Basic Information

Gene Symbol
ncor1
Assembly
GCA_963678675.1
Location
OY783192.1:38231487-38258133[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-09 1.2e-06 29.0 0.0 3 43 640 680 639 683 0.96

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAGCAAGTCCAGGTAGTGAGTGGATTGGGGGTGGGGGGCCCGGTTGGCCCTGTGGGCCCCGTGGGGGGAGATCTGCATCACCATCACCACCCCCACCCCCACGGCGGCCACGGCCACTCGCTAGTCACGACGGCCACCCCCGCCAGAGGTCAGGCCCAATCGCATCAGCCCCAGCCCCCACCCCAGCACAATCAGCATCTACCATCGAGGTCCACTCCGGTTCAGCTGCACAGGCCGACCCAGAGCTACATCAACATCAAGAGCAGCAGCCCCGTGTCGCCGAGAGCCGTAGGGGGTTCCTACGTGCAGAACGTTTCGGGAGCGCCGTCCGCGGGTGGCGCGGTGGGGCCTCCAGGTGGTAGCGGCAATGCCGGTGCGgcgggtggcggcggcggcggcgcgggtGGCGGTTACGTCGCCGTCCCCGTGCCCGGCGGCCTGCGATATGTGCATCCCTATCCCCCACCACCGCCCCAGGCTCCATCCGCCCCGGTGAATCAGACTCCACCCCCGCCGGGGGCAGCGGCTGCTTATACGAGGGACGCCTATCGAAATGCCACCTCGAACGTAAATGAAAGGGTTGCCATCAGCGTCAGTAGCAGCCCCGTGTCGCAGGTGGGGGTCGGGGTCGGAGTCGGGGTCGGGGTCGGGACTGGCGAATACGTGGTTAGCAGTAGAGCGGATCGACCACGAATATCGTTGCTTCCACCCTCATCGGTAGCGCCTGCACCCTCGCCTACCGCTCCTGAATATCATGTCTCAGGCCCGAGGAATACCCGGGGCCTGATACCCATGCAGACCGAGCAGTACTGCAACAGGGCTATGGAAATGGCGACTCTGCAGGAGGCGCCGCCTTTCAAGAAAATCCGCCTGGGACAGCCTCAGTCCCAGTCGCAGTGCGGCCAGACTCTGTCGCCGGCTGACGCTTGCGTCAAGCAGGAGCACGTTCAGGCGCAACAACCTCTGAGGATAGATACGAGGGAGCAGCCTTCGGCAGGTGCTTACACGCCTCAGACCGAAGCGATATCGCCGACCCTACCCGAGCCCAGCACGCAGGAGGATGCCCAGTTCAGGAGCACCAAGGACGATCTGCTCCAACAGATCGCCAAGGTCGACAGGGAAATCGCCAAGAGGGAGTCGCAAATCAGTAAACTCAGGAAGAAGCTGAAGGAGCTGGAGGAGATCGCGAACAAACCCTTGGAAGCGACAGGACTGAAGCGTCAAGTGGAAGAACAGTCGCGTCAACCGAAGCACCAGTCGCTGGCCCAAAAGATTTACGCGGAGAACAGAAAAAGAGCGGAAGAGGCGCATAGACTCTTGGACAGGCTCGGTCCGAAGGTGGAATTGCCACTTTACAATCAGCCCTCGGACACCAGCGTGTACCAGGAGAATCGTACGAGGCACCAGACCTGCATGAGAGCGATACTCGTTGCGAGGTTGCGCAGGGAGCACGCGGAGCGTGCGTCCCTTCACCGTCAGCAGTCGCAAACGTACGCCATTCTCGTGCAGGAATGGCATCGCAAGGTGGAGCGGCTGGAGGCGACGCAGAAACGGAAGTCGAAGGAGGGCAAGAATCGTGAGTTCTTCGAGAAGGTATTTCCCGAGTTGCGAAAGCAGAGGGAAGATAAAGAACGCTTCAATAGGGTTGGCGCTCGCATCAAGAGTGAAGCCGACGTCGAGGAGATCATGGAGGGTCTGCAGGAGCAGGAGGAAGAAATATCGCCAGAGTTAAAAAATGCCATTAAAGCTCGTCAGATGGAGGACAAGAAGATGCGTTCGTACGCGGTGATTCCTCCCCTCTTATTGGACACGAAACAGAGGAGGATCGCGTTCCAAAATCGGAACGGTCTCCTGCAGCCAGAAGAGCTGGAGGCTCTGCACAGCGAGCGCAAGTTGATCAATGTGTGGAGCCCGATGGAGCACGAGCTCTTCAAAGAAAAGTACCTTCAGCATCCTAAGAACTTTGGAGCGATAGCCCAGTCCCTCGAGCATAAATCCGTCGCCGATTGCGTGCAACATTACTACCTCACCAAGAAAGCCGAAAACTATAAGCAGTTGCTGAGAAAGACGCGACACCGGGCGCGCAGCCTTCGGAACAATCCCAACAACAAAATAAATAACAGCAACTCCAATGTCGGGCCTATAGACATACTAACGATAGGTGTCACGACAAGGCTGCAACGTGAGCAGCAACAGAAGACACAGGAGAATCCCCATCACAAttccacgacgacgacgacggcgacgacgacgacggcaacgacgacgacgacgacgacgtcggcaTCGGCATCGAGTACTTCCGCGACGACGACAaccgcgtcgtcgtcgacgacCACCTCTACTTCGGCGGTAAGTACGCCTTCGAACGCGAGTACGTCAACGGAAGCGACGGCGATAtccacgacgacgacggcgaccaCCACCATCCCGAGTTCTACCGCGACAACGAGCGTCGTAATCACTGCGCCGACGTCCAGCATAAAGGACGCCAGAGAAGCGAATAAGGAGAACAAGGAGAACAAGGGGGATTCGAAGGACTCGCTGGTCGTGAAGGATGCCAAGGAGGAATCTCAATCAAGTTCGGAGACTGCCTCGGGGAAAGATGGGAAAGTGACGCTAGACAACAAAAGTACGTTACTGTTGTCGACGAACACCAGTTTAGCGAACACCACGTCTATACAGACGGACTCCAAGGAGAAGAAGAAATCGGGGAACGTTAGCGGGAGCGGAACGAGTTGCGGTAGAgggaaggagaaaaagaaggaaaatcACGCGACTCCCATGGAAACCAGCGACGAGGAGGCGCAGTCAGTCGAGACCATTGGTGAGTTTTGttaa
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHPHPHGGHGHSLVTTATPARGQAQSHQPQPPPQHNQHLPSRSTPVQLHRPTQSYINIKSSSPVSPRAVGGSYVQNVSGAPSAGGAVGPPGGSGNAGAAGGGGGGAGGGYVAVPVPGGLRYVHPYPPPPPQAPSAPVNQTPPPPGAAAAYTRDAYRNATSNVNERVAISVSSSPVSQVGVGVGVGVGVGTGEYVVSSRADRPRISLLPPSSVAPAPSPTAPEYHVSGPRNTRGLIPMQTEQYCNRAMEMATLQEAPPFKKIRLGQPQSQSQCGQTLSPADACVKQEHVQAQQPLRIDTREQPSAGAYTPQTEAISPTLPEPSTQEDAQFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEEIANKPLEATGLKRQVEEQSRQPKHQSLAQKIYAENRKRAEEAHRLLDRLGPKVELPLYNQPSDTSVYQENRTRHQTCMRAILVARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKEGKNREFFEKVFPELRKQREDKERFNRVGARIKSEADVEEIMEGLQEQEEEISPELKNAIKARQMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSPMEHELFKEKYLQHPKNFGAIAQSLEHKSVADCVQHYYLTKKAENYKQLLRKTRHRARSLRNNPNNKINNSNSNVGPIDILTIGVTTRLQREQQQKTQENPHHNSTTTTTATTTTATTTTTTTSASASSTSATTTTASSSTTTSTSAVSTPSNASTSTEATAISTTTTATTTIPSSTATTSVVITAPTSSIKDAREANKENKENKGDSKDSLVVKDAKEESQSSSETASGKDGKVTLDNKSTLLLSTNTSLANTTSIQTDSKEKKKSGNVSGSGTSCGRGKEKKKENHATPMETSDEEAQSVETIGEFC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01364584;
90% Identity
-
80% Identity
-