Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014496.1:11603225-11609413[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.004 0.32 13.1 3.7 2 23 243 265 242 265 0.97

2 16 0.015 1.2 11.3 0.4 1 22 277 298 277 301 0.90

3 16 0.0013 0.1 14.6 5.1 2 23 372 394 371 394 0.97

4 16 0.082 6.6 8.9 1.4 1 23 398 422 398 422 0.91

5 16 5.9e-05 0.0048 18.8 3.3 2 23 480 502 479 502 0.96

6 16 0.096 7.7 8.7 5.0 1 23 506 530 506 530 0.92

7 16 0.022 1.7 10.8 0.3 1 23 594 617 594 617 0.96

8 16 0.84 67 5.8 0.2 1 23 621 643 621 643 0.97

9 16 0.012 1 11.5 0.2 2 23 654 676 653 676 0.96

10 16 0.009 0.73 11.9 0.9 2 23 695 715 694 715 0.96

11 16 0.0039 0.31 13.1 0.1 2 23 724 746 723 746 0.96

12 16 2.4 2e+02 4.3 8.7 2 23 749 771 748 771 0.92

13 16 0.071 5.7 9.1 4.7 1 22 790 811 790 811 0.95

14 16 2 1.6e+02 4.6 0.1 3 23 1071 1092 1070 1092 0.92

15 16 0.0027 0.22 13.6 1.8 3 20 1984 2001 1983 2003 0.94

16 16 0.00034 0.028 16.4 0.6 1 23 2035 2058 2035 2058 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.004	0.32	13.1	3.7	2	23	243	265	242	265	0.97
2	16	0.015	1.2	11.3	0.4	1	22	277	298	277	301	0.90
3	16	0.0013	0.1	14.6	5.1	2	23	372	394	371	394	0.97
4	16	0.082	6.6	8.9	1.4	1	23	398	422	398	422	0.91
5	16	5.9e-05	0.0048	18.8	3.3	2	23	480	502	479	502	0.96
6	16	0.096	7.7	8.7	5.0	1	23	506	530	506	530	0.92
7	16	0.022	1.7	10.8	0.3	1	23	594	617	594	617	0.96
8	16	0.84	67	5.8	0.2	1	23	621	643	621	643	0.97
9	16	0.012	1	11.5	0.2	2	23	654	676	653	676	0.96
10	16	0.009	0.73	11.9	0.9	2	23	695	715	694	715	0.96
11	16	0.0039	0.31	13.1	0.1	2	23	724	746	723	746	0.96
12	16	2.4	2e+02	4.3	8.7	2	23	749	771	748	771	0.92
13	16	0.071	5.7	9.1	4.7	1	22	790	811	790	811	0.95
14	16	2	1.6e+02	4.6	0.1	3	23	1071	1092	1070	1092	0.92
15	16	0.0027	0.22	13.6	1.8	3	20	1984	2001	1983	2003	0.94
16	16	0.00034	0.028	16.4	0.6	1	23	2035	2058	2035	2058	0.96

Sequence Information

Coding Sequence: atgtgcCTGGAATCAGAACAAAAATTGTTGACTATTTTGCTAATAGCACATTCGAGTGATTCTACTGATAATTCATCCAAACCAGCAATGCAAAACACTACAGATGAGATTACAGAAAAAGAAGATTGCAATGTCGCCAAGATTGTCATTAAAAAGGAAGTGGAAGATCAAGATGAAATTTGTATTGAGGAACTAGATTTAGGTTACGAAGGCACATCGGATTATGACAATAGCGAAGTATATACTGAAATATTTAGAGATGATATAATTCATTTGGAAGAAAACAGTAACCGAGAAAGTGAGCGAGAAAGTTATGCTAGCGATAACGATCAAGTCGTCTTGTCGGACGATAATGATATTCCTAATTTACATTTGGCGAATAGTCCATTAGAAATTTCAGAAAATGGCTTTGCGTCTtcgaatgaaaattttgaagatttatCAATGCCAGTCCTTGAAAAGCAATGTGAGGTAATTCATCCTGTCAGGAAGTTTAAACCTGCTACAGGTGAAGGTATCTATAAATCTGATTCTGTATCTAATATAGATTCTCAAAATTTATTGATTCCCGTTCGGGAAATGCCCTATGATCTTACATTCCCGGAAGAGTTGCGTCCAAGAAGCCCCGAAAAAATTCTCAATTCCCTTCCTGCAGAAAGTATGGATTCGTTGGTTACTCATTCACCAGTTTCCAAAATACAAGATGAGTCACATGAATTCATAATGCAGTGCAAACACTGTTCCAGTAGGTTCAAAAATAATTCCACCCTGGCCATGCATATTAAGTCAACACATATCAGACATATTAAGTCGACAAATACAAAATTATATATATGCCGTATTTGCAAACTTGCCTTTACAACGTTGAAAGGTTTGAGAGTGCATGCTAATCGAAAATTGCATCACTCTTTAACCCCTGTTGATGATGATATTAAATTTACTAAAATATGCAACCCAGAAAATACCAAAACTTTCAATAACTATGTTCCTTCAGAAACTATAGATTCATTAGATGAACGTTTCAATAACTATGTTCCTTCAGAATCTATAGATTCATTAGATGAACATTCACCAGTTTATGAAATACAAGATAGGTTAAATCTATATAATAAAAAGTGCAAACACTGCTTTAAAAGATTCAGAAATAATACCACTCTGGCCGTACATATTAAGTCAACACATTCAAACGCATATGCATGTCGTATTTGCAAATTCACATCTAAAACATCGACAGGTTTGAAAGTGCACCTTAATCGAAAATCACATCACTTTTTAACCAGTGATGGTGAAGTACCTTCTGAGAGTAAATTTACTAAAACATTCAAGCAAGAAAGTACTGAAGCTCTTAATAATTCtgttcctccagaaaatacAGATTTGTTAGATGTACGTTCACCAGTTTGTGAAATACAAGATAGGTCAAATGAACTCAGTATTAAGTGCAAACACTGCTCCAAGAGGTTCAAATATAAAGCTAACCTAGCCGTGCATATTAAGTCGAGACATAGAAAAACATATACATGTCATATTTGTAAATTTCCATGTAAGACATTGAAAGGTTTGAAATTACACATTAATCGAAAATCGCATCACCCTTCAGCTCCCATTGGTGAAGTATCTTGTATTGTTAAGTCTACTAAAAAGTGTACCTCAAAAAGTAGTGAAAACCTGAACAATTCCATTATTGCAACAAATAATGTAGAATCACTGAAAGCACTTTCTTCTGTTAACAAAATGCAATATAGGTCAAATGAAAATATAAGTAAAACTAATGAAAAATTCGAATGCGAACAATGCTTCTTAATATTTGAAGACAAATTATCTTTGAAGGAGCACATTAAAGAAATGCATGGAAAAATATTTACTTGTAACATTTGTAGTTTTATCTCTAGTACTCTGCCGGGTCTTGGGACACACAAGAAAATACACAGAGGAAATTCGGATTTACTTGAAGGAAAGAAATGCCCGATTTGTAACTTCGAGGTCTATTCAGAAATGTCTTTGCAAGTACATATGAGAAATGTTCACAAAAAAATAAGCAAAAGAGGAAATGttcacaaaaaaataaacagaaGAGGGAGCCCATGCCCAATTTGTAATCGAGTATATTCAAAAGTTAAATTAATTACACATATGCACAAACACAGTTCTGATGAAAGCAAATATATATCGTGTAATGTTTGTAAAATGCCGTTTATAGAACAAAGCGACTTGGATAAGCATCTTAAAGTAAACCATCCCATAGAGTGTAGTGTTTGTAGTAAACACTTTTCACTTAAAAAACAACttcataaacatttttttaaatgccatCAGACAATGTTAGAACATAATTACTGTATGACTACCTTCAATTCTCCACGGTTGTTCAAATGTGAATTGTGTAAGAAACAGTGTATATCGCAAGATCAATTGAATTTGCATAGATGTACGCAAGTTGGGTCCACATTAACGGTACCGCTAGACAATTTTGAACGCTTCCATTCCCTGTGTCAACCTTCCTTATCAGAAACTGATATACTAAACGGTACTTACATCCAGTCCAACGGAAATGAGTCCCATAGCAAAACTGTTCCTGAAATAATTGAAGTTGCTTGTATAAGATATCGGAAGCATTTTAACGTTAACTTAACACCAGAATCTTTCGAATGCTTTGTTAAATTGGAAAGAGTACTGGAAAATAGTCATAAGGAGATTCAAATTGCTGAACCTAAAATTAAACTTATAGACACCAATATTCTAAAGAAAAGTCCTAAACCTAGAATTCAATCTATAAGACGCAAAAGTTCAAAGCAAAGTCCCGTACTTGAAATCCAATCTGGAAAATCGAGAAAAAGAAATTATaagataaaaaattttgttgaacACTCTTACTGCTGCAGAGGCCCTGAAGAAACAGTACAATCAACGCGATCACTATGTAAGATTCCACCTTATATACCTGAAAATCTATATGTTAAAAAAGAGGGGAAGAATGCGCAAAATGAAAGCGAAAAAATAACACAGCCTAGATACAAACCATTCTATACAAAGAATAACTTTATTAACGCAAGTTTGTCAgcaattgaaaatttgttcaaaaagtTATCAGTAAGCGATCATATTGATAAGGAATCCCCTATGTTAACCAAAGAAGCATCCAAAATCAGTGAACACGACAGTGAATTGTCTGCTTTACAATATTCCGTTAATTCAAAACAAACTCTCTTATGTTATTATTGCCCTCGTGTGTTTGAGGTAGGACTAGATTTAACTTCCCATTTGACGCAAGCTCATGAAGACAAATTATTGTGTCACTTATATGCAACAACATTAAGTGATGAAACAAATTTATCTTCACATTTCAACAGTCAACACACAAATACTGAGCAAAAACTATGTCATGAGCAACAAAGCAATTTTGTTAATATGGATACAAGTACACTTACTGAGCAGGGTAACATAAGTTACCTAAAGGACAATCAGAAACAAACAGTAAAAGaaaatgaattatttgaattggatAAAGAAAGTACAGATAATGAGCAGGAAGTGTATCAGAACCAGCAAAGTAGTGTTACTAATGATGTTAATAAGAGAAAACTTTCTGAAAGAAAACAAATAAGTCACAGTCTACACTACAGTCATCGAGAAATTATAAGACAGAAAAATCCATTGCTTGGGAGTAGCAAAATATTCCAATACAGAAATAATGCGCAAGAGCTTTGTCAGAACCAACAAGCTAATATTCCTAATGTCATCGCTGAAAATATACGTTgtgaacaaaataaaataataagtcATAATCTAAACGACGATCAGCAGTTTATTGTGAAAGAGAAAAGCGTATTGCTTGAGAGTGATAAGAAATGTCAACAAACAGATAATGAGCAACAACTATGTCACAATGAACCCGCTACTAATGATGCGAATAAAAGTGCACCAGTTGAGCAATGTGGGATAAACTACTTCCTAAATGACAATCATGAACAAATTATTCGagatgaaaataaattacttGAAGCTGATGAAGCAAGTCAAAGTACAAATAGTGAGAAAGAAGTGTTTCAGAACCAGCAAACTAATGTTATTAATAACGTCAATGAACAAAATCAAAGAAGTCACAGTCTATACGACAACCATGGTGAAATTATGAAACAGAAAAAATCATTGCTTGGGAGTGAAGAAAGATgccaaaatagaaataatgaacaGGAAGGTTGTCAGCCAACTAATATTATGTATAGCACCAATGAAAGTGCTCCTAATGGGCAGAACAGCATAAATCATACACTAAATGGCGATCAGCAATGTATAGTAAAAGAGGAAAGTATATTGATTTCATTGCTTGTAAGTGGTAAGGAATCTGAATCAAATAACGAACAACACCCACGTGACAATGAATCTACTACTAAAGATAAGAATGAAAGTGAACCTGCTGGGCAATATAGCGTAAGTCGCATTTCAAGTGACGCACATGGACAAATTAAAGCGAGAGAAGAAAATTCATTGCATGAAAGCGATGAAAAATGTAAACTTACAAATAAGGAACAGGAGCTACATCATATTCAACAAACACATATTACTCGTGCACCTATTGGGCAGtttggaataaatcaaaacgaAAACGATAATAAGCAACATATAATGGAGGAAAATAATTGTTCGTTGCTTGAATGCAGCGAAAAATATGTTCCATCTGAAGGAGATTCAGGATCTGTAAACAGTGAATCATGCTTTAGTTTGTTGCAGAATGAAGATTATATCGCAGATAAGACATACTTTTGGGAGAATGGAAGTGCTCCCAACGAATAcgattttacaaataatgtaGATAGCGAGAAGCATGCATCAATAAAGGAATTGATTAAACCTGAAGAATTGCAGGAACTTAATGAAATAGTTCCAGAAGATTCCACCATTGAAAATGctgtaaatcaaattattgattttttggATGATGACATTACAGAAAAAAATGCATTAACTAAAGATCTGTCTAAAGCAAACAGTGTGACAGataccaagaaaattataattttggatAACATTCTATTAAAATCTGCTGAAAAACCAAAACAATTAGTTCTTAAGGAACTCGATGCAAAATCATGTGCCAACTCAAACTTCGTTAAGAATATAGTACCCCTATACAGTAAGAGCGATGCAGAATTAAAAGCAAGCGTTAAAGATGTTGTGACCTCTAAAACGGAAAACCAAAGTGAAGCAAATTCTGTTTATGACTTTTCAGATAATAGTTTATTAGATTCTCCGAAGATTAGCAAAGGTAAGAATCTGAAAAGCTTTCGAAATTTCAAAAACTGTAAAGCAAATAAGTCTCACTTAAATCACCTAAAAGAGCAGCCTGCTAGtgcaataagaaaaaggaaaccTTATGGACTTAGATCAAATGCACTAACAAAAAGTGACTGTACTGCTGCAGAAGAGAATATTCCTTTAAAGAAATTAAAGATAAAACTTTTGAATGAACAAAAGGAAGGCGAGTTGTGCTCTAATGAAATTTTATCTAAAAATCAGTCTCATGATATTGGAAAAGTACTGCCAAGTAAACAACGTAGTAAGAAAACAAAAGTCAGTAAACgtcatttaaataataaaagttctACTTCGAAAAAGGAAGGCGAATTGTGTTCTAATGAAATTTTATCTAAAAATCAATCTCGTGATATTGGAAAAGTACTGCCAAGTAAAGAACGTAGTAAGAAAACAAAAGTCAGTAAACgtcatttaaataataaaagttccACTTCGAAAAAGGAAGGCGAGTTGTGTTCTAATGAAATTTTATCTAAAAATCAATCTCGTGATATTGAAAAAGTAATACCAAGTAAAGAACGTAGTAAGAAAATAAAAGTCAGTAAACGTCATTTAAGTAATAAAAGTTCTACTTCGAAGGAACAATTATCCTATTGTAAATATGCTCTTAATAGAAAAAATCTTAGAAGCTTTTGCAACGTATGTAATCGAACATTTAATTCTAAGTCTCAGTATAATAAGCATAAAGTAAAATGTAAACCTGAATCTATTGAGGAACCAAAAAATCTTGATGAAGTTTTGAGTACAATAGATAAAATAgtagaaaaaatacaaaaaattaaaaaatacaagtgCAAATATTGTGATATGGCATTTGTTACAAAAGCTCAAATAAGAGTACATGTAAAATTAACACATCCTTTGAAATGGTGA
Protein Sequence: MCLESEQKLLTILLIAHSSDSTDNSSKPAMQNTTDEITEKEDCNVAKIVIKKEVEDQDEICIEELDLGYEGTSDYDNSEVYTEIFRDDIIHLEENSNRESERESYASDNDQVVLSDDNDIPNLHLANSPLEISENGFASSNENFEDLSMPVLEKQCEVIHPVRKFKPATGEGIYKSDSVSNIDSQNLLIPVREMPYDLTFPEELRPRSPEKILNSLPAESMDSLVTHSPVSKIQDESHEFIMQCKHCSSRFKNNSTLAMHIKSTHIRHIKSTNTKLYICRICKLAFTTLKGLRVHANRKLHHSLTPVDDDIKFTKICNPENTKTFNNYVPSETIDSLDERFNNYVPSESIDSLDEHSPVYEIQDRLNLYNKKCKHCFKRFRNNTTLAVHIKSTHSNAYACRICKFTSKTSTGLKVHLNRKSHHFLTSDGEVPSESKFTKTFKQESTEALNNSVPPENTDLLDVRSPVCEIQDRSNELSIKCKHCSKRFKYKANLAVHIKSRHRKTYTCHICKFPCKTLKGLKLHINRKSHHPSAPIGEVSCIVKSTKKCTSKSSENLNNSIIATNNVESLKALSSVNKMQYRSNENISKTNEKFECEQCFLIFEDKLSLKEHIKEMHGKIFTCNICSFISSTLPGLGTHKKIHRGNSDLLEGKKCPICNFEVYSEMSLQVHMRNVHKKISKRGNVHKKINRRGSPCPICNRVYSKVKLITHMHKHSSDESKYISCNVCKMPFIEQSDLDKHLKVNHPIECSVCSKHFSLKKQLHKHFFKCHQTMLEHNYCMTTFNSPRLFKCELCKKQCISQDQLNLHRCTQVGSTLTVPLDNFERFHSLCQPSLSETDILNGTYIQSNGNESHSKTVPEIIEVACIRYRKHFNVNLTPESFECFVKLERVLENSHKEIQIAEPKIKLIDTNILKKSPKPRIQSIRRKSSKQSPVLEIQSGKSRKRNYKIKNFVEHSYCCRGPEETVQSTRSLCKIPPYIPENLYVKKEGKNAQNESEKITQPRYKPFYTKNNFINASLSAIENLFKKLSVSDHIDKESPMLTKEASKISEHDSELSALQYSVNSKQTLLCYYCPRVFEVGLDLTSHLTQAHEDKLLCHLYATTLSDETNLSSHFNSQHTNTEQKLCHEQQSNFVNMDTSTLTEQGNISYLKDNQKQTVKENELFELDKESTDNEQEVYQNQQSSVTNDVNKRKLSERKQISHSLHYSHREIIRQKNPLLGSSKIFQYRNNAQELCQNQQANIPNVIAENIRCEQNKIISHNLNDDQQFIVKEKSVLLESDKKCQQTDNEQQLCHNEPATNDANKSAPVEQCGINYFLNDNHEQIIRDENKLLEADEASQSTNSEKEVFQNQQTNVINNVNEQNQRSHSLYDNHGEIMKQKKSLLGSEERCQNRNNEQEGCQPTNIMYSTNESAPNGQNSINHTLNGDQQCIVKEESILISLLVSGKESESNNEQHPRDNESTTKDKNESEPAGQYSVSRISSDAHGQIKAREENSLHESDEKCKLTNKEQELHHIQQTHITRAPIGQFGINQNENDNKQHIMEENNCSLLECSEKYVPSEGDSGSVNSESCFSLLQNEDYIADKTYFWENGSAPNEYDFTNNVDSEKHASIKELIKPEELQELNEIVPEDSTIENAVNQIIDFLDDDITEKNALTKDLSKANSVTDTKKIIILDNILLKSAEKPKQLVLKELDAKSCANSNFVKNIVPLYSKSDAELKASVKDVVTSKTENQSEANSVYDFSDNSLLDSPKISKGKNLKSFRNFKNCKANKSHLNHLKEQPASAIRKRKPYGLRSNALTKSDCTAAEENIPLKKLKIKLLNEQKEGELCSNEILSKNQSHDIGKVLPSKQRSKKTKVSKRHLNNKSSTSKKEGELCSNEILSKNQSRDIGKVLPSKERSKKTKVSKRHLNNKSSTSKKEGELCSNEILSKNQSRDIEKVIPSKERSKKIKVSKRHLSNKSSTSKEQLSYCKYALNRKNLRSFCNVCNRTFNSKSQYNKHKVKCKPESIEEPKNLDEVLSTIDKIVEKIQKIKKYKCKYCDMAFVTKAQIRVHVKLTHPLKW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -