQNASSVTAMVEITKSETSDGAYFRNGRKSERSKASRKIGKSRPKARKAGGRVDFTKKMTKLPSRAKKSKISQETDAEEILVGEETPSDRSCSDSEESPTVYCRKFASSGDCKVVKCRICEESFATTAECHSHSSVHAGEDYHPCGLCEKTYATEEECNEHFVEHTEGKRCERRSATHGCDECGKKFVTKERLQFHETFHSSDARPCYCEKCDKFMVSESSLYHHLLTVHLQYKEFCCDICGKQFRAQAQLDAHQRKHKDERPFECTICKKRFYSSEILKRHKKLHLPDKPYQCDQCGKRFDRTNSLTKHLLRHQVETGRSAECYVCAACEEIFPNPFTATAHLKKCRPGEEDGQIERRNFRALYRCEFCERCFAEIKSMKAHRVGHVGPQPYVCTKCDTSYATYNQATAHKSAHKKSSKNSSFNEDIPVPKYFCCGYCNKHFLHYTNMNIHRKACAAVKHWRCRYCGSVFANARDLSKHKRGKQNQEAWTCEECGLIFGSVCALETHKETHSEAFAGRKTYGCSYCGKEFIQKSHLTVHIRSHTGERPFACDLCEKTYKIKAERDNHRRTHTGERPYKCTTCDKTFTNPARLREHTRFHTGVRPYKCEICEKAFKKANAKKVHMTIHTGEKPYQCDVCNTYFRRMGDMRKHRRTQHEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -