Xcam005269.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xiphydria camelus
Gene Symbol
ZNF236
Assembly
GCA_963678675.1
Location
OY783193.1:70931-84951[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1e-05 0.00081 20.2 0.9 2 23 187 208 186 208 0.96
2 28 0.00012 0.0094 16.8 0.3 1 23 214 236 214 236 0.97
3 28 1.1e-05 0.00085 20.1 0.3 2 23 242 263 242 263 0.97
4 28 0.011 0.86 10.7 0.2 3 23 271 291 269 291 0.96
5 28 0.0001 0.0084 17.0 1.0 2 23 302 323 302 323 0.98
6 28 9.3e-07 7.5e-05 23.4 1.3 1 23 344 366 344 366 0.99
7 28 2.4e-05 0.0019 19.0 0.8 1 20 372 391 372 394 0.94
8 28 0.00017 0.014 16.3 0.3 3 23 402 423 401 423 0.97
9 28 0.033 2.7 9.1 1.6 3 23 434 455 432 455 0.97
10 28 3.1e-06 0.00025 21.8 2.0 1 23 566 588 566 588 0.98
11 28 0.00025 0.021 15.8 2.1 1 23 594 616 594 616 0.99
12 28 0.0091 0.73 10.9 3.1 1 23 622 644 622 644 0.98
13 28 0.00019 0.015 16.2 3.0 1 23 648 670 648 670 0.98
14 28 0.00049 0.04 14.9 3.6 1 23 725 747 725 747 0.98
15 28 6.5e-05 0.0053 17.6 5.0 1 23 753 775 753 775 0.99
16 28 8.2e-06 0.00067 20.5 1.1 1 23 781 803 781 803 0.98
17 28 0.00015 0.012 16.5 7.2 1 23 809 831 809 831 0.98
18 28 0.0014 0.11 13.4 3.6 2 23 1155 1176 1154 1176 0.94
19 28 0.0083 0.67 11.0 2.2 2 23 1201 1222 1200 1222 0.97
20 28 0.00012 0.0095 16.8 2.9 1 23 1228 1250 1228 1250 0.99
21 28 1.8e-05 0.0015 19.4 0.4 2 23 1255 1276 1254 1276 0.96
22 28 1.5e-07 1.2e-05 26.0 1.4 2 23 1348 1369 1347 1369 0.98
23 28 0.039 3.1 8.9 4.8 1 23 1375 1397 1375 1397 0.97
24 28 7.1e-06 0.00058 20.7 2.5 1 23 1403 1425 1403 1425 0.98
25 28 0.00047 0.038 14.9 3.8 1 23 1431 1453 1431 1453 0.99
26 28 0.00036 0.029 15.3 1.9 2 23 1662 1683 1661 1683 0.97
27 28 0.0001 0.0085 17.0 4.9 1 23 1689 1711 1689 1711 0.98
28 28 1.2e-06 9.9e-05 23.1 3.5 1 23 1717 1740 1717 1740 0.96

Sequence Information

Coding Sequence
ATGCTTACCGAACAGACGATTTACGCAGAATCCTCGTCCACTGGTACTGATCATGATGTACCATTCGGATTTGTTATTTCTGAAGACGGACGTATGCTCCTGACGATGATGGAACGTGATGACGGCGCCGTCGATCTAGTGACGGTTCCAGTCGCGTTAATGCCTCAGAATAACAGCACGATGGTACAAAACTCTGTTAAAGTATCCAATGAAAATGTCATCCTCAACTCGCCTGTATTTCAAATAAGTCTCGAAGATATACCCAGTGTGGGTGTACAGCAACCAAATTTATTCCACGCGGAATCCTATCGGACGATACCCACAGTTGCAATTGAAATAGATGGATCTAATGCTATAAAAGAAGTGGACACGGAAGCAACAAATGCATCACTTGCCGTGGCATCTGTTCCGAGTACAGAAAGAACAGATTTATCTAAAAGAGAAGACGAGTCTGAATCTGGCAAATCCTCGCCTGCTAGGAAAAATATCACGAAGAGAAGTCCTGGCAGGCCAAGGAAAGACGGGACAACACCACCTTCAAACGTCACAAACTATCTTAAATGTGATATTTGCGGGCAAAGCTTCAACAGACAGATGCTTTATCGGAGGCACATGGAAAATCACGCTGAGGAGAAACCGCACCGATGTCCAAAGTGTCCTGCTTCTTTTAACGTTCCTACAAATTTCACGCTTCACATGGCTATACATAATACTGGTGAACCGAAATGTCCCGAGTGCGGTAGGAAATTTGCGAGAATGGCCAGCTTGAAGTCCCACATGCTCCTGCACGAGAAGGAGGAGAATCTTTTTTGTACCGAGTGCGAAGATGCATTTTCAACCAAGGCTCAATTGGACGCACATTTGAAACTTCACAACGAGAAGTGGTCAAGCGAGGATGTGCGGAAATGTAAGCTTTGTAACAAGCAATTTACTCAACCTGCCCTGTACCGTTTGCATATTCGAGAACACTACAGGTTGCAAACTAAAATAATGAAGCAGACTAAAAGGGGAACGAAACATAAGACGATGTACAAATGTAAAATATGCTTGAAGTCTTTCCAAAAACCCAGTCAGCTAATGCGGCACATCAGAGTGCATACGGGTGAAAAACCCTTCAAGTGTACGATTTGCAGCCGAGCATTTACGCAAAAAGGTTCACTGCAGATTCACATGTGGAAGCACAACGGATTTCGACCTCACGGCTGTAGCTTTTGCAATGCTAAATTTAGTCAGAAAGGAAATTTAAACGCCCACATTCTCAGGGTGCATAGCGTTTCGGAAGGCGAGCCAACATACGGATGCAATTATTGCGCGTGCATCTTTAAAAAGCTGGGAAGTCTCAATGGCCACATGAAGAGGATGCACTCAAACCCCATAGAGGAGAAATCTAAAGGAGAGAACTCTACCGAAGCTGATATGCAGGCAACTGTGGACACTGTCATGTCTCAGCTGGCTTCTTTGGAATCTAGCGTAGAAAATAGCGAATCGGTTGCCATCGCAAAGAACGACATCCTGCAGCAAGCACTGAAGAATAGCGGATTGCCGAGCAAAGATAAGAATTGTACAACAGATACATTGCCGTCGAAAAAGGGCGAAGCGCAGACGACGTTTGTGACGCTATTGGACAGGAGTACCGACGGGTCCATGAGACGATACGTGACTATCAAACAACGGAGCATCGGGAGCATGAGATGGTACGCGTGTTCATTCTGTCATAAAGAATTTAAGAAACCATCGGACCTCATCCGCCATTTGCGTATACATACACAAGAGAAGCCCTTCAAGTGTTCGTACTGTTTCCGTTCGTTCGCCTTAAAATCGACAATGATGGCACACGAACGTACGCATACCGGTACAAAGAAATATACGTGTGGCTCGTGCGACAAAACGTTTGCCTGTCACAGCAGTCTCACTGCCCACGCAAGATTGCACACCAAACCTCACAGATGCAACGCGTGTGACAAGTCCTTCAGTTCGAGTACCGTCTTAAGGAATCATCTCAAGAGCCACGCGAAGGGAAAGATCAAAATATCTCCCGAGGCGGAAGTCCTGGTGCCGCAGATCGTTCTCGACGAACCGCTGGTGATCAGCGATTCGGGAAACAAGATTAGCGTGGCGCAGGTGCGATCCAAGGAGCGACAAGTTTACAATAATGCTGACATTGCGAGGCCGCATAAATGTTGGGTATGCCCTGCGGCGTTTCGAAAAATCAGTCATCTAAAGCAACACTATCGCAGGCACACGGGAGAGAGGCCTTACAAGTGTCAAAAATGCGACAGGAGGTTCACATCGAACAGCGTGTTGAAATCTCACCTGCACACTCACGAGGACACGAGGCCGTACAGTTGTTCCATGTGCGGTGCAAAGTTTTCAACGCAGAGCAGTATGAAACGACATTTGGTTACGCATAGCAACAAAAGGCCGTTCATGTGTCCGTACTGTCACAAAACGTTCAAGACTTCTGTCAATTGCCGAAAGCACATGAAGATCCATAAACACGAACTCGCCCAGCAGCAATTGGATCAACAAAAGACGCAACAGCGCACACAGCTACCTTCGGTCGAAGAAGAGCGAGAAGTTTCAACGTTAGTCAACGAGAACTCGCTGGCACTAACCAACGAGATGGATGTGACGTTTCAACCACAAATGGCGCCAGATTTTAGCCAAGCATTCTCCGATCAGTTTCAAACAATCTCGGTGGATAAGGATAAATCGTATTTGTCCCAACAGAGTACCACTCAACCAGTTGTCATCCAAAATCAAGCCGAGGTCGATGCGGTCACTCGAGGAACGTCCCAGACTCTACACGCCGATGAAACGGGCACTATCACGTTACCGAACTACTCCGGAGATCAAACGCTTACGCCGGAAAGCATACGCGAAATAGAGGAAACGTTGAATCAACAGCTCTTCAATATCGGAATGAACCTCGGTATGGAGAATGGCCTGACAAGGCACGATAACGTTTCCAATTCGCTCGAAACTAGAGAGCAGCCTGTATTGAATATCATTTACGATAGCGGCAAGAGCTTGGAACCTACCAGCGAAAGCGGTACGATCAATGCCAATGCATTTCCCTCTCAGTTCGATACCTTCGACATGAGTCAAATCACGCTTCAGGCAGATACCGAAATGGATATCGGTATCAGTTCGGCCAATTCCACGAGCATGGCGAGCATTTTACCGAGATCCGCTCAGGAGGAACACCGTCTCGTCTCCGTCACCGCAAACAACGTCGCCGAGGACAATCAGGCAAAACAGTCGAGGCATCTAGTGGTCGTGAGTTCCGTGCATACTTGCCCCGAATTGTCGCGACCCGTTCAAGCGTGTCCGAAGTATTCCAAAGTGATAGCGAAAGCCGATACGACCGACAATTCGGATACGCAGGGCGCGGAGATCAGACAAAGAGAAGAGACTCGGAATTCCTATCTGGTCACATCTGATCAACGTGTTCCTTCTTTAACATGTGGCGTGTGTGACAAGCATTTTCAAAGGCACTCGCAACTGAAGGCCCACTCGAAAGCGCACGTTTCGTCCGAGGCTGGGAAACCCGATACCAATGAGATGGTGGTACCAGTTGCCGAATCGGATTCCCGGTTGCAATGTCACATGTGCAGCAAGAAAGGGTTTACCGCGGCAACATTGAAAGAGCATCTGAAGACCCATCGGGGAACAAAAGAATTCCAGTGCACAGAATGTTCTTTGAGATTTTGCACCAACGGCGGACTCAGCAGGCATCTAAAGATGCACGCGAGCAAACTGCAGTGTTCCGTGTGTGACAAGACGTTCCCAAGCAAGGCGCAGCTAAACTCGCACAGCCAAGTGCACGACGTCGATTGGAGCACGGATTCGGTAGAGCCCGACAGCTCTCAAAAGGAGCCGTTAACCGTAGATTCGAATTACTTGCTGATCACAGAAGTGAATGCCGAAGGTGGTACGGACTCCGCGGTATCTCAGAAGGTTTTAATGGACACCGTAGCGGAAACGGAGACGACGGATCAACGATTAAATGGTCAAATTGAGAGGAAGGAATACGTGAACAAATGCAAATACTGCCCGAAAACGTTTCGAAAGCCGAGCGATCTAATTAGGCACGTTCGTACTCACACGGGTGAACGGCCGTACCAGTGCGAGTATTGCAGTAAGAGCTTCGCCGTCAAGTGTACTTTAGACTGTCACATGCAGGTCCACACCGGCAAGAAGACTTTTTCGTGTCACGTTTGCAACACCTTCTTTGCGACCAAAGGAAGTCTAAAAGTTCATATGCGTCTACACACAGGCTCAAAACCGTTCAGATGTTCGATGTGCGACCTGAGATTCCGGACCTCTGGGCATCGAAAAGTTCACCTGCAGACACACACGCGGGACCAAAAAGCTGGTTCGAAACGCAAGTCCAAACAATTGAAGGTCTCGGCAATCGCCGGAGTAGCGGCCGAATTGGAAAGAACCGTCGAAAGTACAGCTGATACGGAAACCACGACGACCAATCGAGTATCACGCGCAGCGGAGCTTCCGAGCTTGGATTCCATTACGATCGACACGAGCGGACTCTCGGACCAGATCACTTTCAACGCGGATGGAACGATATTGAACAACAACTCGATACTCAGCATTAACGAGAGTACCCAGCTCGTTGCTAATCTACACTTCCTCATTGCCAACGGACTCGTCACCATTCAGGCTGACGAAACGTTGATGCCTCAGTTGTCGAGTACCGCGGACGCGAACGAGCCGCGAAACGAAACGATTGCGGGTGAATTGATGACGCCGGAAACGCTCGAACGCGTATCCTGCGCGAACGAGAATCCGGAAAGTCTCGTGATGACGTCGGAAGCACCGGTCGATTCGGTGACCGATCAAACTCAATCATTGGGCTTGACGGATTGCGCGACGGTAGTACAAATTAACGATATCGACACTCCTTTCGACAAGATCGAACTCGTCAACGCGAAACCCACTGCCAAAGTAAGTCAGTCGAAAAAGGAATGCGATATATGTGGGAAAACGTTCATGAAACCGTGTCAGGTAGAGAGGCACAAACGCATTCACACCGGTGAACGACCGTACAAGTGCGGCTTGTGCTTCAAGTCCTTCGCGCAAAAGTCCACGCTGAAGATGCATCAGAAACACCACACCGGCGATCGACCGCACCCTTGCCCGCATTGCGACTACTCGTTCACACAAAAGGGGAATCTACGAACGCATCTCAAGCGAGTTCACCAACTGGACACACTCGAAGTTAAAAAACTGCGGAGGGGGCAACAAGTtttgagcgcgaaattattgcAGGACAATATTGACGACACTAGGACATTGAGCTTAGACGATATTTCGTTTGTCGATCTTCTCAGATAA
Protein Sequence
MLTEQTIYAESSSTGTDHDVPFGFVISEDGRMLLTMMERDDGAVDLVTVPVALMPQNNSTMVQNSVKVSNENVILNSPVFQISLEDIPSVGVQQPNLFHAESYRTIPTVAIEIDGSNAIKEVDTEATNASLAVASVPSTERTDLSKREDESESGKSSPARKNITKRSPGRPRKDGTTPPSNVTNYLKCDICGQSFNRQMLYRRHMENHAEEKPHRCPKCPASFNVPTNFTLHMAIHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWSSEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIMKQTKRGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCTICSRAFTQKGSLQIHMWKHNGFRPHGCSFCNAKFSQKGNLNAHILRVHSVSEGEPTYGCNYCACIFKKLGSLNGHMKRMHSNPIEEKSKGENSTEADMQATVDTVMSQLASLESSVENSESVAIAKNDILQQALKNSGLPSKDKNCTTDTLPSKKGEAQTTFVTLLDRSTDGSMRRYVTIKQRSIGSMRWYACSFCHKEFKKPSDLIRHLRIHTQEKPFKCSYCFRSFALKSTMMAHERTHTGTKKYTCGSCDKTFACHSSLTAHARLHTKPHRCNACDKSFSSSTVLRNHLKSHAKGKIKISPEAEVLVPQIVLDEPLVISDSGNKISVAQVRSKERQVYNNADIARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCDRRFTSNSVLKSHLHTHEDTRPYSCSMCGAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLDQQKTQQRTQLPSVEEEREVSTLVNENSLALTNEMDVTFQPQMAPDFSQAFSDQFQTISVDKDKSYLSQQSTTQPVVIQNQAEVDAVTRGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGMENGLTRHDNVSNSLETREQPVLNIIYDSGKSLEPTSESGTINANAFPSQFDTFDMSQITLQADTEMDIGISSANSTSMASILPRSAQEEHRLVSVTANNVAEDNQAKQSRHLVVVSSVHTCPELSRPVQACPKYSKVIAKADTTDNSDTQGAEIRQREETRNSYLVTSDQRVPSLTCGVCDKHFQRHSQLKAHSKAHVSSEAGKPDTNEMVVPVAESDSRLQCHMCSKKGFTAATLKEHLKTHRGTKEFQCTECSLRFCTNGGLSRHLKMHASKLQCSVCDKTFPSKAQLNSHSQVHDVDWSTDSVEPDSSQKEPLTVDSNYLLITEVNAEGGTDSAVSQKVLMDTVAETETTDQRLNGQIERKEYVNKCKYCPKTFRKPSDLIRHVRTHTGERPYQCEYCSKSFAVKCTLDCHMQVHTGKKTFSCHVCNTFFATKGSLKVHMRLHTGSKPFRCSMCDLRFRTSGHRKVHLQTHTRDQKAGSKRKSKQLKVSAIAGVAAELERTVESTADTETTTTNRVSRAAELPSLDSITIDTSGLSDQITFNADGTILNNNSILSINESTQLVANLHFLIANGLVTIQADETLMPQLSSTADANEPRNETIAGELMTPETLERVSCANENPESLVMTSEAPVDSVTDQTQSLGLTDCATVVQINDIDTPFDKIELVNAKPTAKVSQSKKECDICGKTFMKPCQVERHKRIHTGERPYKCGLCFKSFAQKSTLKMHQKHHTGDRPHPCPHCDYSFTQKGNLRTHLKRVHQLDTLEVKKLRRGQQVLSAKLLQDNIDDTRTLSLDDISFVDLLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-