Basic Information

Insect: Xiphydria camelus
Gene Symbol: -
Assembly: GCA_963678675.1
Location: OY783197.1:21921974-21924374[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.4e-06 0.00028 21.7 0.2 1 23 18 40 18 40 0.98

2 18 8.8e-06 0.00071 20.4 2.3 1 23 46 68 46 68 0.98

3 18 0.024 2 9.5 1.0 1 23 74 96 74 96 0.96

4 18 1.7e-05 0.0014 19.4 3.5 1 23 102 125 102 125 0.96

5 18 0.00018 0.015 16.3 1.4 1 23 135 157 135 158 0.95

6 18 8.3e-05 0.0067 17.3 0.2 1 23 167 189 167 189 0.96

7 18 1.1e-07 8.9e-06 26.4 0.7 2 23 196 217 195 217 0.97

8 18 0.00038 0.031 15.2 0.1 1 20 223 242 223 244 0.94

9 18 0.1 8.3 7.6 0.4 3 23 276 297 275 297 0.96

10 18 0.00016 0.013 16.5 1.3 1 23 303 326 303 326 0.98

11 18 1 83 4.4 0.2 2 23 332 354 331 354 0.95

12 18 0.00032 0.026 15.5 0.7 2 23 360 381 359 381 0.97

13 18 0.00023 0.019 15.9 0.4 2 23 388 410 387 410 0.95

14 18 3.1e-05 0.0025 18.6 2.4 1 23 424 447 424 447 0.93

15 18 0.0026 0.21 12.6 0.1 1 23 458 480 458 480 0.95

16 18 0.008 0.65 11.1 1.0 1 23 486 508 486 508 0.94

17 18 6.3e-07 5.1e-05 24.0 1.1 1 23 514 536 514 536 0.98

18 18 0.00032 0.026 15.5 0.2 1 22 542 563 542 563 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.4e-06	0.00028	21.7	0.2	1	23	18	40	18	40	0.98
2	18	8.8e-06	0.00071	20.4	2.3	1	23	46	68	46	68	0.98
3	18	0.024	2	9.5	1.0	1	23	74	96	74	96	0.96
4	18	1.7e-05	0.0014	19.4	3.5	1	23	102	125	102	125	0.96
5	18	0.00018	0.015	16.3	1.4	1	23	135	157	135	158	0.95
6	18	8.3e-05	0.0067	17.3	0.2	1	23	167	189	167	189	0.96
7	18	1.1e-07	8.9e-06	26.4	0.7	2	23	196	217	195	217	0.97
8	18	0.00038	0.031	15.2	0.1	1	20	223	242	223	244	0.94
9	18	0.1	8.3	7.6	0.4	3	23	276	297	275	297	0.96
10	18	0.00016	0.013	16.5	1.3	1	23	303	326	303	326	0.98
11	18	1	83	4.4	0.2	2	23	332	354	331	354	0.95
12	18	0.00032	0.026	15.5	0.7	2	23	360	381	359	381	0.97
13	18	0.00023	0.019	15.9	0.4	2	23	388	410	387	410	0.95
14	18	3.1e-05	0.0025	18.6	2.4	1	23	424	447	424	447	0.93
15	18	0.0026	0.21	12.6	0.1	1	23	458	480	458	480	0.95
16	18	0.008	0.65	11.1	1.0	1	23	486	508	486	508	0.94
17	18	6.3e-07	5.1e-05	24.0	1.1	1	23	514	536	514	536	0.98
18	18	0.00032	0.026	15.5	0.2	1	22	542	563	542	563	0.96

Sequence Information

Coding Sequence: ATGACGAAGCTCGTGGAGCATTTGAAAAACACTCACGGGATCGAACGCGCTTTCAAATGTGACGAATGCGGCAAGGCTTTCAGAAGCCCCATGAATATCGCCCGGCACAAGCTCATCCACACCGGGGCTAAGAAGTTCGTTTGCGATATCTGTGATTACGCCTGCAATCAGAAGACCAACCTGGAATCTCACCGCAGGCGTCATACTAAGGAATACACCCATAGATGCGAGCTTTGCAATAAGGGTTTCCTTTCCAGGTCGGAATATCTGGTGCACGAGTCCGTACACTCGGGCAAGAAGCCCCATCGTTGCGATCTTTGCCAAAAATCCTATTCCTACAAGAACAACTTGTCGGTTCACATGAGACTGCGACATCCTGATCTTGTCGATGCGGCGGACAAATACGATTGTGAACTCTGCGCGCGTACGTTTCCATACAAGAAGCTTCTAGCGCGTCACGCAAAGACGCACCATGGTGTGGTCCAAAACGGAAAGACGTACTTGTGCGATTTATGTGGGAAACAAGTGTCTTCGCAGAGCGTCTTGGTAGCTCACAGACGTACTCATACGGGTGAGAAACCGATGAGCTGCGAGATTTGCGGCAAATCATTCGGCACGCGGGAAAACCTGAAGATCCACAGGAGGACTCATACCGGAGAGAAGCCGCACGTTTGTATGCAGTGCGGTAGAGGCTTTACTCAGAGAACATCTTTAGTGGTACATATCAGCGAATGGACAAACGACCAAGAAGAGTTGGAATTTAAGGTGAAACTCGAAGACATCGATGTCGATCGCTGCTCACAATTCGAAAGCAGTGAAAAAGCGTGTGAACTTTGTAATGAAAAGTTTCACTTCGTAACGAGATTAGTGGCGCATTTGAGGATAGCGCACGGAATACACAGGCCCTTCAAGTGCACTACCTGCGCCAAGACGTACCCTCAACAGTTCATGTTGAATGCTCACGTGAAGAAGTCTCACATGCCGAAGACCGTGCCGTGTGACCAATGCAAATTTATGGGCGTTTCGTTAACGGACGTCGAGCGACACAAGAACCGCATGCATAAGGAAGTTAAGATCACCTGCGAAATTTGCCATGAGCTCTTCACTGAGAGGTCTGCTCTCGAAACTCATACGAACATGCATAGTTTTATGCAGTATCAACAGTGCAACATCTGCGGCAGTACTTTTAACGATGTCTACTCCCTGAAAGCTCACAATCGGTTGTACCATATCACCGCGGCAGTGGTAAAAACCGAGGAATCCGAGCAACATAGCTGCGATATTTGCGAGAAGGTTTTCAAGTATAAGTCGATGCTGAAGCAACACAAGGTGAAGGCCCACGGTAGCACGCCGAATTATGAAAGGCGACGGTATCTCTGTGCTCTGTGCGGTAAGGAACTGAAGACCGCGAAAGGGCTGGAAATACACAACAGGTCGCACACCGGCGAGAAACCGTACACCTGCGAGGTCTGCGGGAAAGGTTTTGCTTGCGAGACTCTCCTCAGAACGCATAACGTAACGCACACTGGCGAACGGAAGTACTCGTGTGATCAGTGCGGCAAAGCGTTTACTCAGAGATCAACGTTAGTGGTACATAAGAGATATCACACGGGCGAAAGGCCTTACGTGTGTCCCAGGTGCAGCAAGGGCTTCGTCACGCGAACCGTTCTCAACACTCATCTGAGATCCTGTCGCTGA
Protein Sequence: MTKLVEHLKNTHGIERAFKCDECGKAFRSPMNIARHKLIHTGAKKFVCDICDYACNQKTNLESHRRRHTKEYTHRCELCNKGFLSRSEYLVHESVHSGKKPHRCDLCQKSYSYKNNLSVHMRLRHPDLVDAADKYDCELCARTFPYKKLLARHAKTHHGVVQNGKTYLCDLCGKQVSSQSVLVAHRRTHTGEKPMSCEICGKSFGTRENLKIHRRTHTGEKPHVCMQCGRGFTQRTSLVVHISEWTNDQEELEFKVKLEDIDVDRCSQFESSEKACELCNEKFHFVTRLVAHLRIAHGIHRPFKCTTCAKTYPQQFMLNAHVKKSHMPKTVPCDQCKFMGVSLTDVERHKNRMHKEVKITCEICHELFTERSALETHTNMHSFMQYQQCNICGSTFNDVYSLKAHNRLYHITAAVVKTEESEQHSCDICEKVFKYKSMLKQHKVKAHGSTPNYERRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKGFACETLLRTHNVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHTGERPYVCPRCSKGFVTRTVLNTHLRSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -