Xruf009486.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- nfxl1
- Assembly
- GCA_963966045.2
- Location
- OZ014493.1:39086271-39090873[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 5.5e+04 -5.0 1.9 15 19 165 169 165 169 0.85 2 18 0.15 4.1e+03 -0.5 0.8 4 10 200 206 199 206 0.95 3 18 3.2e-07 0.0088 17.6 17.6 1 19 214 231 214 231 0.99 4 18 1.7e-06 0.047 15.3 16.5 1 19 267 285 257 285 0.88 5 18 1.4 3.7e+04 -3.6 1.0 6 10 310 314 309 314 0.88 6 18 3.7e-08 0.001 20.6 10.8 1 18 320 337 320 338 0.98 7 18 0.0003 8.3 8.1 14.8 1 18 373 390 373 391 0.97 8 18 0.36 9.9e+03 -1.7 0.6 1 5 400 404 400 409 0.89 9 18 5.6e-05 1.5 10.4 17.1 1 18 425 442 425 443 0.94 10 18 9.2e-11 2.5e-06 28.9 12.9 1 18 452 469 452 470 0.97 11 18 0.00016 4.4 9.0 5.8 10 19 519 528 516 528 0.90 12 18 0.047 1.3e+03 1.1 4.5 4 12 540 548 538 548 0.89 13 18 2 5.5e+04 -5.1 3.1 14 18 576 580 576 581 0.86 14 18 2 5.5e+04 -5.5 4.3 10 16 599 608 598 611 0.59 15 18 1.7e-05 0.45 12.1 4.2 1 11 617 627 617 628 0.96 16 18 1.6e-06 0.044 15.4 18.2 3 19 662 678 661 678 0.94 17 18 2.2e-06 0.061 14.9 12.3 1 18 721 740 721 741 0.90 18 18 0.96 2.6e+04 -3.1 0.9 6 10 771 775 770 775 0.89
Sequence Information
- Coding Sequence
- ATGAGTGAATTTAGTAAAGGTTCTAAAAAGCAACAAAATGCCTGGAATAACACTCCTCGTTTAAGAAAATCATTTTCTAACCTACAAAAGTCGCCGACATCATCtgaagaaaaatttaaagaagCTCAAAAAAAGTTGCAAGCTGCTGTTCAGAAACACGTTAAATCTTACGAGTCCTCTTCAGATGAAGAAGATCTGACATCGGAAAATGTAATTAGTAACATTTTAAAAAGTTATCAAGAAACCGGGAACGATGAGAAATATTTAGAACGAACACAGGGTTTTTTAGAAGACAATCTACATTCTGGAGCTTCCACATGTTTGATCTGTATTTCCAGAATAAAACGCACTGATTCAGTATGGAACTGCAGCTTTTGTTACTGTTCTTTTCACGTAAGATGTATCCAGCGATGGTCCAAAGATACTATAGTACAGAAGAAGCTTGCTTTAGAAGAGCAAGTTCAAATTCAACAAATAAAATTACTGTGGGGCTGCCCCAAATGCAGACATGATTATACTCCTGATGATATACCAGATACTTATAGGTGTTATTGCCAAAAAGTGGTCAATCCAGAATATCAACCATTTCTGGCACCTCATTCTTGTGGTGAAACGTGCGGTAAACTACTCAAACCTGCATGTGGACATCAGTGTGTTCTACTCTGCCATCCAGGTCCTTGCCCACCTTGTCCTAAAACAATCAGCGTACCATGTTACTGTGGTTCAAAGCCACCAAAATTAATGAGATGCAGTAATAAAGAGTGGTCTTGTGGCCAACCCTGCGGGAAACCATTAGCTTGCGATAAACACAAGTGTGGTGAAACTTGTCATTCAGGAGAGTGTAACCCTTGCCCTAAAAAGAGCGTCCAAAAATGTTTGTGTGGGGCTAGCCAGAAATTGAGAGACTGCAGCACACCCCTTTGGCAGTGCGATAAGGTTTGCAATAAACCCTTGTCTTGTGGCAATCACGTTTGTTTAGAAAAGTGTCACATAGGTGACTGCGAACCTTGCGACCTGAGTAAGCCGAGGACTTGCCCTTGTGGCAAATCCAAATTTGAATTACCGTGTACTGAAGACACTCCTCCTTGTGGTGATACGTGTCTCAAATTATTAGAATGTGGTTTACATATTTGCCATCAACGTtgccataaagaaaaatgtGGACCTTGTTTAGAAACAATTACCAAATCGTGTCGATGTGGCTTACACACAAAAGAAGTTCAATGTAGAAAGCCGTATTTTTGTGAAACGAAGTGTAAGAGAATGAAAGATTGCAATAAACATCCTTGCAACAGAAAGTGCTGCGACGGAAATTGTCCACCTTGCGAGAAACCATGCGCGAGATCTTTGAGTTGTGGCAACCACAAGTGTAGCTCAGTTTGCCATAGAGGACCATGTTATCCCTGCAATTTGACTGAAACTGTTTCTTGTAGATGTGGAGATACACAAATTACAGTTCCTTGTGGGAGAAAATATAAAACTCGGCCACCAAAGTGCCTAAAGCTTTGCAAgCTTCCACCTGAGTGTCACCATGAAAAGCAGGAAGACCACCGGTGTCATTTCGGAGACTGTCCTCCTTGTAGACAAGTTTGTAATAAAGAACACGGGGATTGCTTACATCTTTGCCCAGCTCCATGTCATTCATCAGTGCTTGTGAAACTTCAGGCACAGAAGGCTTCTATGCCTTGGGAAGCCACAGGACCTCAAGAAGAGAAGAGATTGCTGCCATGTCCAGATTGTGCAGTGCCAATTCCTGTTACTTGCTTTGGGAAACACGAAACTGTTGATTGGCCTTGTCATTTGGCCAGACCTGGCAGCTGTCATAAGTCTTGTGGACGCATTTTGTTGTGTGGAAACCACGCTTGCAGTCTTCCTTGTCACGTTGTTGAATTAGCTGAAGATGACGTGAAGGCTGGAGCAAACTGTGAGGTTTGTGAAAATGGTTGTACTAAACCAAGACCCGAGCCAAGACCTGATGGTTGTCAACACCAGTGTCCTAAGCCATGCCATTCAGGAGATTGCCCACCGTGTAAGCAAATGCTTCGCATTAAATGCCACTGCGGGTTAAATCAGCCTTATGTTGCTTGCCACGAGTGGACTTCTTCAGATAAGAAGGAAGAATTGCAGAGCTGTGGCAACCAGTGCCCTCTCAACTTTGATTGCGGTCATCGCTGTCGGGCAAACTGTCATTCAGGCCCTTGTCCCAATTCTGAGAGTTGTAAAAAGAAAGTCAAAGTGTTTTGCAGTTGTAAACGCATTAAAAAAGAATTTCAGTGCGAGACTGTTCGCAAAAATTTGGCTGTTGTCGAGTGTGATGAAGTTTGCTTACAAAAACAAGAAGAGGAGCGGAAGAAAAATGAGTTATTGAATGAGCGGAAGAAGAAAGAGGAAGagactaaaaataaaatagaattggAGAGGTACGAGAAAATGTTCCaacagaagaagaagaatagAGAAAGGAGGGTTTTGAGAGATGATAATCAAGAAGGTTTCTTCATGAGATATAGAGTTGCTTGTGGTGTTTCTATTGCACTGATTGCATGTGTTGTTTATTATGTGATAGCATAA
- Protein Sequence
- MSEFSKGSKKQQNAWNNTPRLRKSFSNLQKSPTSSEEKFKEAQKKLQAAVQKHVKSYESSSDEEDLTSENVISNILKSYQETGNDEKYLERTQGFLEDNLHSGASTCLICISRIKRTDSVWNCSFCYCSFHVRCIQRWSKDTIVQKKLALEEQVQIQQIKLLWGCPKCRHDYTPDDIPDTYRCYCQKVVNPEYQPFLAPHSCGETCGKLLKPACGHQCVLLCHPGPCPPCPKTISVPCYCGSKPPKLMRCSNKEWSCGQPCGKPLACDKHKCGETCHSGECNPCPKKSVQKCLCGASQKLRDCSTPLWQCDKVCNKPLSCGNHVCLEKCHIGDCEPCDLSKPRTCPCGKSKFELPCTEDTPPCGDTCLKLLECGLHICHQRCHKEKCGPCLETITKSCRCGLHTKEVQCRKPYFCETKCKRMKDCNKHPCNRKCCDGNCPPCEKPCARSLSCGNHKCSSVCHRGPCYPCNLTETVSCRCGDTQITVPCGRKYKTRPPKCLKLCKLPPECHHEKQEDHRCHFGDCPPCRQVCNKEHGDCLHLCPAPCHSSVLVKLQAQKASMPWEATGPQEEKRLLPCPDCAVPIPVTCFGKHETVDWPCHLARPGSCHKSCGRILLCGNHACSLPCHVVELAEDDVKAGANCEVCENGCTKPRPEPRPDGCQHQCPKPCHSGDCPPCKQMLRIKCHCGLNQPYVACHEWTSSDKKEELQSCGNQCPLNFDCGHRCRANCHSGPCPNSESCKKKVKVFCSCKRIKKEFQCETVRKNLAVVECDEVCLQKQEEERKKNELLNERKKKEEETKNKIELERYEKMFQQKKKNRERRVLRDDNQEGFFMRYRVACGVSIALIACVVYYVIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -