Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014493.1:43845134-43859878[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.1 90 5.4 0.2 2 23 210 231 210 231 0.92

2 20 7.9 6.4e+02 2.7 6.9 3 23 349 370 349 371 0.95

3 20 0.0054 0.43 12.7 1.9 2 23 429 450 428 450 0.96

4 20 0.24 20 7.5 0.2 3 12 464 473 463 481 0.84

5 20 0.0021 0.17 13.9 1.0 1 23 519 541 519 541 0.98

6 20 0.028 2.2 10.4 2.3 1 23 547 569 547 569 0.98

7 20 0.91 73 5.6 0.7 2 23 683 704 683 704 0.92

8 20 0.0022 0.17 13.9 2.0 5 23 825 844 823 844 0.93

9 20 0.00066 0.054 15.5 0.8 2 23 903 924 902 924 0.97

10 20 0.71 57 6.0 4.9 2 23 937 955 936 955 0.88

11 20 6.2 5e+02 3.0 0.4 1 10 966 975 966 976 0.94

12 20 0.00019 0.015 17.2 0.9 1 23 994 1016 994 1016 0.99

13 20 0.028 2.2 10.4 2.3 1 23 1022 1044 1022 1044 0.98

14 20 1.3 1e+02 5.2 0.7 2 23 1158 1179 1158 1179 0.92

15 20 0.0022 0.17 13.9 2.0 5 23 1300 1319 1298 1319 0.93

16 20 0.00052 0.042 15.8 0.7 2 23 1378 1399 1377 1399 0.97

17 20 0.71 57 6.0 4.9 2 23 1412 1430 1411 1430 0.88

18 20 0.0022 0.18 13.9 0.9 1 23 1469 1491 1469 1491 0.98

19 20 0.42 34 6.7 4.3 1 23 1497 1519 1497 1519 0.98

20 20 2.4 1.9e+02 4.3 0.4 3 23 1595 1615 1594 1615 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.1	90	5.4	0.2	2	23	210	231	210	231	0.92
2	20	7.9	6.4e+02	2.7	6.9	3	23	349	370	349	371	0.95
3	20	0.0054	0.43	12.7	1.9	2	23	429	450	428	450	0.96
4	20	0.24	20	7.5	0.2	3	12	464	473	463	481	0.84
5	20	0.0021	0.17	13.9	1.0	1	23	519	541	519	541	0.98
6	20	0.028	2.2	10.4	2.3	1	23	547	569	547	569	0.98
7	20	0.91	73	5.6	0.7	2	23	683	704	683	704	0.92
8	20	0.0022	0.17	13.9	2.0	5	23	825	844	823	844	0.93
9	20	0.00066	0.054	15.5	0.8	2	23	903	924	902	924	0.97
10	20	0.71	57	6.0	4.9	2	23	937	955	936	955	0.88
11	20	6.2	5e+02	3.0	0.4	1	10	966	975	966	976	0.94
12	20	0.00019	0.015	17.2	0.9	1	23	994	1016	994	1016	0.99
13	20	0.028	2.2	10.4	2.3	1	23	1022	1044	1022	1044	0.98
14	20	1.3	1e+02	5.2	0.7	2	23	1158	1179	1158	1179	0.92
15	20	0.0022	0.17	13.9	2.0	5	23	1300	1319	1298	1319	0.93
16	20	0.00052	0.042	15.8	0.7	2	23	1378	1399	1377	1399	0.97
17	20	0.71	57	6.0	4.9	2	23	1412	1430	1411	1430	0.88
18	20	0.0022	0.18	13.9	0.9	1	23	1469	1491	1469	1491	0.98
19	20	0.42	34	6.7	4.3	1	23	1497	1519	1497	1519	0.98
20	20	2.4	1.9e+02	4.3	0.4	3	23	1595	1615	1594	1615	0.92

Sequence Information

Coding Sequence: ATGGCCAGAACAGGTGAAGTATTCAGCCATGTGCGTGCATTATTGTATGCAGCGGAATATGCTTCGAAATTGAAGAATCGGTCTTGTACTGACCTTAAGGCATCCTGGTTGGCACCCGCAACTAGAAAGGTTCCCGCAGTTCCAATTTCTCAAATGGAATGGCTAGAACGCAACACTAAAGTTTTGCCTTCAGTAACACCTACGCAAAGTGAGAATTTAGTAAGGCTTcttgaaaatataaatgaagAAGGATGTACATCAGCCGTCATGCGAATTGTTGAGCCATTTTGCGGTGAAGTTGAAACAAGTGCTGGGGCAACTGCTTTAAACCAAAATGAAGCAAGTAGCAAGGAACTTTTGAGAAGAAATAAATATGTGTGCGAAAATTACAACAGGGAGTTGGGCCGTCTGTTGTTGGAAGAGCATTTTGCTTCTTATAAGAAAAGCAGTAATCTAAATAATAGGGAAACTATAGCTCTTACAGATGATTTTGATGATAACAGACGGAAGACTAGAAGCAGCACTAGAGCTTCACTAAAAGATGCGAAGCTAGAGTTTCCCTTGGATAATGTTCAAGTTAAAGCTGAAGGATTTTCGAGTGCAAAAGACAAATTTGGAATTGGAAATGTCTGTTCCATCTGCTTCGACACTTTCGCAACAATGGATGACCTGAAAGAACACGAATCATTCCATGAGGAAGTAAAAAATTCATTTCAAATGCCAGAATTGGCCCGAACTGAATTTCCTGGACCAAAAAGAGAAATGCCACAGTTGGGAATGTTAACTTCATCAAGGACAATATCAAATAAGGAAGCAGCCCGAACTGGATTTCCTGAACCAAAAACAAGAATGCCAGATTTAACAGTTTTATTACCAACAGAAAGAAATAACTGTGCAGCCGAAACTGGATTGTCTGGAATGGAAAGCCATCAAGAATCTTCAAGTCCAGCAGCAGTaaatgtgcaaaaagcgtcTCAAGCAGGAAAGGAAAGAATAAACGGCGAACAGCGTGCTAAATTCAATTTAGATGATATTACTTCTTGGTGTGTTTATTGTTGCCAAACTTTCACGTTGCCTTCTCATTTGGCAGACCATATACGCCACTCTCATCATTCAATAACAGATCCAAGTTTGGGATGTTTCTTTTGTAAACTAACATCCTTTGGTAACGATATCGATTTGCGCGAACATATACTTATCAAACACAAGCATGTTTGCATAAAATGCTGCTTGCAGTTTTCTTGTGGAGAGGAGCTGGACGAACATTTAAAAGTCCATGGATTGCACTGCAAAATTTGTGACGCGAGGTACAGCAGACGCGATAAGTTTGAAATTCATGTGAAGTCGCACAGCGTCAAGACACCCAAAAAAATACGAAAGAAGAAGATATGCCCGCATTGTGGAAAGATGTTCTATCGCATAAAATTACATATGGAGATACATAAAGATGTAAAGACGGAAAGGAAGAAGTATTGCTGTCCAACTTGTAATAAGGAGTTTTTGTCTGACAGCGGCAAACGAAGTTGCATGGATCGCCACAAAGGAGAGAAGAAATTCAAATGCTCCGAGTGCAATAAAGCCTACTTTTACGGTGAAAGCTTGACGGTCCACAAAAGAATTCACACCGGCGAGAAACCTTACAAATGCAATAGTTGTGAAAAGAGTTTTTATACTATGCAAATTTTGTATAAGCATATGCTAAGTCACGGAATTGACACGAGAGCCAAGAATAAGGCAAGTACTTTGAACCAAAATGGAACAAGAAGCAACGAACTTTCGAGAAGAAATAAATATGTTTGCAAAAACTACAACAGTGAGTTCCGCCGTCCATTGTTGAAAGAGCATCTTACTTCTTCTAAGAAAAGTAGTAATGTAAATAAGAGTGAAACTATAGCTCTTACAGATGATTTTGATGATAACAGACGGAAGACTAGAAGCAGCAGTAGAGCTTCTCTAAAAGATACAAATCCAGAGTTTCCCTTGGATAACGCTCAAGTTGAAGCTGAAGAATTTTCGAGTGCAAAAGACAAATTTGGAATTGGAAATGTCTGTTCCATCTGCTTCGACACTTTCACGACAATGAAAGACCTGAGAGAACACGAATCGTTCCATGAGGAAGTAAAAAATTCATTTCAAATCCCAGAATTGATCCAAACTGAATTTCCTGGACCAGAAAGGAAAATGCCACAGTTGGAAATGTTAGTAACGTCATCAAGGACAACAGTAAATAAGGAAGCAGCCCAAACTGGATTTCCCGAACCAAAAACAGGAATGCCAGATTTACCATTTTTATCAACAACAGCAAGTAATAACCGTGCAGCCGAAATTGGATTGTCTGGAATGGAAAGTAGTCGAGAATCTTCAAGTCCAGCAGCAGTAAATGTGCAAGAAGCGTCTCCAGCAGAAAAGGAAAGAATAAATGGCAAACAGTATGCTAAATTCAATTCAGATGATATTACTTCTTGGTGTATTTATTGCGGCAAAACTTTCACCTTGCCTTCTCATTTGGCAAACCATATTATGCACTCTCATTACTCAATATCAAATCCGCGTTTGggatgtttcgtttgtaaacTGACATCCTTTGATAACGATATCAATTTGCGCGAACACATACTTATCAAACACAAGCATGCTTGCTTGAAATGCTGCTTGCAGTTTTCTTGTGAAGAGGAGCTGGATGAGCATTTAAAAATCCATGGAATGCGCTGCAAAATTTGTGACGTTTCGTACAGCAGACGtgataaatttgaaattcaCGTGAAGTCGCACAGCGTCAAGCTACCCAAGAAATTACGAAAGAAGAAAGTATGCACTCATTGTGGAAAGATGTTTAGTCATATAAAATTACATATGGAGACACATAAAGACATAAACAGCACTGGAAGGAAGAAGTATAATTGTCCAACTTGTAATAAGGAGTTTTTGTCTGGCAGCAGCAAGCGATTCTGCATGGATCGCCACAAAGGAGAGAAGAAATTCAAATGCTCCGAGTGCAATAAAGCTTACTTTTATGCTGAAAGCTTGACTGTCCACAAAAGAATTCACAGCGGCGAGAAGCCTTACAAATGCAATAGTTGTGAAAAGAGTTTTTATACTATGCAAATTTTGTATAAGCATATGCTAAGTCACGGAATTGACACGAGAGCCAAGAATAAGGCAAGTACTTTGAACCAAAATGGAACAAGAAGCAACGAACTTTCGAGAAGAAATAAATATGTTTGCAAAAACTACAACAGTGAGTTCCGCCGTCCATTGTTGAAAGAGCATCTTACTTCTTCTAAGAAAAGTAGTAATGTAAATAAGAGAGAAACTATAGCTCTTACAGATGATTTTGATGATAACAGACGGAAGACTATAAGCAGCAGTAGAGCTTCTCTAAAAGATACAAATCCAGAGTTTCCCTTGGATAACGCTCAAGTTGAAGCTGAAGAATTTTTGAGTGCAAAAGACAAATTTGGAATTGGAAATGTCTGTTCCATCTGCTTCGACACTTTCACGTCAATGAAAGACCTGAGAGAACACGAATCGTTCCATGAGGAAGTAAAAAATTCATTTCAAATCCCAGAATTGACCCAAACTGAATTTCCTGGACCAGAAAGGAAAATGCCACAGTTGGAAATGTTAGTAACGTCATCAAGGGCAACAGTAAATAAGGAAGCAGCCCAAACTGAATTTCCCGAACCAAAAACAGGAATGCCAGATTTACCAGTTTTATCAACAACAGCAAGTAATAACCGTGCAGCCGAAATTGGATTGTCTGGAATGGAAAGTAGTCGAGAATCTTCAAGTCCAGCAGCAGTAAATGTGCAAGAAGCGTCTCCAGCAGAAAAGGAAAGAATAAACGGCAAACAGTACGCTAAATTCAATTCAGATGATATTACTTCTTGGTGTATTTATTGCGGCAAAACTTTCACCTTGCCTTCTCATTTGGCAAACCATATTATGCACTCTCATTACTCAATATCAAATCCGCGTTTGggatgtttcgtttgtaaacTGACATCCTTTGATAACGATATCGATTTGCGTGAACACATACTTATCAAACACAAGCATGCTTGCTTAAAATGCTGCTTGCAGTTTTCTTGCAAAGAGGAGCTGGATGAACATTTTAAAATCCATGAATTGCGCTGCAAAATTTGTGACGTTTCGTACAGCAGACGtgataaatttgaaattcaCGTGAAGTCGCACAGCGTCAAGCTACCCAAGAAATTACGAAAGAAGAAAGTATGCACTCATTGTGGAAAGATGTTCAGTCATATAAAATTACATATGGAGACACATAAAGACATAAACAGTGCTGAAAGGAAGAAGTATAATTGTCCAACTTGTAATAGGGAGTTTTTGTCTGACAGCGGCATGCGATTCTGCATGGATCGCCACAAAGGAGAGAAGAAATTCAAATGCTCCGAGTGCAATAAAGCCTACTTTTACGGTGAAAGCTTGAACGTCCACAAAAGAATTCACAGCGGCAAGAAGCCTTTCAAATGCCATAGTTGTGAAAAGAGTTATTATACTATGCAAATTTTGTATAAGCATATGCTAAGTCACGGAATTGACACGAGAGCCAAGAATAATGCATTAGATGCAAATACAGTGGAACAAAATGAAGATAGTAGCAACGAAGTTTTGAGAGGAAATTGTGAGGATGACGATAAACGGAGTAGCGAAGAAACTTGTGCAATAAACCAAGAAGTTTCCTTGGAAAACGTTCAGCCTCAAGTCAACGCTGAAGACTCTTCGAATGTAGAAAATAGCTTTGAAGTTGGAAATATCTGTTCCATCTGCTTCGACACTTTCGAAACAACAGAAGACCTAAAAGAACACGAATCGTTCCACGAGGAAGTAGAAAATTCATTTCAAATGCCAGTACGAACAAATCAAGCGGTTCCAACATCGGAAGAAGTAAATACCcacataacctaa
Protein Sequence: MARTGEVFSHVRALLYAAEYASKLKNRSCTDLKASWLAPATRKVPAVPISQMEWLERNTKVLPSVTPTQSENLVRLLENINEEGCTSAVMRIVEPFCGEVETSAGATALNQNEASSKELLRRNKYVCENYNRELGRLLLEEHFASYKKSSNLNNRETIALTDDFDDNRRKTRSSTRASLKDAKLEFPLDNVQVKAEGFSSAKDKFGIGNVCSICFDTFATMDDLKEHESFHEEVKNSFQMPELARTEFPGPKREMPQLGMLTSSRTISNKEAARTGFPEPKTRMPDLTVLLPTERNNCAAETGLSGMESHQESSSPAAVNVQKASQAGKERINGEQRAKFNLDDITSWCVYCCQTFTLPSHLADHIRHSHHSITDPSLGCFFCKLTSFGNDIDLREHILIKHKHVCIKCCLQFSCGEELDEHLKVHGLHCKICDARYSRRDKFEIHVKSHSVKTPKKIRKKKICPHCGKMFYRIKLHMEIHKDVKTERKKYCCPTCNKEFLSDSGKRSCMDRHKGEKKFKCSECNKAYFYGESLTVHKRIHTGEKPYKCNSCEKSFYTMQILYKHMLSHGIDTRAKNKASTLNQNGTRSNELSRRNKYVCKNYNSEFRRPLLKEHLTSSKKSSNVNKSETIALTDDFDDNRRKTRSSSRASLKDTNPEFPLDNAQVEAEEFSSAKDKFGIGNVCSICFDTFTTMKDLREHESFHEEVKNSFQIPELIQTEFPGPERKMPQLEMLVTSSRTTVNKEAAQTGFPEPKTGMPDLPFLSTTASNNRAAEIGLSGMESSRESSSPAAVNVQEASPAEKERINGKQYAKFNSDDITSWCIYCGKTFTLPSHLANHIMHSHYSISNPRLGCFVCKLTSFDNDINLREHILIKHKHACLKCCLQFSCEEELDEHLKIHGMRCKICDVSYSRRDKFEIHVKSHSVKLPKKLRKKKVCTHCGKMFSHIKLHMETHKDINSTGRKKYNCPTCNKEFLSGSSKRFCMDRHKGEKKFKCSECNKAYFYAESLTVHKRIHSGEKPYKCNSCEKSFYTMQILYKHMLSHGIDTRAKNKASTLNQNGTRSNELSRRNKYVCKNYNSEFRRPLLKEHLTSSKKSSNVNKRETIALTDDFDDNRRKTISSSRASLKDTNPEFPLDNAQVEAEEFLSAKDKFGIGNVCSICFDTFTSMKDLREHESFHEEVKNSFQIPELTQTEFPGPERKMPQLEMLVTSSRATVNKEAAQTEFPEPKTGMPDLPVLSTTASNNRAAEIGLSGMESSRESSSPAAVNVQEASPAEKERINGKQYAKFNSDDITSWCIYCGKTFTLPSHLANHIMHSHYSISNPRLGCFVCKLTSFDNDIDLREHILIKHKHACLKCCLQFSCKEELDEHFKIHELRCKICDVSYSRRDKFEIHVKSHSVKLPKKLRKKKVCTHCGKMFSHIKLHMETHKDINSAERKKYNCPTCNREFLSDSGMRFCMDRHKGEKKFKCSECNKAYFYGESLNVHKRIHSGKKPFKCHSCEKSYYTMQILYKHMLSHGIDTRAKNNALDANTVEQNEDSSNEVLRGNCEDDDKRSSEETCAINQEVSLENVQPQVNAEDSSNVENSFEVGNICSICFDTFETTEDLKEHESFHEEVENSFQMPVRTNQAVPTSEEVNTHIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -