Basic Information

Insect: Xiphydria camelus
Gene Symbol: -
Assembly: GCA_963678675.1
Location: OY783198.1:19906973-19916082[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00013 0.01 16.7 1.4 1 23 451 473 451 473 0.96

2 18 2.6e-05 0.0021 18.9 1.9 1 20 479 498 479 501 0.94

3 18 4.2e-05 0.0034 18.2 0.7 1 23 507 529 507 529 0.98

4 18 0.0001 0.0084 17.0 4.4 1 21 535 555 535 557 0.95

5 18 3.2e-05 0.0026 18.6 4.6 1 23 563 585 563 585 0.99

6 18 3.2e-05 0.0026 18.6 5.3 1 23 591 613 591 613 0.97

7 18 1.2e-05 0.00099 19.9 7.1 1 23 619 641 619 641 0.97

8 18 1.2e-07 9.7e-06 26.2 2.7 1 23 647 669 647 669 0.98

9 18 8.8e-05 0.0071 17.2 6.7 1 23 675 697 675 697 0.97

10 18 2.7e-05 0.0022 18.8 5.8 1 23 703 725 703 725 0.98

11 18 7.3e-07 5.9e-05 23.8 2.9 1 23 750 772 750 772 0.98

12 18 1.1e-05 0.00088 20.1 7.8 1 23 778 800 778 800 0.98

13 18 3.4e-05 0.0028 18.5 9.1 1 23 806 828 806 828 0.98

14 18 4.5e-05 0.0036 18.2 7.5 1 23 834 856 834 856 0.98

15 18 0.0021 0.17 12.9 8.8 1 21 862 882 862 884 0.94

16 18 1.6e-05 0.0013 19.5 0.4 1 23 890 912 890 912 0.98

17 18 0.039 3.2 8.9 4.5 1 23 922 944 922 944 0.98

18 18 6.3e-07 5.1e-05 24.0 1.3 1 23 950 972 950 972 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00013	0.01	16.7	1.4	1	23	451	473	451	473	0.96
2	18	2.6e-05	0.0021	18.9	1.9	1	20	479	498	479	501	0.94
3	18	4.2e-05	0.0034	18.2	0.7	1	23	507	529	507	529	0.98
4	18	0.0001	0.0084	17.0	4.4	1	21	535	555	535	557	0.95
5	18	3.2e-05	0.0026	18.6	4.6	1	23	563	585	563	585	0.99
6	18	3.2e-05	0.0026	18.6	5.3	1	23	591	613	591	613	0.97
7	18	1.2e-05	0.00099	19.9	7.1	1	23	619	641	619	641	0.97
8	18	1.2e-07	9.7e-06	26.2	2.7	1	23	647	669	647	669	0.98
9	18	8.8e-05	0.0071	17.2	6.7	1	23	675	697	675	697	0.97
10	18	2.7e-05	0.0022	18.8	5.8	1	23	703	725	703	725	0.98
11	18	7.3e-07	5.9e-05	23.8	2.9	1	23	750	772	750	772	0.98
12	18	1.1e-05	0.00088	20.1	7.8	1	23	778	800	778	800	0.98
13	18	3.4e-05	0.0028	18.5	9.1	1	23	806	828	806	828	0.98
14	18	4.5e-05	0.0036	18.2	7.5	1	23	834	856	834	856	0.98
15	18	0.0021	0.17	12.9	8.8	1	21	862	882	862	884	0.94
16	18	1.6e-05	0.0013	19.5	0.4	1	23	890	912	890	912	0.98
17	18	0.039	3.2	8.9	4.5	1	23	922	944	922	944	0.98
18	18	6.3e-07	5.1e-05	24.0	1.3	1	23	950	972	950	972	0.97

Sequence Information

Coding Sequence: ATGAACAGTGAGCAGCATGCATTGCCAGCGACCACGCAGGTACAGCAAGAGGAAGTAAACGCGGGTCAAAGTGGTCATCCTTCGTACCCGGGTGATTTGGCTACCGCGACCAATCTTGGAAATGTAGGGAGTTCCCTTCATTCATCCACGGACCTGCGTGTAGGTAGAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAGTGTTGGATCCTCACCAATCTGTTTCCCGGACCGCTACCCCAGGTCTCGGTGTACCACCATCCCCACCACAACTCCTTGCATAGGAGTGGTGGAGGTGGGGAGGCGTCCTCCAAGGAGTCAGCCTCCTCGTTGTCCCAGGAGATGGCTTTGGCGCCGAGTTCACACCATCAAACGACGTCTTCGCACCATCATCATCAACCTTCGGTTAGCAGCAGCAGTCATCACAATTCTTTGCAGTCGAATGCACAGATCCCAGTCTCTCTTCCTGGTCTGAGCTTGGATGGGACACATATTCCTGCAAGTGTTAGTCACTTGCAGGCAGCACACGCACAAATGCAGCAGCAAATGCAATCGCAACAGCAACAGCTGCAtcaacagcagcaacagcaacaacaacaacaacaggcGCATCATCAGATGCAGAACCATCAAAACGCTCAGAATAGCGGACCAGGCTCTCAGAGCCAAAGCACACAGAGAGACGACCACAAAGTAAAAGACGAAGGTGGGAGTTGTACGACCGAGCGATGCAGTGACAATCAAGTCCATTGTCAGGTTCAGTGCGATCTACAACTTCAAGCGCCGCAAGATTTGCAACAGAGTCTTatgcaacagcagcagcagcagcagcaacaacaacaacaacagcagcagcaacaacaacaacaaattGGTGTTAATATCAGTGGAAATTCCGCGACGGAGGGTGGTAGTCAAAACAATCCTGAAAAATCCGAAAAGAAGGAGGAAATGCGTCAACTCAGTATGGCACAGTTTCAACTGCCAGACTTAAAACCAGGTGGACACATGATGGATGTGAGGACAGCAGACGGTTCGGTCGTTAAAATAAGTGCTGGAAATGAACAAGATCTTGCCAAGACACTAGGCGTCGAGATGGTCCAAAATATGTACAAGGTAAATGTCGAGGACATTAATCAGCTTTTGGCATATCACGAAGTCTTTGGAAAACTGCAAAGTGAAATAGCAGCCGGAACGACATTAGTAGGAGGCACTGTTCCTACGCAAACGGTTACCACTATCCAGAATGGTACGCCGATTGTGCAGCAGGTTCAGTTGAATAAATTCGACATAAAGTCGAGTGACGGCGAGGCAACGCCTGGGCCAAGCGCGTCGCCAGTATCTGTCGGCAGTCATGCCTGCGAAGTCTGTGGAAAGATCTTCCAATTTCGTTACCAGCTTATCGTGCATCGACGATACCACACGGAGCGTAAACCCTTCACGTGTCAGgTCTGTGGAAAGGCATTTTCCAATGCCAACGATCTAACCCGCCATGGGAAGTGTCATTTAGGTGGATCCATGTTCACGTGCGCAGTTTGCTTTCATGTTTTTGCTAATGCGCCGTCGCTCGAACGACACATGAAGCGTCACGCCACTGATAAACCGTACAATTGTACAGTGTGCGGAAAGAGCTTTGCCAGAAAGGAACATTTAGACAACCACACGCGATGTCACACTGGCGAAACACCATACAGGTGTCAGTACTGCGCTAAAACGTTTACGCGTAAGGAACATATGGTGAATCATGTTCGCAAACATACTGGAGAAACTCCACATCGTTGTGATATCTGTAAAAAGAGCTTTACGCGAAAGGAACATTTCATGAACCACGTCATGTGGCACACTGGGGAGACGCCTCACCATTGTCAAGTTTGCGGAAAGAAGTACACGCGCAAGGAGCATTTAGCCAATCATATGCGTTCACACACAAACGACACGCCTTTCCGCTGCGAGATTTGTGGTAAGTCGTTCACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCACACGGGCGAGACGCCGCACCGCTGTGATTTCTGCTCGAAGACGTTCACGAGAAAGGAGCATCTCCTGAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGATTAAATTCCTGTCCAAACGACGAGGTAAAGTTGGAAATGGTTATAAAATGTACAGGGGAGACGCCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACACGTAAGGAGCACTTGACGAATCATGTGCGAATCCACACTGGTGAATCTCCACACAGGTGTGAGTTCTGTCAAAGGACATTCACCAGGAAAGAACACCTTAATAATCATCTCCGTCAACATACCGGAGAATCGTCGCACTGTTGCAACGTTTGCTCCAAGCCGTTCACGCGAAAGGAACATCTCGTCAATCACATGAGATGTCATACCGGTGAACGCCCATTCGTTTGCACAGAGTGCGGCAAGAGCTTCCCGCTGAAGGGCAACCTCCTCTTCCACATGCGTTCGCACAATAAAGGAAGCAACGCGGAGAGACCTTTCCGTTGCGATCTTTGTCCGAAAGACTTTATGTGCAAAGGACACTTGGTATCGCACAGACGATCGCATTCTGACGAGCGACCTCACAGCTGTCCTGATTGTGGCAAGACCTTCGTTGAGAAAGGCAACATGCTTAGACATTTACGAAAACACGCGGCTGAAGGACCACCCACGCAAGTCAGCACACCTTCGGCGATTCCGCAACCTGGTGGTGTTTTGCCGATACCAGCCGCCGCCGTCTTGGTTGGTCATCCATTGGCACCGCCAGCACCGCCCGTAGTGCCCCAACATACGGTGGTCGTGCCGACTCCACCCGGCGTACTAGCTTCGTATTAA
Protein Sequence: MNSEQHALPATTQVQQEEVNAGQSGHPSYPGDLATATNLGNVGSSLHSSTDLRVGRAVALASSVAKCWILTNLFPGPLPQVSVYHHPHHNSLHRSGGGGEASSKESASSLSQEMALAPSSHHQTTSSHHHHQPSVSSSSHHNSLQSNAQIPVSLPGLSLDGTHIPASVSHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQAHHQMQNHQNAQNSGPGSQSQSTQRDDHKVKDEGGSCTTERCSDNQVHCQVQCDLQLQAPQDLQQSLMQQQQQQQQQQQQQQQQQQQQIGVNISGNSATEGGSQNNPEKSEKKEEMRQLSMAQFQLPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGLNSCPNDEVKLEMVIKCTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGESSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQPGGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00899003;
80% Identity: -