Basic Information

Insect: Xiphydria camelus
Gene Symbol: -
Assembly: GCA_963678675.1
Location: OY783197.1:21854117-21857174[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.6e-05 0.0029 18.4 1.5 1 23 17 39 17 39 0.98

2 17 0.1 8.4 7.6 3.2 3 23 47 68 45 68 0.87

3 17 8.6e-06 0.0007 20.4 3.7 1 23 73 95 73 95 0.97

4 17 0.00021 0.017 16.0 0.7 1 23 105 127 105 127 0.97

5 17 4.4e-05 0.0036 18.2 1.3 1 23 133 155 133 155 0.98

6 17 2.9e-05 0.0023 18.8 0.3 2 23 162 183 161 183 0.97

7 17 2.1e-05 0.0017 19.2 3.6 1 23 189 211 189 211 0.98

8 17 3.8e-05 0.003 18.4 1.6 1 23 358 380 358 380 0.95

9 17 0.00013 0.011 16.7 1.8 1 23 386 408 386 408 0.99

10 17 4.7e-07 3.8e-05 24.4 0.4 1 23 414 436 414 436 0.98

11 17 0.00023 0.018 15.9 0.4 3 23 444 465 443 465 0.97

12 17 1.2e-05 0.00097 20.0 3.5 1 23 470 492 470 492 0.97

13 17 6.5e-06 0.00052 20.8 2.6 1 23 501 523 501 523 0.98

14 17 3.1e-06 0.00025 21.8 1.0 1 23 529 551 529 551 0.97

15 17 5.5e-05 0.0045 17.9 1.3 2 23 558 579 557 579 0.97

16 17 2.2e-05 0.0018 19.1 5.9 1 23 585 607 585 607 0.98

17 17 3.8e-06 0.00031 21.5 0.8 1 23 613 635 613 635 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.6e-05	0.0029	18.4	1.5	1	23	17	39	17	39	0.98
2	17	0.1	8.4	7.6	3.2	3	23	47	68	45	68	0.87
3	17	8.6e-06	0.0007	20.4	3.7	1	23	73	95	73	95	0.97
4	17	0.00021	0.017	16.0	0.7	1	23	105	127	105	127	0.97
5	17	4.4e-05	0.0036	18.2	1.3	1	23	133	155	133	155	0.98
6	17	2.9e-05	0.0023	18.8	0.3	2	23	162	183	161	183	0.97
7	17	2.1e-05	0.0017	19.2	3.6	1	23	189	211	189	211	0.98
8	17	3.8e-05	0.003	18.4	1.6	1	23	358	380	358	380	0.95
9	17	0.00013	0.011	16.7	1.8	1	23	386	408	386	408	0.99
10	17	4.7e-07	3.8e-05	24.4	0.4	1	23	414	436	414	436	0.98
11	17	0.00023	0.018	15.9	0.4	3	23	444	465	443	465	0.97
12	17	1.2e-05	0.00097	20.0	3.5	1	23	470	492	470	492	0.97
13	17	6.5e-06	0.00052	20.8	2.6	1	23	501	523	501	523	0.98
14	17	3.1e-06	0.00025	21.8	1.0	1	23	529	551	529	551	0.97
15	17	5.5e-05	0.0045	17.9	1.3	2	23	558	579	557	579	0.97
16	17	2.2e-05	0.0018	19.1	5.9	1	23	585	607	585	607	0.98
17	17	3.8e-06	0.00031	21.5	0.8	1	23	613	635	613	635	0.98

Sequence Information

Coding Sequence: ATGAACGAGCTGCGAATTCACGGTGTGGCCCACTCttccgaaagaaaatttcactGCGACGTGTGTGGCAATTCCTTCAAACTCAAGTCCCAATTGCTGGCCCACGCGCGACGTCATACCGACGACTACAAAGTGATCTGCAAGCTTTGTGGCAAAGGTTTCCATAACAACAGTGACTATCAGTGTCACAATAACGTCAGGCATGCGGCGATGGACCACGTTTGTCCCAACTGTGGGCGATCTTTCAGGGATGTCTGTCTCCTTAAAAAGCACAGAAGAGTTCACGAACCTGATTACGTGCCGGAAAAACCTCACCAGTGCGAGATCTGCGGTAAGACCTACGTCCTCAAGAAATCTCTGGACATGCACATCGTGAGCCACAGCGGCGAGAAGAAATATACCTGCGATATTTGTGGCAAGAGATTGTGTACCCGCGCCTCGCTGATAGACCATACCAAGCTCCACACCGGTCACAAACCAGTCGTTTGCGATATTTGCGGACGAGCCTTCACGAAGAGGACTACGATGATGGTTCACCGCAGAATACATACCGGAGAACGACCTTATCATTGCGATATTTGCAAGAAGTCATACACTCAAAGGACTAGCTTGGTGATTCATCAGCGCTATCATTCCGGAGAACGTCCTTACGTCTGCAAGTTATCGGCTCGCATCATCAAGAACAAGAGGGGACGACGTCGACGTATTACTACCGATATTAGTCAAGCTGTAAGCCTTCCTCTTAAGGAGGAGATCTTTCAAGAGGAAAAACACACTGTGAGAGACGGGCTCGATCCACTTCCACTATTAATATCTTCGGAAAAGACCGAAACTGTATCGAAAAAGTATCTGGTAGCAGACGAGGAACTGAGCAACTTCAGCGAGAACAACAAATTGGCGATTCAAGGATCTATCCATCCGAAGACAGAAGTCCAGGATCCCCTGATTGCTTGCGATGAATATTCCAATTCCGCAATCGAAGAGAGCGAAGCGTATCACGTGACAGAAGTTGAGATAAGCGAAGTAGCAGAAGATGCTACCTTGCCATCCGATTCTTCCACAAAAAGGGTCTACCAATGCAAGATATGCTCCAAAAGGTTTCGATCGAAAAACTTATTTGAAAGTCATCTGGTGGCTCACAGCGACACCAGGCCCTATCAGTGCGACGTTTGCTACAAGTACTTCAAGAGAACCAACACCCTGGCAGTCCACAAGCGGATACACTCACGCGAGCGCAACTTTGTTTGCGATGTTTGTGGACGCGCTTTCGTTCAAGCCTCGCAATTGGCCACTCACCACAGACGTCATTTCGAGAAGTACACCAGATTCTGTGAAATCTGCAGTAAGGGCTTCTTCACGAATGCTGAGCTGCGCGGCCACATGAACGTGAAGCACGAAGCGAAGGAACACGTGTGTCAAGTGTGTACAAAGTCCTTTCCAAACAATCACACTTTGGCAAGGCACTTGAAGATGCACGATCCGAATTTCAAACCGGTCAAACATCAATGCGAATTCTGTGGCAAGACCTTCTCGTACAAAAATTCATTGGTGGTGCATGTCAAGTCGCATACCGGTGAGAACAAGTACGATTGCCATTTGTGCGGCAAATCGGTGTCCTCTAAGGGCTCGCTACAGGATCATCTGAGGCTTCACGGTGGTGAAAAGTCGTTGGTATGCGACGTCTGCGGCAAGGCTTTCCACAAAAGGACCACCCTGGTTGTTCACAAAAGGACTCATACCGGCGAGAAGCCGTACAGTTGCGACACGTGCGGCAAGTGCTTCACTCAGCACTCCACCCTGGTGATACATAAGCGTTACCACACGGGACAACGGCCCTATCAGTGCAGCTACTGCACCAAATCTTTTGTCTCTAGGGCTCTGCTCAATGCCCATAATAAAGTTCACGTGGTCAGTGTGATGATCGTACAATCGGTGTAG
Protein Sequence: MNELRIHGVAHSSERKFHCDVCGNSFKLKSQLLAHARRHTDDYKVICKLCGKGFHNNSDYQCHNNVRHAAMDHVCPNCGRSFRDVCLLKKHRRVHEPDYVPEKPHQCEICGKTYVLKKSLDMHIVSHSGEKKYTCDICGKRLCTRASLIDHTKLHTGHKPVVCDICGRAFTKRTTMMVHRRIHTGERPYHCDICKKSYTQRTSLVIHQRYHSGERPYVCKLSARIIKNKRGRRRRITTDISQAVSLPLKEEIFQEEKHTVRDGLDPLPLLISSEKTETVSKKYLVADEELSNFSENNKLAIQGSIHPKTEVQDPLIACDEYSNSAIEESEAYHVTEVEISEVAEDATLPSDSSTKRVYQCKICSKRFRSKNLFESHLVAHSDTRPYQCDVCYKYFKRTNTLAVHKRIHSRERNFVCDVCGRAFVQASQLATHHRRHFEKYTRFCEICSKGFFTNAELRGHMNVKHEAKEHVCQVCTKSFPNNHTLARHLKMHDPNFKPVKHQCEFCGKTFSYKNSLVVHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVHKRTHTGEKPYSCDTCGKCFTQHSTLVIHKRYHTGQRPYQCSYCTKSFVSRALLNAHNKVHVVSVMIVQSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -