Xcam017514.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- -
- Assembly
- GCA_963678675.1
- Location
- OY783198.1:22442572-22444368[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-07 0.00016 21.8 0.0 3 36 13 47 11 53 0.91 2 2 6.3 1.4e+03 -0.4 0.0 21 34 99 112 98 118 0.80
Sequence Information
- Coding Sequence
- ATGTTAGCCAAAAAACCGAGACACATCTGGAGCACGGAGGATATGAACAACGCCGTATTAGCGGTTAGAAATAATGAAATGGAAATGATGGAAGCGGCGCAATTTTTCAACATTCCGCATTTGACGTTACACCATAGAATTGTAATGGAAGATTTCGAAATGTCCCACCATTCAGTTCGCAGGAAATTCGGCTTACCGCCGATAATTGAAGAAATGCTCGTATCCAACTGCTTGATAATGGAAAAACGCCATCAGATCGGTGTCACCGTTAAAGACATCCTGCAAATGGCGATCCAGCTGGCCGAAAAGTATGAACTTCCCCATCCCTTTCTCAAGAAAGACAAGAGATCAAAATGGGGGTGGGTCCGAGGTTTTCTGAGTCGCCATCCCGACTTAACGATCTGCCAAGCCAGAGCGACGTCGGTAGACAGAGTAAAGAACTTTGGATCCGAGAAAGTGAAACAATTCTTCGACATTTACGAATCGCTCTTGGAGAAGATCGATCATGCCGCCGATCGTTTGTACAGCTGCTACACGACGGGACTCTCCGTGAACCATCGTAAAACTCCAAAAGTGTCATCTTACAAGACAAAGACGATAGTCAACCTGCTACCGGGCGCCGAAAGAGAGTCCTTTCTCTCCATCCTGACTTGCATGAACGCGGCGGGTCGTTTCATTCCCCCTCTTTTCGTGTACTCGAAAAACCACGTGACCCCGCCTTTATCAGCGGGCATTCCTTCCGGGGCAATCGCCCTGGCCCAAAAATCTGCCTGGGTCGAGATCGAGCACTTCAAAAAGTGGTTTCACCAGTTCCTAGAATACGTCAAACCGTCGAAGGAAACTCCGGTGCTCATGCTGTTGGACGGGCATTACGATTATACGGAGGACAAGGAATTAATTGCTTTTGCGCTGTTGAACGGCGTGCATTTGGTGCCTCTACCGAAGCACAGCTTGCACGTGATGCAACCGCTGGAACTGTCACTCATGCCACCTTTGAAGACATTTTACGAGCAAGAGGTCAACGAGTGGATCGGGACGCATTTGGGAATGGTGTCTCACAATGACGTTGCCTATTTGCTGGGTAAGGCCTATTCGAAAGCCGTCAAAGTCGCAATGGACGATGATGCTTTTCGGAAATGCGGATTATTACCCTGTAACAGAAACACTTTCGGCAAAGCATTTCCTGAGCCGGAAAACGTAAACAAACCAGCCGACAGATCCGTAAACTATTTGATCATCGTCGACTCTGCCGTTCAAGGACCGAGTGGCGCGCAACCCTTCATTTCTTTTCCTGACGTTGCAGACATCATGATCCCGAATAGCGATCCCGACCTGAAAATCGTCCATGAACAAGCTACAACGACTGCCAAATCCATTCCAAGCCCAAAACCCTCAGCTTCGTTCTCTGATGTCAATCCTGACGTTCCGTGCGGCGAGACCCTTAAGACTGATCCCGATCTAGAAATCGTCTACGAACTGGCCGCAACGGCCGCGTTCGATTCATCCGCCGTCGACCCCCTCGTTTCAGATCCAAGCGATGCACGATTCTCAACCTCGTCGGCTGATATCCAAATCCCAGAGAGTGATCCTGATTTGGAAATCGTCTACGAACTATCCGCAACAGCCACGAATGATTCGTCCGCTGTCAACATCCTCTGTCCAGATCCAAGTGGCACGCAATCCTTAGCTACGACTTCTGATATCAGCTCCGACGTTCCCGTGACACCCTTCCTCTTCTGCAGTTGCGATCCCCTTTCGGACGTGAAACAAGAGACTCGCAAAAAGTCTCGCActtag
- Protein Sequence
- MLAKKPRHIWSTEDMNNAVLAVRNNEMEMMEAAQFFNIPHLTLHHRIVMEDFEMSHHSVRRKFGLPPIIEEMLVSNCLIMEKRHQIGVTVKDILQMAIQLAEKYELPHPFLKKDKRSKWGWVRGFLSRHPDLTICQARATSVDRVKNFGSEKVKQFFDIYESLLEKIDHAADRLYSCYTTGLSVNHRKTPKVSSYKTKTIVNLLPGAERESFLSILTCMNAAGRFIPPLFVYSKNHVTPPLSAGIPSGAIALAQKSAWVEIEHFKKWFHQFLEYVKPSKETPVLMLLDGHYDYTEDKELIAFALLNGVHLVPLPKHSLHVMQPLELSLMPPLKTFYEQEVNEWIGTHLGMVSHNDVAYLLGKAYSKAVKVAMDDDAFRKCGLLPCNRNTFGKAFPEPENVNKPADRSVNYLIIVDSAVQGPSGAQPFISFPDVADIMIPNSDPDLKIVHEQATTTAKSIPSPKPSASFSDVNPDVPCGETLKTDPDLEIVYELAATAAFDSSAVDPLVSDPSDARFSTSSADIQIPESDPDLEIVYELSATATNDSSAVNILCPDPSGTQSLATTSDISSDVPVTPFLFCSCDPLSDVKQETRKKSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -