Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014493.1:43823725-43837291[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 3.5 2.8e+02 3.8 0.0 2 23 99 120 99 120 0.92

2 21 0.0056 0.45 12.6 0.9 2 23 251 275 250 275 0.89

3 21 0.3 24 7.2 6.4 3 23 285 306 285 306 0.98

4 21 8.9 7.2e+02 2.5 0.2 1 23 308 331 308 331 0.93

5 21 0.002 0.16 14.0 2.0 1 23 333 355 333 355 0.96

6 21 0.077 6.2 9.0 0.3 1 20 401 420 401 422 0.94

7 21 0.083 6.7 8.9 1.3 1 23 473 495 473 495 0.95

8 21 0.13 10 8.3 0.1 5 23 765 784 759 784 0.88

9 21 2.3 1.8e+02 4.4 1.5 2 23 787 808 786 808 0.93

10 21 0.51 41 6.4 0.3 5 23 866 885 864 885 0.92

11 21 0.027 2.2 10.5 0.7 1 23 918 941 918 941 0.96

12 21 0.0013 0.1 14.6 0.1 3 23 972 992 971 992 0.95

13 21 0.28 23 7.3 0.3 1 20 1102 1121 1102 1123 0.95

14 21 0.15 12 8.1 0.7 3 23 1330 1350 1328 1350 0.94

15 21 0.094 7.5 8.8 0.1 5 23 1455 1474 1453 1474 0.92

16 21 1.1 86 5.4 1.4 3 23 1509 1529 1508 1529 0.97

17 21 0.002 0.16 14.0 1.3 2 23 1532 1553 1531 1553 0.96

18 21 5.2 4.2e+02 3.3 0.9 3 21 1566 1581 1565 1583 0.68

19 21 1.1 86 5.4 0.6 1 14 1595 1608 1595 1612 0.85

20 21 0.00015 0.012 17.5 1.2 1 23 1623 1645 1623 1645 0.98

21 21 0.13 11 8.3 4.4 1 23 1651 1673 1651 1674 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	3.5	2.8e+02	3.8	0.0	2	23	99	120	99	120	0.92
2	21	0.0056	0.45	12.6	0.9	2	23	251	275	250	275	0.89
3	21	0.3	24	7.2	6.4	3	23	285	306	285	306	0.98
4	21	8.9	7.2e+02	2.5	0.2	1	23	308	331	308	331	0.93
5	21	0.002	0.16	14.0	2.0	1	23	333	355	333	355	0.96
6	21	0.077	6.2	9.0	0.3	1	20	401	420	401	422	0.94
7	21	0.083	6.7	8.9	1.3	1	23	473	495	473	495	0.95
8	21	0.13	10	8.3	0.1	5	23	765	784	759	784	0.88
9	21	2.3	1.8e+02	4.4	1.5	2	23	787	808	786	808	0.93
10	21	0.51	41	6.4	0.3	5	23	866	885	864	885	0.92
11	21	0.027	2.2	10.5	0.7	1	23	918	941	918	941	0.96
12	21	0.0013	0.1	14.6	0.1	3	23	972	992	971	992	0.95
13	21	0.28	23	7.3	0.3	1	20	1102	1121	1102	1123	0.95
14	21	0.15	12	8.1	0.7	3	23	1330	1350	1328	1350	0.94
15	21	0.094	7.5	8.8	0.1	5	23	1455	1474	1453	1474	0.92
16	21	1.1	86	5.4	1.4	3	23	1509	1529	1508	1529	0.97
17	21	0.002	0.16	14.0	1.3	2	23	1532	1553	1531	1553	0.96
18	21	5.2	4.2e+02	3.3	0.9	3	21	1566	1581	1565	1583	0.68
19	21	1.1	86	5.4	0.6	1	14	1595	1608	1595	1612	0.85
20	21	0.00015	0.012	17.5	1.2	1	23	1623	1645	1623	1645	0.98
21	21	0.13	11	8.3	4.4	1	23	1651	1673	1651	1674	0.95

Sequence Information

Coding Sequence: ATGTTATCTTTAACGGTGCCTTACGTCATTAACTCCGTTCAAAATTCGAGACAACTACCATATAATAGCTTTATTATgGCGATCGCACCAGAGACGATCACAGAAGATATAGTGGAAACTGAGGACCATGTATATCAGAAGTGCAAAGGCAAATTTTCTCAACAGTTGGTTCTTGACTGTTGTAAGCAAGCTGATGGTGAGGAATTAGATAATTTAGATTTTTTGGAAAGTGAAACTAAGCAAGTAAACGTCATGCATTGCTCAAAGGGATTCCTGAACCCTAGTGAGGTTAATGTGTGTCCCTTGTGCTACGATACTTTTGAAACCGTAGAAGACTTGGAACAACACGAAATCTTTCATAAGGAAGTTGAGTCCTCAAATGAATTCGATCAAGGCCCTAAATTTGCAGTGTCTGATGGCATTGATCATGAAAAGACAGGTTGTAAGAGTGTATCGCAGTTAAGCACTGGGGTCAAGAACGATAAAGAATCTGCCAACGAATCACGTTATGGCTGCTCTGCTTGCAAAGCAACAAGCAGTAATATGCGAGATATAAGGAATCATATTTTCGTGCAACATGAAAATGGCTGTTCGAAATGTTATAAACGGGAAATATTATGTGTGTTGAAGAGCGAAGAGTATGAGGACATGATGGGTGAATACGAAAATTCGAATCTAGTTGAGGAAACAAAAGTTATCTATGTGCGGAAGAGAGAGACTGATGATAAGCACTACAAGAGTGATGAAATAACTTGCTGGTGTATTTATTGCAACAAAACGTTTGCTAGACCTCCGTTTTTAAAGAAACATTTAGATCAAGTTCATTTTTCAATCAGGAAAACTCGAGTGGGTTGTCATCTTTGCCAAACATCTTACTGTAGCGAGCATTCTTTGAATAGCCATATTTTAAAGGAACACAAATTCGTTTGTACGTTATGTATGGATATGTTTCCAAACAAATTGGAGTTACAGGATCATTCAAAAATACTTCACATTTTTACGTGCCAAATTTGCAACAAAGGGTTTAAAAAATTACGAAAGCTGAGACTCCATACCGAACTCCACAATTATCAAGGGACAAACAAAATGAAATGGAAAAAGGCTCACTATATGAGCGGTACTTTTCTACATAATCGCAGTCTCGTGAAAAGACATTATAAAAAGTCGACGAAGGACCAGAACATCGGAGAAAGTGAGAAATTTTCTTGCGATAAATGTCAAACAACGTTTATGCGCCGCATATCCTACGATAGGCATTTAATTGCTTGTGGCAAGCGAGACACTGGTTACGTCTGCGGTTATTGCATTTCCAAATTTACTGCGTACGGCGTTtacaaaaaacattttaaagaaTGTGCAAGAAAATGTAAagaaatttttggggaattgAACATTCAAAGTAACAAAGAATCAATACATGCTTGTACAAAGTGCTATGATGCTTTCGAAACACTGGAAGATTTGAGGAAACATTTGTCTTCGCATGAAACTGCTGAATTTTATGCTAGCAACGCATTTGGGACAACACCAGTTTTCCTTAACGAAAAATACGTAAACGAGGAAGAACTCCAAATAGATCCTTTGGCCTCCAGCtatggttatttgaataaaaatgaaaataattttaacattgaaaactTTGAGAAACGCAAAGAAACCCTAGAGGAAGACGAAGAGTTCCTAATCACAAAACGAAATGAATTGCAAACTGCGTGTTCTGAAAATTTGGATAACCAAAATAAATcgataaaaaatgaaatatttctagTAGAACCCAAAAGAGAAGAGAATTCAGAGGAGATTGAAGAAATCAGAACTTCGAACCTCAAGCTTAAAATTGTGGATGACCTAGAAGAAACAGTTTCATGTGATGAAGTTGACAAATATGAAGCACCTACAAATCCGGAAGAAGGTCAAGAAATAAGAACTATAGTCACGATTAAAATTGAAGATGATCTTGTTGAAGAATCATATTCAGATGGTGTTGACGCAGAAGAATATGAAGCATCGGCTGATTATAGCGAAGATGTTGAGAGTTCAGAGGTAAATGAAATTGTCAATTCTGAAACTGAAGATGACATTGAAGAAACAAATTCCACCACAGAAGGAATGGAAAAAACAAATTATcatgatgaaaataaaaaatttcatgaATTCTACATGAAGCTGCGGGGCAATATAACAAGTTGCTATTGTGTATGTTGCACGAAATCTTTCCTGTCACCGATTAAATTCAGAAATCACGTGAACAAAAAGCACTCGTTTTTCAGAATACCGTGTTATGGatgcattttgtgcaaaaagGAATACTCTACCAGCGTTACTCTAGCTGTACATATTCTAATAGAGCATGAGCATGCTTGCTTGGCTTGCTTTAAGCAGTTTCCCAGTCGAGAACTCAGGGAGAACCATTTAAAATCGCACGAGGCTGCTCAGGAAATTTCATGGGCCTTTGAAATATTTGTCAATTGCGATGAGCATCTTGAGAAGCCAAAAGTAAGCGTACATCAAGATTCAAGAATAGAAGTAACAACGagtatccattgcttaaattATCTGAAATCTATGGACAACGAAAAAACTTCTTGGTGCATTTACTGCGATTCAGTTTTTACTAGAACGCGCATGTTAGAGGACCACTTGAAGGGAATCCATCCTTCCCTCGAGAATCCATATTTCGGTTGCTTTTTGTGTGGCACTCGTCACGTTGAAAAACAGGCCTTTCTTCTGCATGTCTTGAATGAACATAATTTCATTTGCAAGTTGTGTTTTACAACATTTAGCAGTGCAGAGAAAATGTTAACACATTCAAGAATACCTCATGTTTACTCCTGTAAGCATTGCAACTTTACCCACGGTGAATTAAGCACAATAAGTACACACATGTCGGCACATCATAACTACATAAAGATCTGCAAGATTTGTGAGAGAGTGTTTGTTACAAATGATCAACTGTTATCACACGCATATATTCATAGTGGATCCAAATACGAAGTAAAAAGAAGAAAGTGCGGTTATTGTGGAAAAGTGGCTGTATGTCCGCCGCAGCATAGTGCAGTGGAAATTAGAATTCCGCCGTCCGGCACATGTTGCCAGATTGTGGTCAATTTGTCGAAAAGCCCGGAGCTGGCGAACTTTAGAAGACTTCAGAATTTCTTCGATGGTTTGGATTTTTTGGTTGAGTGTGTTCAGTTCATATTCGGGAACTTAAAAAGTGATTCTGCACCGGGCCCAGATCGgGGTGACGAATGTACAGAAGACTTAACTACAATAACCGAGAAGAATATCGtagaaaataaaaagtttcAGTGTGCCATGTGCAACGCGAAATTCGGTAGAACCATATCTTACGAAAAGCACATTTTTAGCTGCAGAAAACTTTTGGCAGATGACTCTAGTTCCTGGGATGAATCAAACGATGACAGAAATGATAAAGATTTTGATGCCAAGAATAACAATGAAATTCAAGAATCCTGCAAATGTAATTCAGAATTTTCTGAGCGGGCAGCTCATCCAGAACACAGTTCTGCGTGTAAGACGATTGTTATAGGTCATGTGGATGATGTATTTTTAAGTGATGCTGAAGACTTCGGAGTTGATCCTTTTGATTCTGAAAGCAACAGCTCCTGCTATGGAGAAAAAGACTTCTACAATAACAATAATCATAAAAGCATTGATACTGAAACTATCATGTTATTTCAAGAATCTCCAGAATCCGCAAAATTGTCTAAAGCAAAAAATATTTGTATCATTGAAAATATTCTCATCAAAAGTGCAGACGTTAGAGGTGGTTCACGgAGAAAAAATAAACATATTTGGGAAGAAGATATAAAGATAGAAGAAACTAACATTCGTGTTTATAACTCCTATGATACGAGAATCAACAGAATCAAAGATCCAAAAAGTGTAAAGCAAAAATTTCCATTGCATAATGTTGAACCTCGAGTTGAAATTAAGGAACCATCCAATTTTGATGCCCTAAGTATCTGTGTCATCTGCTTCGACACTTTCAAAACCAAGAAAGAGCTAGAAGAACACCAATCATTCCACAAGGAAGTAGAAAATTCATTTCAGATACCAAAATCAACAGTTTCAGCAATATCGCCATTGGCGGCACTGGATATGCACAAGGAAGTAGAAAATTCATTTCAGATACCAAAATCGAGAGTTTCAGCAATATCGCCATTGGCGGCACTGGATATGCAAGTAGCCCAAATTGGCGTGTCTCCACCGGTAAAGAACAGACCCAAATCAGCAACATCAACATGGAGATCAGGAAATATGTGGACAGTTCAAAATAGATTGCCACAATTAGAAATCCCGACAGTAGATCTCCAAGATGATATTACGTCCTGGTGTATCTATTGTGACAAAACTTTTGCCTCACCTCCAGTCTTGAAAGACCATGTAAGATTTTACCATTCTTCAATACCAAGGCCCCGTTTCAGATGCGTTTTGTGTAAATCAAACTTTTATTGTGACAGCATTTTAGGCAATCATATACTTACGAAACACAATAACTTTTGCTCGATGTGTTTCGAGCAGTTTTCGAGTAAGAAGGAACGAGACGAACATCTCAAAATCCATACATTGAACTGCGATTTTTGTGGAAACTGTTACACCTCACCCAATGAGTTACAATTGCATTTAAAAATGCACACCGATTTGCCTGGGAAAAAACGAAAAAAGGAAATGTGCAGATATTGCGGCAAGTATTTCGAGCGTGTAAATGATCACATGCAGACACATAAGGAGCTCTTACAGGGTGCCAAAATTAAGAAGTTTTATTGTCCAACTTGTAATAAAGACTATACATCTAGTCAGGGAGTGAACCGTTGCGTTACTCGCCATAAAGGTGAAAAGATATACAAATGCAACGAATGCGGCAAAGGCTACTTTTACTATTCGAGCTTGATTGTTCATAAAAGACTTCACTCTGGTGCAAACCCGTACAATTGCACAAGATGCGAAAAGAGCTTTTACGCTGATCAAGGTCTGCACAAACACATGCTGAGTCACCACGGAATTGACACGAGAGAAGGGAAGAAAACTGCGGAAAAGTAA
Protein Sequence: MLSLTVPYVINSVQNSRQLPYNSFIMAIAPETITEDIVETEDHVYQKCKGKFSQQLVLDCCKQADGEELDNLDFLESETKQVNVMHCSKGFLNPSEVNVCPLCYDTFETVEDLEQHEIFHKEVESSNEFDQGPKFAVSDGIDHEKTGCKSVSQLSTGVKNDKESANESRYGCSACKATSSNMRDIRNHIFVQHENGCSKCYKREILCVLKSEEYEDMMGEYENSNLVEETKVIYVRKRETDDKHYKSDEITCWCIYCNKTFARPPFLKKHLDQVHFSIRKTRVGCHLCQTSYCSEHSLNSHILKEHKFVCTLCMDMFPNKLELQDHSKILHIFTCQICNKGFKKLRKLRLHTELHNYQGTNKMKWKKAHYMSGTFLHNRSLVKRHYKKSTKDQNIGESEKFSCDKCQTTFMRRISYDRHLIACGKRDTGYVCGYCISKFTAYGVYKKHFKECARKCKEIFGELNIQSNKESIHACTKCYDAFETLEDLRKHLSSHETAEFYASNAFGTTPVFLNEKYVNEEELQIDPLASSYGYLNKNENNFNIENFEKRKETLEEDEEFLITKRNELQTACSENLDNQNKSIKNEIFLVEPKREENSEEIEEIRTSNLKLKIVDDLEETVSCDEVDKYEAPTNPEEGQEIRTIVTIKIEDDLVEESYSDGVDAEEYEASADYSEDVESSEVNEIVNSETEDDIEETNSTTEGMEKTNYHDENKKFHEFYMKLRGNITSCYCVCCTKSFLSPIKFRNHVNKKHSFFRIPCYGCILCKKEYSTSVTLAVHILIEHEHACLACFKQFPSRELRENHLKSHEAAQEISWAFEIFVNCDEHLEKPKVSVHQDSRIEVTTSIHCLNYLKSMDNEKTSWCIYCDSVFTRTRMLEDHLKGIHPSLENPYFGCFLCGTRHVEKQAFLLHVLNEHNFICKLCFTTFSSAEKMLTHSRIPHVYSCKHCNFTHGELSTISTHMSAHHNYIKICKICERVFVTNDQLLSHAYIHSGSKYEVKRRKCGYCGKVAVCPPQHSAVEIRIPPSGTCCQIVVNLSKSPELANFRRLQNFFDGLDFLVECVQFIFGNLKSDSAPGPDRGDECTEDLTTITEKNIVENKKFQCAMCNAKFGRTISYEKHIFSCRKLLADDSSSWDESNDDRNDKDFDAKNNNEIQESCKCNSEFSERAAHPEHSSACKTIVIGHVDDVFLSDAEDFGVDPFDSESNSSCYGEKDFYNNNNHKSIDTETIMLFQESPESAKLSKAKNICIIENILIKSADVRGGSRRKNKHIWEEDIKIEETNIRVYNSYDTRINRIKDPKSVKQKFPLHNVEPRVEIKEPSNFDALSICVICFDTFKTKKELEEHQSFHKEVENSFQIPKSTVSAISPLAALDMHKEVENSFQIPKSRVSAISPLAALDMQVAQIGVSPPVKNRPKSATSTWRSGNMWTVQNRLPQLEIPTVDLQDDITSWCIYCDKTFASPPVLKDHVRFYHSSIPRPRFRCVLCKSNFYCDSILGNHILTKHNNFCSMCFEQFSSKKERDEHLKIHTLNCDFCGNCYTSPNELQLHLKMHTDLPGKKRKKEMCRYCGKYFERVNDHMQTHKELLQGAKIKKFYCPTCNKDYTSSQGVNRCVTRHKGEKIYKCNECGKGYFYYSSLIVHKRLHSGANPYNCTRCEKSFYADQGLHKHMLSHHGIDTREGKKTAEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -