Xcam013962.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- -
- Assembly
- GCA_963678675.1
- Location
- OY783196.1:28765788-28777494[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 2.7e-05 0.0022 18.8 0.9 1 23 223 245 223 245 0.98 2 30 0.0045 0.36 11.9 1.9 1 23 268 291 268 291 0.96 3 30 0.00022 0.018 16.0 0.5 2 23 298 320 297 320 0.96 4 30 0.00035 0.028 15.4 0.4 1 21 340 360 340 361 0.95 5 30 0.0039 0.31 12.1 0.3 3 23 467 487 465 487 0.96 6 30 0.0087 0.7 11.0 0.1 1 23 493 516 493 516 0.90 7 30 0.00019 0.016 16.1 0.1 1 23 589 612 589 612 0.96 8 30 0.013 1.1 10.4 0.4 1 23 618 641 618 641 0.96 9 30 0.2 16 6.7 1.5 1 23 654 676 654 676 0.97 10 30 5e-05 0.0041 18.0 0.8 3 23 721 742 719 742 0.96 11 30 0.82 67 4.7 0.6 2 23 807 830 806 830 0.93 12 30 9.2 7.5e+02 1.4 0.0 2 23 839 861 839 861 0.83 13 30 0.16 13 7.0 0.0 2 23 868 890 867 890 0.93 14 30 2.1e-05 0.0017 19.2 1.2 1 23 898 920 898 920 0.98 15 30 0.00035 0.028 15.4 3.3 1 23 982 1005 982 1005 0.97 16 30 0.03 2.4 9.3 0.5 2 23 1012 1034 1011 1034 0.95 17 30 0.0053 0.43 11.6 5.1 1 21 1062 1082 1062 1083 0.95 18 30 0.0044 0.36 11.9 1.8 2 23 1097 1118 1096 1119 0.93 19 30 0.41 34 5.7 1.1 1 23 1122 1145 1122 1145 0.94 20 30 0.033 2.7 9.1 2.4 2 23 1152 1175 1151 1175 0.93 21 30 1.6 1.3e+02 3.8 0.2 2 23 1183 1205 1183 1205 0.95 22 30 6 4.9e+02 2.0 0.0 2 23 1212 1234 1211 1234 0.87 23 30 0.26 21 6.3 3.1 2 23 1243 1265 1243 1265 0.96 24 30 3.2 2.6e+02 2.9 1.0 2 23 1271 1293 1270 1293 0.92 25 30 0.27 22 6.3 0.1 1 23 1356 1379 1356 1379 0.95 26 30 0.0004 0.032 15.2 1.6 1 20 1408 1427 1408 1429 0.96 27 30 0.82 66 4.7 1.3 2 23 1559 1581 1558 1581 0.93 28 30 0.7 57 4.9 0.2 2 23 1588 1610 1587 1610 0.94 29 30 1.1 93 4.3 2.5 1 23 1621 1643 1621 1643 0.97 30 30 1.5 1.2e+02 3.9 0.1 3 19 1652 1668 1652 1671 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCGAGGGAGCGCTATCACGAGCTTTGCAGGCTCTGCGCCTCCTACGACGCCGTCAAGATGGATATTTTCGGCCAGGAGGGAAGAAATCGTCAACTCGTCGACAAGATCCAGACCTGCCTACCGTTCAAGATAGCGGAGAACGATCGATTGCCGAAATGTTTGTGCTATCGATGCATGTACAATTTGGAAAATTTCTACGACTTCAGGACGGCGTGCGTGAATGCCGTGGCGTTGCTGGAACGATGCTTGCCGCTCAAAGACACGAGTTGCGATGGAGCGGAAAAGGAGATCGAGCGGTACACCGAGTTACGCTCGGAACTTCTCAAGGAGAAAGAGAATATGCCGATACTCATTCCCGAGGCCCCGATAGTTAATCCTAACGCAGCATTGGGTACTCCACCGAGGCTCAACTCTGACGGAGAAGCCGACCATGAAATTGAAGAGATTCTCGACCACAGCGGCACCGAGGAAGGTGTGGACGATCGCGAAGATCCAAAGTCGGACGAGTACGAGATGGACATGGAGACGAATCCCAGCGACTTCCTGGAAATGACTTCCATAGTGACCGAGGACGCCGAGGAAAACAACACGGCGAACGCGTCATTGCCGGTGGCGCAAGACTCTGGGGTTTTCCAGCACACGTCCGAGCAGCACGAGGTCTACGTTTGTTCTTTGTGCAGCAAGGCGTTCAGTTCGAAAGGACACCTGTCGCTTCACGCGAGGATTCACGTTGGCGCTGGTGACGTGATCGGCGAGAAGGTCATCACCGACGATCACACATCGTACAAGAGGCCCTACCAATGCGATCTCTGCAACAAATCCTACTCCACGGCGAAGCACAGATGGGGCCACGTCTCCACGACGCACAGAGGTCATCCGGCGGTAACGTGCGGCTACTGTTCCCGCATCTATTCCACGAGGACGAATCTCGAGGAGCATATAAAGTCGCGACACGCGGGATTGCCACCGCCACCAGAATTGCCGACCCCTTACGTTCAGCCGGACAATAGGTTTCAGTGCAAAATGTGTCCGAAGATGTACACGAACGTGACCGACTTGAACAAGCACAGTCGAGTCTGCCTGAGGGCAGGCGAGCGACGGAGGGAGGTGCCAGGCAAAATTTCGATGCGAAAGAGCAAGGCTCCGATCGATACGTCGGATCTGTCCAGCCTGGATTCCGACGACGAAGGTAGCGGCAAGGATTACCGCGACGCGGAGGCGAAGCTCGCGAAGAACCCGCAGCTCACGATTCTCAAGCAAGCTCTCACCAAGGGGGATTCTCCGATGCGAGATTTCGTCGAGGATAGACATCGGATTGCCACTGGGTGTAAGCCGAAGAAAGTGGCGCGGACAGATAGCAGCGAGATCGAGGGCCAGCAAAAGAGGTGGTTCTGCGAGATGTGTCCACGGAATTTCACGTCGGTGGAGAGTTTGAAGGAACACGAAACGACGCACGACGCGGACAAGCCGTTCATTTGTGTATTATGCGAGAAGGACTTCGCCTTGAAGTCTTCTCTGAGTCGGCACATCGTGGCCTCTCACGGCGTGGATCCCGGGCCCATAATAGACAGCGACAAGTGCCTGAAGCGAACGGCGTCGTTGCCGTTCCGGAATAAGCAGAATCAAGTTGCACTTAACGATGCCAAATTGACCAAAGCAGCGTCCGAATCCCCATTTTCTCCCGCTGAGATGAAACTGGAAAATGACGAGGAGGACCGTGAAAGCTCGCACGAGAATATGATCGAAATAGAAACGGTGTTTGTCTGCGAGATCTGCACGAGGGACTTCAACGATCGGGCATCGTTGTGGCTGCACATACGCGCGACTCACAAGGAATTCGCCGCGTTCGCCTGCGGCGTCTGCTTGAAGATCTGCTCTGACAACGCCCAATTGCTGAATCACGTTAATATGTATCACGGGGGATCGAAACTTCAGGTGTCCGAGCAAAGAAGGTACAGCTGTACGATTTGTGGACGGCAGCATGACTCTCGAAAGAAGTTAATTACTCACGTTTCGATTCATAACGTTGACCCGAGTTATGATCCAGCCAGCTTCGTTCAACTGAACAGCAATTACTACAATGAAAATCTAAATAGCAATGAGGCCAACGAGCAGGCATTGGAGTTTGAAGTGGACGACGGAGAGAAAATGGACTGTTACATTTGTTACAAATCGTTCCCGAACGAGGATCATCTCATACGCCATCAGCGAAACGCTCACAAGTCCGAACACCTGGCGCCGATCGGTGACCCCAGCGGAAGTGGAAACGGTTCGAACGGAAGCGGAAATGGGACTGGGAACCGCGCGCAGTaccatctcttcttcgtctgcGAGCTTTGCGGTAGTTCCCATCCGAGTAAGTGGGAGAGATGGCTTCACGTCAGCAGCATGCACAGCAACGAGCCCGCCATCCGATGCGAACGCGTCGATTGCGCCAAGATCTTCGCTACCAGATCGTTACGCAACGAACACGCCCAACACCACGCGGTGCAAGGTGCGTCACCGAATACCTGCGAGGTCTGTGGAAAGCTCTGGGGCAGTCGCGTTGACTACTGGAAGCACGTAATGGGCGTGCACTCGGATACGGTGCCACTGATCTGCGGGGTGTGCCTCAAGGTGTTCGCCGATGTCATTCAATTAAGCGCCCACGTCAAAGCCAACCATTGGCCGCTGACTAACGGCGACTTCAGTTGCGATATCTGCGGGCGACCGTATTCCAACAAGTCGAAAATGTCGAGACATCGAAAGATTCACGGATTGGATATCGATGGCTATGCGAACAACAGCGTCAACGACGTGGCAGTGAATGCGAACACGACGAAGCTCGAACATCGCGGCGCTCCCGCGGATAACGATTTGACTTGCGACATGTGCACAGACCTCAAGTTCCTGAGCCTGGAAGAATTGTGCAATCACAGGCGAACCGCCCACGGCCTTTTCCCCTGTGATTTGTGCAACAAGTGCTACGGCAGGACTTCGCATTTGTGGAAACACGTAAATCGCGTGCACAAGGGTCACGAGGACGTGACGTGCCGATACTGCATGAAGACTAGCGCGTCCAAAGATCATTTGGCCGCTCACATAGCGAAGATTCACAGGTACGAACCGGACGCCAAGAGGGAGATCCGGGATGAATCCGCGAGTTTCAAGTCGCCGAATCCAGAAGAGGAAGGCTTGCATCACTGCGAGAAGTGTAACAAGGGTTTCCACAAGCGGTACCTGCTTCGTCGTCACATGAAGGGCTGTCAAAATTATCGGAAGGATCCCGGCGCCCTGTTGACTCGATGTCGCGCGTGCGAGAGAATCTTCAAGGATCGCGCCAGTCTTCAGAAGCACATAGAGAACCACCACAGCTCCTACACGTGCCACTTGTGCGACGAGACGATCACTTCTAAACTCGGCATCATGACGCACAATCGCGTCAAGCACAAGGATCATCCCGATCTCACCTGCGACCACGCCAACTGCAAGAAACTCTTCCGAACGAAGGAGGACTTGGAGTCGCACAAAAAGGATCACAAGTACCTCAACAGTCCCAATGTGTGCGACTTCTGCGGCGACACGGTGGAAAATAAGCTTAAGCTGAAAATGCACATCCTCTCGTTGCATCGGAACGAAATTGGAGTGTCTTGCGGTGTCTGTCTCATTCCTATGAAGGACCCTAAGGACTTGAAGAAGCACGTGGAGGACGAGCACAGCGGCAGACTGTCCAAGCCGAATACGTGTAAAGTGTGCGGAAAGCAATACGCCTCCAAGTGGAAGGCGTTCGATCACACGAAAAAGTGTCACGGCAAGGTCTTCCAGACCTGCAAGCAGTGCCTGGCTGTCTTCACGAACGACCAAGATATTCGCAACCATTACGAGCACGTGCACAACGTCCCGAAAGATCAGTTGGCCTGTTATCAGTACCGTTTAGAGGTCGGACCGAAATCGGAAGAATTCGACGCGTCGGAGATTAGGGTTAAGGAGGAGCCGCCCGAGGACTCGGAGTTCGGCGATATGCAACTCAGCGTGGAGAATGCCAAAGGACGCAAGAGGAGGCGATCGCACTGCGATACGTTCGATTGCGAGATGTGTCCGGAGATCTTCCTGAACGAACGGACGCTCGCCGAGCATTATCGAAACGTTCACAACGCGGATCCGCTGCAGTTGTTCAAGAAAACGAGGTTGGACGGCAAGGGCGGCGGTAAGAAGAAAGCGAAGAGTCGTCCGAATTTCGAGTGCAAAAATTGCGGGAAGCAATTCTGTACGAAGACATTGTTCTGGAATCACATCGACGCGTGCGCGAGACGTAACTCTCTGAttaaagaggaagaagaagaggaagaggaagagggcgaggaggaagaggaggaagaagaggaagaggacgaGGAGGAAGGATCGCGACAGAAGCGGGAAAGCGGTGTCGCCGTAACAACCTCAATTTTGGAGTCGCGTTTGAAGAATAACAATCGAATCAAGAGGGAGGAACCCGAAACCGCGGGCGAGTCCAATTTAAACATTCCCGACTTCAAtctttttgaaaatatcaaTATGCAACTCTCCGGGCAAAAACCAGTGCCGAACCTCATGCCTCTATCCCAAATGAAGGCGTTCAATGGGAATTCGAAATACTCCCGAAAAGATTCCCGCAAGGTTTACGACGAGTCGACGAACACCGAGTGTGCGTGCGAAGTTTGCGGTAAGCAATGGCCCGCCAAAAAACACCTGTGGCAGCATTTGATTCGGTTTCATCGAGCGGAAGCCGCCGTAACGTGCGGCGTGTGCCTGAAGCTGTGCAGCACGTACGCGGACCTCGCGGATCATTTGAAGGATGCGCACGAGGCGATACTAACACGCGAAGGCAACAATTTCACTTGCAAAACTTGCGGCAGATATCACAACGCCAGAAGTAAGCTATTATTGCACATGAGCATACACATCAATTGCTATGGAAATGCTTGGTGCGCCAAGTGCCAGCAAAGCTTCGAAAGCGAGGAAAAGCTCGCAGAGCATAGCACCGTCTGTACCGCGAAGCAATCGGACTACGAAGATCACTGCGATAACGATACCGACAACACTACGCAACGGAACAACGATGATAAGTGCAGCTTGATGGAAGACGAGAATTCCCTTACCGAAGAGGTTGAGGAGGTCGATTTTGAATCCGAAGTGGAAGAAGGGGACGACGCGTCCGACAATCGCCAAGAGAGCAATTCCGAAAATACGGATGACTCTGATAGTTCTAGCAATGCGAGTACGAGCGACGATGAGGAGAATGAAGGCGAAAATAACGGAGAGGGCGAAACGAGATCTAACAGCGGAGTTACAGAAGAGGTTGGAAGCACCACGGACGATGATTCCGATAATTCTGCAGAGGATGACGATGAAGATGCCTCGGACGATGATCACACGCCAGTTAATGAAATTGGGAACTCCAATGGCCATAGCGATAGCGACGAGACGAGCGTGATCGAAAGGGATAATATTATGCGGGAGACGAGCGCCGAGGAAAGGACCCTTAAGCATGTCGACGGTGATACGAATGGCGGGGACGAGAGATCGATGGCCGTGACTCCAACACTCGCGGCAAGCTCAACCGAAATTAAAGACTCCTGTGACTCACGCACGGAGGATCACCCAGTCAATATGCAGCCCGCGCAAGCCGAGGACTCTGCTGGTGACGACGATGATCACGATAGTGACGATGACCACGATAGCGATAGCGACAGCGACAGTgatagcgacgacgacgacgataacgACAACGACGATGAAGATGACGATGACGGGCCACCGATCTTGAGTCCGATAGTTCCTCTGCCAACGTCAACTCGGGAAGGTGAGGAACGAGAGAATTGTCAAGTGAACGACACGCGACACGAATTGACGCCAATGGTATCGGTGCCGGCAAAGGCGGAGAACGAGATGGATATATGCGAGCTCGACGAAATCAGGAACGAAATAGAGAGAAGCAAGTCATCCAAGTTTCCGAATTCCGAGGAGTACTGTGAGGTTGGAAAGATGGAGAAAAACTCGACGAGCGATCGTTCTTTGACAGGCATGCTGGAGTCTGAATCTGAAGATGGCGAAACGCGAGCAGCCGATGACCGTGACGTGGAGGAGCCGactgacgatgacgatgacgctCGGACCGAAGCGGCGGAGCATGACGCAGGCTCCAAGATCGAATACGAAGAACAATCTGGAGACTCTAATCCGGGTAATACGTACGAGCAATGCGAGGAGAATCGAAACGTCGAGGACTCCGTGGAAGAGACTTACGAGGAGAATTCGGACGTCGAGGCGATGGAAGTCGAAGTTGCCGAAGAAGACAGCGAGGTACGAATACATAACTTGGATGGAACCGTGTTGGTCGTGGCGAACGATGCCGAGGGTAATCAGATATTGATTCAACGGAACGTATCCGACATGGCGAACGATGACTCCAACCAGGAAATGACGCAGTACGTATATCAAGACGGAAACGCGTACGAATTAGAGGGATACAGAATAGAAGAACACGAGGATGACGCCGCGTCGCCGGCTGTCGAGATACAAGAGATTTCGGATGACGATGAGGCCGAGGGGGGCGAAGGGGAAATTGAAATAGTACAAGGTCACGAGGAAAGCCGAGAAGGAGAGGCTGAAGGCGAAGACGGGCCGGAGGAAAACCAAGGAGACGACGATAGTGAGATGGATGACGAAGCGACGGTAGAAGAGATGGAAGGcgaggtggaggaggaagaggaagaacgcgaagaagaggaggaagaagcaGACGTCCAGACTATGAATATCAGTGCCAAAAGTGAAGTGTCGAGGACGTAA
- Protein Sequence
- MEPRERYHELCRLCASYDAVKMDIFGQEGRNRQLVDKIQTCLPFKIAENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPLKDTSCDGAEKEIERYTELRSELLKEKENMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEILDHSGTEEGVDDREDPKSDEYEMDMETNPSDFLEMTSIVTEDAEENNTANASLPVAQDSGVFQHTSEQHEVYVCSLCSKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPELPTPYVQPDNRFQCKMCPKMYTNVTDLNKHSRVCLRAGERRREVPGKISMRKSKAPIDTSDLSSLDSDDEGSGKDYRDAEAKLAKNPQLTILKQALTKGDSPMRDFVEDRHRIATGCKPKKVARTDSSEIEGQQKRWFCEMCPRNFTSVESLKEHETTHDADKPFICVLCEKDFALKSSLSRHIVASHGVDPGPIIDSDKCLKRTASLPFRNKQNQVALNDAKLTKAASESPFSPAEMKLENDEEDRESSHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLQVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEANEQALEFEVDDGEKMDCYICYKSFPNEDHLIRHQRNAHKSEHLAPIGDPSGSGNGSNGSGNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSMHSNEPAIRCERVDCAKIFATRSLRNEHAQHHAVQGASPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFADVIQLSAHVKANHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDIDGYANNSVNDVAVNANTTKLEHRGAPADNDLTCDMCTDLKFLSLEELCNHRRTAHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCMKTSASKDHLAAHIAKIHRYEPDAKREIRDESASFKSPNPEEEGLHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETITSKLGIMTHNRVKHKDHPDLTCDHANCKKLFRTKEDLESHKKDHKYLNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHSGRLSKPNTCKVCGKQYASKWKAFDHTKKCHGKVFQTCKQCLAVFTNDQDIRNHYEHVHNVPKDQLACYQYRLEVGPKSEEFDASEIRVKEEPPEDSEFGDMQLSVENAKGRKRRRSHCDTFDCEMCPEIFLNERTLAEHYRNVHNADPLQLFKKTRLDGKGGGKKKAKSRPNFECKNCGKQFCTKTLFWNHIDACARRNSLIKEEEEEEEEEGEEEEEEEEEEDEEEGSRQKRESGVAVTTSILESRLKNNNRIKREEPETAGESNLNIPDFNLFENINMQLSGQKPVPNLMPLSQMKAFNGNSKYSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSTYADLADHLKDAHEAILTREGNNFTCKTCGRYHNARSKLLLHMSIHINCYGNAWCAKCQQSFESEEKLAEHSTVCTAKQSDYEDHCDNDTDNTTQRNNDDKCSLMEDENSLTEEVEEVDFESEVEEGDDASDNRQESNSENTDDSDSSSNASTSDDEENEGENNGEGETRSNSGVTEEVGSTTDDDSDNSAEDDDEDASDDDHTPVNEIGNSNGHSDSDETSVIERDNIMRETSAEERTLKHVDGDTNGGDERSMAVTPTLAASSTEIKDSCDSRTEDHPVNMQPAQAEDSAGDDDDHDSDDDHDSDSDSDSDSDDDDDNDNDDEDDDDGPPILSPIVPLPTSTREGEERENCQVNDTRHELTPMVSVPAKAENEMDICELDEIRNEIERSKSSKFPNSEEYCEVGKMEKNSTSDRSLTGMLESESEDGETRAADDRDVEEPTDDDDDARTEAAEHDAGSKIEYEEQSGDSNPGNTYEQCEENRNVEDSVEETYEENSDVEAMEVEVAEEDSEVRIHNLDGTVLVVANDAEGNQILIQRNVSDMANDDSNQEMTQYVYQDGNAYELEGYRIEEHEDDAASPAVEIQEISDDDEAEGGEGEIEIVQGHEESREGEAEGEDGPEENQGDDDSEMDDEATVEEMEGEVEEEEEEREEEEEEADVQTMNISAKSEVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -