Xcam007749.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- -
- Assembly
- GCA_963678675.1
- Location
- OY783194.1:6291628-6296243[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-12 2.1e-09 37.5 0.1 3 40 20 57 18 61 0.88
Sequence Information
- Coding Sequence
- ATGCCTActcactataaaaaaaaatctggcAGCACTCCGAGGCGGCAATGGCGGCAAGAAAGTCTCGAAGAAGCAGTAGCAAAATTAAATTCTGGAGAAATGGGCGTAAACGAAGCGGCCCGTGCGTATGGAATTCCGTCGCGAACATTACGAAGAAGAAGGCGTCAAGGCGTTACTCCTGTTCTATCTCTTGGGCCCCAGGGTGTTTTGGGaatagaaaatgaaaaacggcTAGTAAAACACGTTCAAAAATTAGAAAAGGCCGGCTTTGCTCCGGACAGGGAGACCCTGCGGACATTAGCCTTTCAATTTGCAGAAAAGTTGGGAATCAACCACCGATTTAACCGTGAAACAGGTATGGCTGGGTACGATTGGCTTAGCTTATTTCTAAGGAGAAATAAAGAATTAAGTATTAGGCAATCACAAGGATTATCTCTTGCTCGAAGCCAGGGAATGAACAGGGAAGAAGCTAAACAGTTTTTTGACTTGCTTCACGAGTGTTAtattgaaaacaatatttttgttaaaccgGAAAACGTATTTAATATGGATGAAACCGGTTTCCAATTAAATAACGAAGCCGGTACTGTGATAGCTACTAAAGGGGCTAAGGATGTCCATACTCTAACGTCGTCGGAAAGAGGTGAAAATATCACAATCATAGCTTGCTGTAGTGCCGAGGGAAGATTTCTCCCACCAGTGGTCATATTTAAGGGGCAACGGGAAAAGAAGGAATTTGGAGATGGATTACCTTCAGGTGCCAAAGTTTTCATGAATCAGAAGTCATCTTATATTACTGCGGAGTTATTTCTGAAGTGGCTTAAGGAACATTTTGTTCCTCGTAAACCTCCCGGAAAAACCATTTTAATTTTAGATGGGCACTCTTCCCACACTAATTCGTTCGAAATGCTGGGGTATGCTGAGGAAAAtgatattattttaatttgCCTTCCTAGCCATACCACCCAAGCGCTTCAGCCGCTTGACAGGGCATTTTTTAAATCCTTTAAATATAACCTAAAACGAGAAGCTCAACAGTGGATGAAACATCACCCAGGAAGACAGCTTAAGAGACTGCAGGCAGGTCAATTAATTGGAAAAGCATGGGAAAGATCTGCATCAGTTGAAACTGCTCTTTCAGGATTTAGAGCGACAGGAATATTTCCTTTAGATCCCGATGTCATTCCTGATCATTTTTACGCCATAGCTGATGTTGCATCTTCGGCCAACGTTAAAACCGTTACCTCGTCTACTGTAAATGATGAACGACAATCACCAATTCCGGGGCCATCAAGAGAGCAAAATCCAAAAAGTCAACACTCTAAACATCCAACGCAGATCAACAGTGCTTCTCAGATAGATCaaacaaaagaaaaagaaacgccGAGCAAATTTCTTGATGAAATGTCTCCTGTTCCAGTCAGTCAACCGCCCCAAAGGAAAAGGAAAAAACAAACAGCACAAATTCTAAATGAGAAACCTTATTTGGGAAATCCCGATCTGGACTTGATTAGGTTCTGA
- Protein Sequence
- MPTHYKKKSGSTPRRQWRQESLEEAVAKLNSGEMGVNEAARAYGIPSRTLRRRRRQGVTPVLSLGPQGVLGIENEKRLVKHVQKLEKAGFAPDRETLRTLAFQFAEKLGINHRFNRETGMAGYDWLSLFLRRNKELSIRQSQGLSLARSQGMNREEAKQFFDLLHECYIENNIFVKPENVFNMDETGFQLNNEAGTVIATKGAKDVHTLTSSERGENITIIACCSAEGRFLPPVVIFKGQREKKEFGDGLPSGAKVFMNQKSSYITAELFLKWLKEHFVPRKPPGKTILILDGHSSHTNSFEMLGYAEENDIILICLPSHTTQALQPLDRAFFKSFKYNLKREAQQWMKHHPGRQLKRLQAGQLIGKAWERSASVETALSGFRATGIFPLDPDVIPDHFYAIADVASSANVKTVTSSTVNDERQSPIPGPSREQNPKSQHSKHPTQINSASQIDQTKEKETPSKFLDEMSPVPVSQPPQRKRKKQTAQILNEKPYLGNPDLDLIRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01537785;
- 90% Identity
- iTF_01537785;
- 80% Identity
- iTF_01537789; iTF_01537791;