Xruf038997.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- stc
- Assembly
- GCA_963966045.2
- Location
- OZ014501.1:2683716-2708708[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.7e-05 1 11.0 17.1 1 19 18 36 18 36 0.98 2 13 3e-08 0.00082 20.9 8.6 1 19 76 94 76 94 0.99 3 13 0.95 2.6e+04 -3.1 1.3 6 10 124 128 124 128 0.96 4 13 0.015 4.2e+02 2.6 19.5 1 19 139 156 134 156 0.87 5 13 0.52 1.4e+04 -2.2 2.0 5 10 185 190 185 190 0.93 6 13 0.0017 47 5.7 9.3 1 11 196 206 196 207 0.96 7 13 0.022 5.9e+02 2.2 1.1 4 10 211 217 210 217 0.92 8 13 2.1e-09 5.9e-05 24.6 13.2 1 18 223 240 223 241 0.97 9 13 0.22 6e+03 -1.0 1.3 5 10 269 274 269 274 0.92 10 13 0.00037 10 7.8 13.1 1 19 280 297 280 297 0.76 11 13 1.2 3.4e+04 -3.5 0.4 9 11 315 317 315 318 0.74 12 13 1.5e-09 4e-05 25.1 9.6 1 18 333 351 333 352 0.93 13 13 0.051 1.4e+03 1.0 15.1 3 19 363 381 362 381 0.92
Sequence Information
- Coding Sequence
- ATGACAGAGCATACCTACCTATCAGAAGGAAACTGTAACAAACTGCTTGAATGTGGCGTTCATCATTGTCCGCTAAATTGTCATGGAGGTGAATGTGCACCCTGCAAGGAATTTTTGAAGCAAGAGTGCTTTTGTGGAAACGTTGGAAGGAAAGTGCCTTGCTCTGCAGAACATAGAGGTGCAACCAGATATGAATGTGGAGAAATTTGTAGGAAAACATTACTGTGTGGTAATCACAAATGTGAACGATTCTGCCACGATGAGCTATGTGCTACTTGCCCACTTTCTCCAAATTTAATAAAGTTCTGCCCTTGTGGAAAAACTTTGCTAACCGAAGTTAGATACTCTTGTCTCGATCCAATTTCGTGCTgcgaaaagATTTGCCAAAAACGATTGAAATGTGGTCAGCCAGGCTGTTCCCATTTATGTGGAAGTCCTTGTCACATAGGAACATGCCCACAATGTCCTCGTACCACTTTAATAAAATGCCGTTGTGGTCACATGGACAAAGAAATCGCATGTGTGTCTTTAACTACTAAAGCTGATGATGCTAGATGTGAGAAGAAATGTACTAAGAAACGGTCCTGTGGGAAGCATAAATGTAATCAACGATGTTGCATTGATATAGAGCATACATGCCCTCTCCCATGCAATCGACAACTCTCTTGTGGACTTCACAGGTGCCCATTAACTTGTCATAGTGGAAAATGTCCACCATGTTTGGAAACCAGCTTTGAAGAATTGCAGTGTGAATGTGGTGCTAGTGTTATCTATCCTCCAATTTCTTGTGGCACTAgacctccaaaatgcaatcaaccATGTTCAAGACCCCGCCTGTGTGGTCATGATGTTAACCATAATTGTCATACTGGACCATGTCCCCCTTGCACTGTTCTATGCAAGCGCTGGTGCTTGGGGCACCATGAACAGAGAGCTGCAATACCTTGTCATCAAGAAAATTTTAGTTGTGGCTTACCCTGTGGCCAAGATTTGCTCTGTGGCCAACATAAATGCATACATCTATGTCATGCTGGAGATTGTCCTTCTGTTTGTAAGCAGCTATGTACTGAATTAAGGACAAGTTGTGAACATATTTGTGGAGCACCATGCCATGAACCCCCATGTCCTGACACCCCATGTAAGCATATGGTAAAAGTTACATGTCAGTGTGGTTTACGTATCAGCAGTCGACCATGCATAGAACTTACTAGTGAATACCAGAGAATTGAAATGGCTAATCTTGTTTCCAAGATGGCAGAGATGCAAAAAGGGTATACTGTTGATATTTCCGATATCGTTAGCAATCAGCGAAAACCTGTGGGATCTTTAAAAACGTAA
- Protein Sequence
- MTEHTYLSEGNCNKLLECGVHHCPLNCHGGECAPCKEFLKQECFCGNVGRKVPCSAEHRGATRYECGEICRKTLLCGNHKCERFCHDELCATCPLSPNLIKFCPCGKTLLTEVRYSCLDPISCCEKICQKRLKCGQPGCSHLCGSPCHIGTCPQCPRTTLIKCRCGHMDKEIACVSLTTKADDARCEKKCTKKRSCGKHKCNQRCCIDIEHTCPLPCNRQLSCGLHRCPLTCHSGKCPPCLETSFEELQCECGASVIYPPISCGTRPPKCNQPCSRPRLCGHDVNHNCHTGPCPPCTVLCKRWCLGHHEQRAAIPCHQENFSCGLPCGQDLLCGQHKCIHLCHAGDCPSVCKQLCTELRTSCEHICGAPCHEPPCPDTPCKHMVKVTCQCGLRISSRPCIELTSEYQRIEMANLVSKMAEMQKGYTVDISDIVSNQRKPVGSLKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -