Basic Information

Insect: Xiphydria camelus
Gene Symbol: -
Assembly: GCA_963678675.1
Location: OY783201.1:18570452-18579342[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.029 2.4 9.3 1.9 1 23 344 366 344 366 0.98

2 19 0.083 6.7 7.9 1.8 2 23 401 422 400 422 0.95

3 19 0.0052 0.42 11.7 1.5 1 23 497 519 497 519 0.91

4 19 0.00067 0.054 14.5 0.5 1 23 522 544 522 544 0.97

5 19 4.1e-05 0.0033 18.3 2.2 2 23 614 635 613 635 0.97

6 19 0.024 1.9 9.6 10.2 1 23 640 662 640 662 0.97

7 19 0.0026 0.21 12.6 0.5 1 21 668 688 668 692 0.92

8 19 0.0022 0.18 12.8 6.1 1 23 772 794 772 794 0.97

9 19 5.6e-05 0.0045 17.8 3.8 1 23 851 873 851 873 0.97

10 19 0.00039 0.032 15.2 0.7 1 20 878 897 878 899 0.94

11 19 1.4 1.1e+02 4.0 2.2 2 23 910 931 910 931 0.96

12 19 4e-05 0.0032 18.3 0.6 2 23 970 991 969 991 0.97

13 19 3.6e-05 0.0029 18.4 1.6 1 23 996 1018 996 1018 0.95

14 19 0.00015 0.012 16.5 2.6 1 23 1024 1046 1024 1046 0.98

15 19 6.4e-06 0.00052 20.8 0.4 1 23 1062 1084 1062 1084 0.95

16 19 5.2e-07 4.2e-05 24.2 0.6 1 23 1090 1112 1090 1112 0.99

17 19 5.6e-05 0.0046 17.8 0.2 1 23 1118 1140 1118 1140 0.97

18 19 0.00021 0.017 16.0 4.1 1 23 1146 1168 1146 1168 0.96

19 19 0.015 1.2 10.2 0.4 1 20 1174 1193 1174 1195 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.029	2.4	9.3	1.9	1	23	344	366	344	366	0.98
2	19	0.083	6.7	7.9	1.8	2	23	401	422	400	422	0.95
3	19	0.0052	0.42	11.7	1.5	1	23	497	519	497	519	0.91
4	19	0.00067	0.054	14.5	0.5	1	23	522	544	522	544	0.97
5	19	4.1e-05	0.0033	18.3	2.2	2	23	614	635	613	635	0.97
6	19	0.024	1.9	9.6	10.2	1	23	640	662	640	662	0.97
7	19	0.0026	0.21	12.6	0.5	1	21	668	688	668	692	0.92
8	19	0.0022	0.18	12.8	6.1	1	23	772	794	772	794	0.97
9	19	5.6e-05	0.0045	17.8	3.8	1	23	851	873	851	873	0.97
10	19	0.00039	0.032	15.2	0.7	1	20	878	897	878	899	0.94
11	19	1.4	1.1e+02	4.0	2.2	2	23	910	931	910	931	0.96
12	19	4e-05	0.0032	18.3	0.6	2	23	970	991	969	991	0.97
13	19	3.6e-05	0.0029	18.4	1.6	1	23	996	1018	996	1018	0.95
14	19	0.00015	0.012	16.5	2.6	1	23	1024	1046	1024	1046	0.98
15	19	6.4e-06	0.00052	20.8	0.4	1	23	1062	1084	1062	1084	0.95
16	19	5.2e-07	4.2e-05	24.2	0.6	1	23	1090	1112	1090	1112	0.99
17	19	5.6e-05	0.0046	17.8	0.2	1	23	1118	1140	1118	1140	0.97
18	19	0.00021	0.017	16.0	4.1	1	23	1146	1168	1146	1168	0.96
19	19	0.015	1.2	10.2	0.4	1	20	1174	1193	1174	1195	0.89

Sequence Information

Coding Sequence: ATGGACGCTGTAGAGGTAAATACGTCGGGGCCGCCAAGAAATGAGGAAAATATCATGTCCGAGATGGAGATATGCCGTATCTGCCTCCTTGGAAATCTGGTAATGCGAGATCTCTTCCTAGAAAATGAGGTCGCTTCTTTGTCAACCAAGGCGATGAGCTTCGCCAACGTTAAGATGGTACTAGGAGATGGGTTGCCGTCGCAAGTCTGTTGTCTCTGCGCAGACAAActggagtccgcgtacgaattTAAACTGCAGGTGGAACAGGCTGACGGAGTTTTACGAGAAAGATACGATTCCCTGAACATAAAGGAAGAGCTTTTCTTTAACGAAGTTGAAGTGCATTTAGAGACAGATCGTAATGAACACGAGGTCGAAACGATGAATGTGGACGCTCCATATGAAGTTGCTACAGAAATTTTAAGCTCCGACGTTGAAGACGAGAAGCCAACCCTTCTGAAGGATCACCTCGCTCTGTTGCAAGTTGAGAAACTCGCAGAAAAGGAGCAAGCACTAAGCCAAGGTAATAAAGGGGAAGTTGACATGATAAACGAAACGGTTCAAGCTGCCGAACAGGAAAACGAACAGAGTATGGAGCAGGTCGTAGAGATGTTGGAAAGTGTTGAGACCATAAAAACAGAGTATTGCAATAACATGAGCGGAATTTCCGTTGGAGAACACAATTACGTCGTACAACAAGAGTGCGATCTGGTGATGGAACAGGGATATACTGTGGAGAAAACTGTTCCGCACGATCAAGACTTCGCGCAGTATGATTTAACGGCGTCGGTAGAGAAGGATTCGACTACAGAAAATAGACAGTATAACGAGGATTTTTCCAACGCGAAACTCGACGCGATGTCGGAGCAGCCACACGCTCAAAGTGAAACGCGCAGAAGTAAACGCAAGTCTGTACGGCGAGCAGTCGTCGATCACGATTCGGACGAGgagaattatttcgaaaatctCAATCTAAGCTCTAGATTAAAGCAACAGCAAGCCCGAGCGGACAAGACCGACAAGTTATTCTTCGTGTGTTACCTCTGCGACAAACAGTTTCTTTCAAAGGGTGTTTTGAAGGAACACATGCACTCGCACGAAGAAGTACGGAGAACGTTGTCTTTGAAGAAGGCACCGGAGAAACCAAAGCCTGCAGTAGCCACGTCGGTAAGGACGTCACCGTCCGGTAGGAAACTCAACAAGTGCCCCCATTGCGGCAAGGAGTACCTCTACATCATATCTTTCAATAAGCATTTAAAGCAACACGAGAAGAAGGATGCAACGAAGGAAGACGGCATGCCTATCGAGGTTTCTTTTGAGGAAGACGAAGATTCTTTGGACTTCGACCACTCCGAGAGCGCTAAAAATTCGGAATCGAGTTACAAACAAACGGCGAGGACGGAAAAGGAAGAGCGGCTAGATAAAAATGATGGTGGGGAGCAAGAGAGGGAGAAGGGGCGTGGAAGGAAGAAGAGACAAACGGAGGAATACTCGTGCGATAAGTGCGCGGAGAGGTTTTACACGAAACGCGCTTTGCGGAAGCATTCCGTCCAACATGTTCCGTTCAGATGCAGCGTTTGCGATATGGAATTCGATTCTCTGGAGAAATTGAGAAATCATCGATTGGAACACGTCATAGGCGGTGTGTTGACGGAGCAGGATTTGCAGGAGAGCGCAAAGAATGGTCTCCAATGCGAAGACGATGGCAAGAGCGAAAAGAAAGGCGAGGAAGAGGAGCAAGTTGAGGAtgaggaagaagaagacgaagaacaGCAATTTACTGATGATCAGGATAATCGAGGACGAGGAAAGCTGAGGTGGTCCGAGCAGAAAGATCTAAAGTGTCCGAATTGTCCGATGACGTATTCTCACAAAAAGTCGTTGTCCAGGCATTTGGAAACTCACAGCGGCACGAAATACAGCTGTAAAACTTGTTGTCAACACTTCACAAGAAAGGACCACTTGCGGAGGCACATGGAACAACACGGAAGAGTCAAGTCGTTCAAGTGCACACAGTGCAACAAAATCTTCGGGAACGAATTGACGCTGCGAAACCATTTAATAGCGACCAACCACAAGACCATCATACACGGCCAAGAATACGATCCTAATAAACGCATAAAACGCGTGGCTGCGAAAGCTGCTCAAAAAATCATCGACAAGATAAAAACGGAGGGCGAACTCGGGGgtgacgacgaagacgacgacaacgacgatgcCAATGATCGCGATAGTCGTGATAATGATTACGTCGACAACGAGAGATGCGAGAGAACGATCGAATCGTTGAAGAGATCGATTTCTAGAAAAGATTACGAATGCGCGACCTGCAATAGAAAGTGTACTTCGAAACAGTCCCTAACGAAACACATGGAGCACCACGTTAAGGACGAGAAGAGCGAGAAAGGGGAGAAGTCGGAAAAGGCGAAGGCGACCGCTGAAAAGAAAGATCCTCCGAGAGGATGCATCGGCACCAGTACGATCGGTGAAGATTATGACATTGACGAAGACTCCGATTTCGAAGGCGGCCTGTATTGGCCGATGGACAACCATGAGTGCCCGACTTGTAAAAAGCGATACAGCACCAAGAAATCCCTCTTACGACATCAACTTTTACACGAGGAACCAAATTTCGAGTGCGACATTTGCAACGTCAAATTTTACCGTAAGGACAAATTGAAAGCTCACTACGACAAGTGCTCTGAAAAGAATCCGGACCAAGTTAGGAAATGCAATATATGCTGCGATAGTTTCGAGAATAACGAAATGTTGCGCGAACACAGGGCGAGACATGTTACCGAGGGCATTCTAACCGAGGAAGATCTCAGGGAGATCGAACCTCGGCCGGAGGAGAGAAAAGAAGGAGAGAAGATCGCCAGAAAGAGACGAACGGACATAGTGGGACTCGAGTGCACGGAGTGCAATAAACAATACACCTCTCGAAAGGGTCTGTTGCGGCACATTCAGGTGCATGAAGGGAAGAAGTACCTCTGCGACATATGTCCAAAGAAATTTTACAGGCGGGAACATCTCAAGATTCACGTAGCTAAACACAACATGATCAAGCCGTACAAGTGTTCGCGTTGCACGAAGCGTTTCGCGAAGGAGGAACAACTAACGAATCACCTGTCCAAGCACGATCGGACGTTTAAAAAGAACAAAGAGACCGACAGTTCGAAGAGATTCCTCTGCGAGATTTGCTCAAAAAGCTTCACCCAGTCGACCACTTTGATCGCCCATCTCAGAGCACACAACGGCATAAAACCGTACGTTTGTGAGGTCTGTTCCAGGCCTTTTACTACCAACGCGTACCTCAAGATGCACATGAGGACGCACACCCAGGAGCGACCTTACATTTGTCAGTACTGCTCGCGCGCCTTTGCGAGGGCCGATACACTGGCGAATCATTTAACCTCGCACACGGGTGAAGCCAAATACCACTGCAAATACTGTCCGAAAAATTTCCGACGACTCAAATCCCTGAAGGAGCACGTCTTCATCCACACCGGACAGAGACCTTACGCCTGTCCAACCTGCGATCGTAGATTCAACAACAACGGCAGTCGTTACGCCCACAGCAAGAGATGCAAGCAAAATCTGTTGCAGAGCCAGAATCGAAATCAGGGCTTGGAGCAACTTCAAACTCAGGTGCAGCCTAGAATACATCAAAATATCGGTCAAGCGCAAATCGTGAAAACGCAAAATGTCAAGACCATCACTATCGCGAGACCGATCGAAGGAGCGACCACGCAGCAAGTTATGCAGCATCAAGAGATATTGATGCCCTTGATCTTACCTCTTACCGTGACGCTTACGGACGTTGGCGAAGAAATGATACTACCCGAGGGTACAAAGATATTCACCACGTCTTAA
Protein Sequence: MDAVEVNTSGPPRNEENIMSEMEICRICLLGNLVMRDLFLENEVASLSTKAMSFANVKMVLGDGLPSQVCCLCADKLESAYEFKLQVEQADGVLRERYDSLNIKEELFFNEVEVHLETDRNEHEVETMNVDAPYEVATEILSSDVEDEKPTLLKDHLALLQVEKLAEKEQALSQGNKGEVDMINETVQAAEQENEQSMEQVVEMLESVETIKTEYCNNMSGISVGEHNYVVQQECDLVMEQGYTVEKTVPHDQDFAQYDLTASVEKDSTTENRQYNEDFSNAKLDAMSEQPHAQSETRRSKRKSVRRAVVDHDSDEENYFENLNLSSRLKQQQARADKTDKLFFVCYLCDKQFLSKGVLKEHMHSHEEVRRTLSLKKAPEKPKPAVATSVRTSPSGRKLNKCPHCGKEYLYIISFNKHLKQHEKKDATKEDGMPIEVSFEEDEDSLDFDHSESAKNSESSYKQTARTEKEERLDKNDGGEQEREKGRGRKKRQTEEYSCDKCAERFYTKRALRKHSVQHVPFRCSVCDMEFDSLEKLRNHRLEHVIGGVLTEQDLQESAKNGLQCEDDGKSEKKGEEEEQVEDEEEEDEEQQFTDDQDNRGRGKLRWSEQKDLKCPNCPMTYSHKKSLSRHLETHSGTKYSCKTCCQHFTRKDHLRRHMEQHGRVKSFKCTQCNKIFGNELTLRNHLIATNHKTIIHGQEYDPNKRIKRVAAKAAQKIIDKIKTEGELGGDDEDDDNDDANDRDSRDNDYVDNERCERTIESLKRSISRKDYECATCNRKCTSKQSLTKHMEHHVKDEKSEKGEKSEKAKATAEKKDPPRGCIGTSTIGEDYDIDEDSDFEGGLYWPMDNHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICCDSFENNEMLREHRARHVTEGILTEEDLREIEPRPEERKEGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCSRCTKRFAKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQSQNRNQGLEQLQTQVQPRIHQNIGQAQIVKTQNVKTITIARPIEGATTQQVMQHQEILMPLILPLTVTLTDVGEEMILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -