Xcam022130.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- klhl21_1
- Assembly
- GCA_963678675.1
- Location
- OY783201.1:11795762-11798193[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-06 0.0009 19.4 0.0 2 38 199 235 198 241 0.86 2 4 5.1e-10 1.1e-07 31.9 0.0 3 39 250 285 248 292 0.85 3 4 0.7 1.6e+02 2.6 0.0 21 34 319 332 305 337 0.80 4 4 6.9e-10 1.5e-07 31.5 0.1 4 39 363 398 360 402 0.93
Sequence Information
- Coding Sequence
- ATGTCCGAAGTTGACAATCAACGTGAAATCGATCAGAGCTACTGTTTCAAATGGAACGACTACCAGAATCATTTATCGGGTGTAGTTCGTCAACTTTTAGAGGAGGATTGCATGGTGGATGTTACGCTTTCTGTAGCTGGAGAACGCATTCATGCCCATCGTATCGTATTGTGTGCTTGTAGCACGTTATTCCAAGATGTACTTAGCCAAGTCAACGAAGATCATCCGACTATAATACTGAGTGACATATCCGCACAGGACGTAAGATCCATCATCGACTTCACTTACCACGGAGAAGTGAGCATCCCTGTGGAGAATATTAGCAACTTATTAGATGCGGCGCACTCTCTGAAGATATGCGGCTTAATGGAGATCGACGGTCTGGATGAAAATGAGACTGTAGCGAGTACGAAGGATTTCAGCGAAGATGTAGAGCCTTCAACGGATCCGATTGAAGCCGTGGAGAAGGTTTTCCGTACGCTGGAAAAAGAATTCGACAATGCATACGAACAATCGGAAGAAAGCATATCAGAAGCGTCTTTGACGAATAAGAAGAGACGGCGACGAAGAGACATGGTTAAAAAGGAGTACAGTGAAGATATGTTGACAGCAGCGATAAACGATCTCCGAGCGGGGCAAACGTTAATAGAAGCTgctactaaaaataatataccaCGTTCTACTTTGTACATGCGGGCCAAGGCGTTGGGTATACACTTGAATGCATCGAGGAATGAATATTCCGCAGAGTGCATGAAAGCGGCTATAAATTCTGTGATCGGGGGTTCCAGTTTACAACATGCTTCAGAGGTGTTTAGCATTCCTAAAACCGTATTGTGGCGGCGGATTCAAAAGGAGGGTTACCAAATCCTGCGTTCGGAGATGAAGAAGTCGTACGGTTCCGATAAGAGGGAAGCCGCGGTTAAAGCATTGGAAAGGGGGGAAAATCTTACCAAAGTTGCCCTTGAATTTCAAATACCGAAAACTACGCTTTTTAGAGATAAGGCTAGACTGGTCGACGAGGGTAAATTACCGTTGTCGTTCTGGAAGAAGCGTAAGACTGAAAACGAAGAATTGAAGAGACTGCGTTTAGAGGAGGCGGTGGCCGCCTGTAAGGGCGGTAAGATGTCGCAAGCCGCGGCCTCGTTGACTTATCGAATTCCAAAGACAACGATATGGAGAAGGCTCCAACAGGATGGCAAAACGCCGAGTCGAGCGACGGACGACGATAATCAACAGCAAAGACTGGATAATTCAGTGGACAGTACCGGGGAAAAGTCTCGGCCAGGATCAGAATTTGGATTTTGCGAGGTTTCTTCGGAAATTCCAATAACGTATATAGACGAGAATAGTATACCCGAAGATTCGGTGATTATTTTGACGACAGACGACGTAAGTGGCATCGATTTGGGAGAAGGTAGACAAATAATCGTTAATTCGGAGTCAGGACAATACGTACCCTGCGCTTTGTCAATTGAAGAAAACTCGACATACACACCGGCCGAAAGTTAG
- Protein Sequence
- MSEVDNQREIDQSYCFKWNDYQNHLSGVVRQLLEEDCMVDVTLSVAGERIHAHRIVLCACSTLFQDVLSQVNEDHPTIILSDISAQDVRSIIDFTYHGEVSIPVENISNLLDAAHSLKICGLMEIDGLDENETVASTKDFSEDVEPSTDPIEAVEKVFRTLEKEFDNAYEQSEESISEASLTNKKRRRRRDMVKKEYSEDMLTAAINDLRAGQTLIEAATKNNIPRSTLYMRAKALGIHLNASRNEYSAECMKAAINSVIGGSSLQHASEVFSIPKTVLWRRIQKEGYQILRSEMKKSYGSDKREAAVKALERGENLTKVALEFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKRLRLEEAVAACKGGKMSQAAASLTYRIPKTTIWRRLQQDGKTPSRATDDDNQQQRLDNSVDSTGEKSRPGSEFGFCEVSSEIPITYIDENSIPEDSVIILTTDDVSGIDLGEGRQIIVNSESGQYVPCALSIEENSTYTPAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538095;
- 90% Identity
- iTF_01538095;
- 80% Identity
- iTF_01538095;