Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: RREB1
Assembly: GCA_963966045.2
Location: OZ014502.1:4992983-4999057[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00034 0.027 16.5 2.3 1 23 61 83 61 83 0.98

2 16 0.00011 0.0086 18.0 0.4 1 23 95 117 95 117 0.98

3 16 0.00012 0.0095 17.9 6.6 1 23 123 145 123 145 0.99

4 16 7.7 6.2e+02 2.7 0.5 1 19 196 215 196 220 0.69

5 16 2.1 1.7e+02 4.5 0.5 2 23 226 248 225 248 0.95

6 16 3.3 2.7e+02 3.9 1.3 1 19 298 316 298 319 0.80

7 16 0.46 37 6.6 0.1 1 23 441 463 441 463 0.96

8 16 1.8e-05 0.0015 20.4 0.8 1 23 472 494 472 494 0.99

9 16 0.0018 0.15 14.1 3.1 1 23 500 523 500 523 0.97

10 16 0.0016 0.13 14.3 2.8 1 23 886 909 886 909 0.96

11 16 0.0011 0.089 14.8 0.4 2 23 1120 1141 1119 1141 0.97

12 16 0.19 15 7.8 6.1 1 23 1147 1170 1147 1170 0.97

13 16 0.95 76 5.6 4.4 1 20 1195 1215 1195 1219 0.93

14 16 0.026 2.1 10.5 1.0 1 23 1277 1300 1277 1300 0.95

15 16 0.037 3 10.0 0.4 3 23 1347 1367 1345 1367 0.93

16 16 0.017 1.3 11.1 5.9 1 23 1373 1395 1373 1395 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00034	0.027	16.5	2.3	1	23	61	83	61	83	0.98
2	16	0.00011	0.0086	18.0	0.4	1	23	95	117	95	117	0.98
3	16	0.00012	0.0095	17.9	6.6	1	23	123	145	123	145	0.99
4	16	7.7	6.2e+02	2.7	0.5	1	19	196	215	196	220	0.69
5	16	2.1	1.7e+02	4.5	0.5	2	23	226	248	225	248	0.95
6	16	3.3	2.7e+02	3.9	1.3	1	19	298	316	298	319	0.80
7	16	0.46	37	6.6	0.1	1	23	441	463	441	463	0.96
8	16	1.8e-05	0.0015	20.4	0.8	1	23	472	494	472	494	0.99
9	16	0.0018	0.15	14.1	3.1	1	23	500	523	500	523	0.97
10	16	0.0016	0.13	14.3	2.8	1	23	886	909	886	909	0.96
11	16	0.0011	0.089	14.8	0.4	2	23	1120	1141	1119	1141	0.97
12	16	0.19	15	7.8	6.1	1	23	1147	1170	1147	1170	0.97
13	16	0.95	76	5.6	4.4	1	20	1195	1215	1195	1219	0.93
14	16	0.026	2.1	10.5	1.0	1	23	1277	1300	1277	1300	0.95
15	16	0.037	3	10.0	0.4	3	23	1347	1367	1345	1367	0.93
16	16	0.017	1.3	11.1	5.9	1	23	1373	1395	1373	1395	0.98

Sequence Information

Coding Sequence: ATGGAAACATCCCAAAAAGCCGCTCCGCATACCAAAGATTCAGACCAAAGCACCAGAAGTGACTCTGGCATATTCTCCGCCACAACAAACTCGACCCTCCCCGACGAGCCAATGGATTCCAGCTGCCAGCAAAACTCGAGCGACGATTGCCGCAGCGACTGCAGTTCCCCAGACCGCCGTTACTTCTGTCCTATCTGCAAGACAACCCTCACTTCCCAACACGAATTCACGATTCATATCCGTTCGCATAACACCGACCAGGAATGTCAAGAAGACAGAGGTTTCACTTGTAGTATCTGCAAGAAAGTGTTGAGCTCTAGTTCCAGTTTGGACAGGCATGTGTTGGTGCACAGTGGTGAGCGTCCTTTTACTTGTAAACACTGCGGGGATAAGTTCACGACGAACGGGAACATGCATCGTCACATGCGGACACACAAGAGCGAGAATTACGAGTCTGATTGCAGTACGGATAGTAATGCTAGTAAAAGCGTGGAGTTTAACAACAATAAGGTTGATAACAAGAGAAAATGGGAGGACGTGGAAGGTGGTAGCAATAAATATCCTAGGACTGATGAAGCCAACGAATACAAGTGTCCGGTTTGCGAGAGAACTGATTTTGACACTTTGAAGTCGTATGAAATGCATTTCGAGGATAACCACCCTGATTATCCTGTAAAATGTGGGGATTGTCGCTTGGTGTTTCAAGGCACTAGGAACTTGAACTTCCACAGAAACACAGCTCATCCTGCGGAAGACGGGATGAAAACTTGTAAAAGTTCGGTGACTGGTTTTAAAGATTTGACGTTTGTGGATTTTTCGAGCAATAAATTCCCGCACATTGCTCGGTACGAGTGCGAGAGGAACCTGCATAAAGCCACCCAGGGTTTGAAATTCCAGTGTACCAAATGCTCTAGGGCTTTTCCTTGCGCAACTTCTCTGGACATCCACGAACAGCATTGCAGTTTGGGCCTGGATTTGAGTGTTAGAACCGACGTGAAAGACAGCGATATAAGGCGTGATAATTTCTTCGCATGTCTCGATTTGCAAAATAAGTCTCCGGAGAAGAATGGTTATGCTGCCAACAAAATCACTCAGCAACTTCTGGGGCCAAGTGTCAAAACATCCATTGATTCCTGCAAGGACTTAGCCGATATACAGTCGATAATTTCGATGACGAGTGGCAGTCTCCTGCACCAATTGGGCCAAAAGTCTCTCGATACTTCAAGTAAAGAGCAAGTGGAGATGCAGCAGAAgaacgaagaagaagaagcccAGGACGTGTTCGCTACGGAGTTTCGTAAAATGAAGCTGCGCGGGGAGTTTCCCTGCCGACTTTGCACCGCAATATTCCCCAATTTGCGCGCCCTCAAGGGCCACAACAGGGCACACTTGAACGGCAACAACAACGGCACGTATCGCTGCAACATGTGTCCCCATTCCTCGATAGATAAAGCCGCTCTCATCCGGCACATGAGGACCCACAATGGCGATAGACCGTACGAGTGTTCTTTGTGCAACTATGCTTTCACCACCAAAGCGAACTGCGAGAGGCACTTGCGCAATAGACACGCGAAAAACACTCGAGAAGAAGTCAAGAAATCCATAATCTACCACCCCTCGGAAGATCCAACTAATGACGATGTCAAAATTAATTTACGTGAAGAATCGAAGAAGATAATGAACTTGAATACCACTACGGACGATAGAATAAGATCGCCCACTCCCAAGCTGCCCCTAATCCTTCCAGAACCCTTGAAACCTGATCCGTCTTCTCACCCAATCCCCACGACCCTCAACAAATTTGCTGCTCCAAATCTGAACGTTGAAAGAATGTTGAAAGAACCGAGAGTAGAAAAAAGCAACCATCCTTTCATGCCTCGCTTCAGCTTCTCTCCGAAATTAACGAATATTTCCACCCCGGCCAAAATACAAGTCAGAAATTTCGAGAGTTTACAAGAAGATTCTGATTCGAACTCGTGCAATGAGGATAGCAACAACGAAAGTTTCGAGCACCCGATGGATATGGTCCTGGATTTGAGCAAAAAGAAAGTCGTCGAAGACACTGAACCGAAACGGATTCATCCTGACGATGTTCCTGAAGATTTAAGCAAAAGAAACACCGAACCGAGCCAGTTGAATATGGGTGAAATTCTAGCTCAACAATTGCTGAAGAACACCCCGAAAATCGATCCGAGCAGCTTCTACGCTACTTTAGCTTTGTACCGCAATGGACTACCCTTACCCAACTGGCCCGGTTTTGCCCTAAATCCCCTACTTTACCCAAATCCTTTCCTAACTCAACCACCTCAAGATCTTCGAGAACGAGCCCAAAGATACCAGTTCAGTGGCGGCAGCATGATAGCAGATAATTTTGCAGAACGCTTGAAAACCTTGCAAAATCTCAACCAAAATTTGAGTGGCCTAAAATTGGGTGAAACCAAAACAGAATTTACACCAATCCCTAAACAAGAAGATCTGAAACCCTTAATGTTGAACGTCGAGCAAAATTATCCAGAAAGCGTCATGAAAGTACAAAGTCCCATTCCTCCAGCCAAACAAGAGTTGATACAGTCGCCAAACTCTGTAAAAATGGTGATTAAAAACGGAGTTTTGATGCCGAAGCAGAAACAGCGCCGTTACCGCACCGAAAGACCGTTCTCCTGCGAGCATTGTTCTGCCAGATTCACTCTGCGCTCAAACATGGAACGACACATAAAGCAACAACATCCGCAATTTTGGTCGCAAAGGCAGCGATCTAACGTCACCCATCCTGGAAGGAAAGCGCAAAGCTTGCCTGGCAATATGAAGACTTACTGCGACCTCACAGTACCTAATTTCGAGGCCCCCAAAGTCCAAGAGTGCGACGAAACTAGAGAGCATGTTAACGAGAAATTGAGGTACGCCATATTGGCGAATCATCTCCGTAATGTACAAgagtttaaacaaaatttctgTAACGAAGCAACGAAGAAAGAAGACGATGAAGGTAGTGATTTAGTTATAGATGAAGTTGAAGATAAAAATACGATCGAAATTGAAGACAAAAGGGAACGTTTTGATCAAGAAGAGAAGTGGAAGCAACTTCCGAAGATCAAAAATGAAGATGCTCAAGATTTGGTTCCCGTCTCGAGACTCTTGGATAACGCTTCCCAACAACAGTTCAAAGAGTATTTCCGGAGGAACGAACATGAAGGCGAAGGAATAAGTGAGGAAGATGAAGAGGGTTTGGTGGCCAGCGGTAGCACCAGCGAGGGCAACAACTCGGGCACTGATGAAAACAGATCTGAGTCTGACAATGCTCCAGCAACGAATACCATAAAGAAGAAGTCTGCGTATTCTCTGGCACCAAACAGGGTGAGTTGCCCGTACTGCAGTCGCAAATTCCCATGGACTTCGTCGTTACGTCGCCACATTTTGACGCATACGGGACAGAAACCGTACAAGTGCAGTCATTGTCCTCTTCTGTTCACCACTAAATCTAATTGTGATCGTCACTTGttgagaaaacatggcaatacGGCTACCACCGTCAGCAACGATGCTAGCGCAAATTATATGATGAGAAATGTACCGGAGAGGCCATTTAAGTGTTCCAGTTGTCCCAGCAGTACTTTCTCTACGTACTCCAACTTAAAAAAGCATATTAGTTGTAAGCATTCTTCGAATGTCGAAGGGGAAGATGCTAAAGCCCAAGGGTACGAAGCTGGAAGTTCAGAAGACGAAAAAGTGGTCGTGGAGCAAAAGAAAGATTGGGAAGCTCAAATTTCCCAATCCCGATTGAACGTAAACGACTCACAATCGGTGCAATTCCAAAATTCCGACTTACCGTTTAAATGCCATTTGTGTGAAAAGTCTTTTGGTGAACGTCAAGACGCTCTGGACCACATTCGAGACCAGCATTCCTCGGAATATGACCTACTCATGTCGAAAAATGCGCTGGACACCACCGTGACTACACCAGAGGAAGCTACAGCTCACGACGATGACGAGCACGAAATCCGAGGAAAATTCCCCGATTACTCGAACCGAAAAGTCATTTGCGCATTTTGCATGCGGCGGTTCTGGTCTGCGGAGGACCTGAGGAGGCACATGAGGACGCATACTGGGGAACGTCCATTCAGCTGCGACATTTGCAGGCGCAGGTTTACTTTGAAACACAGTATGCTGAGACATCGGAAAAAACACAATTTGTCTGTCGAAAACGATAACGTTAACAGTGACGAAGACGTTAATTTTAATACCGAGAAATTTGTTGTGAAAGAAACGAAGAGAGAAGAGAGGAAAACGACTGAGGAGTCTGATGGAAACGAGGGTGATTTGATCAGTAATTTGCTGGGGTTAAGGGATAAGTCGATTCTAGACCAGGTTTTGACCGCGTCTGCGGACGATGCCGCGAAACTGTTGGGTGTTAAAAATGGTGCAGTGCTGTAA
Protein Sequence: METSQKAAPHTKDSDQSTRSDSGIFSATTNSTLPDEPMDSSCQQNSSDDCRSDCSSPDRRYFCPICKTTLTSQHEFTIHIRSHNTDQECQEDRGFTCSICKKVLSSSSSLDRHVLVHSGERPFTCKHCGDKFTTNGNMHRHMRTHKSENYESDCSTDSNASKSVEFNNNKVDNKRKWEDVEGGSNKYPRTDEANEYKCPVCERTDFDTLKSYEMHFEDNHPDYPVKCGDCRLVFQGTRNLNFHRNTAHPAEDGMKTCKSSVTGFKDLTFVDFSSNKFPHIARYECERNLHKATQGLKFQCTKCSRAFPCATSLDIHEQHCSLGLDLSVRTDVKDSDIRRDNFFACLDLQNKSPEKNGYAANKITQQLLGPSVKTSIDSCKDLADIQSIISMTSGSLLHQLGQKSLDTSSKEQVEMQQKNEEEEAQDVFATEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRAHLNGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKNTREEVKKSIIYHPSEDPTNDDVKINLREESKKIMNLNTTTDDRIRSPTPKLPLILPEPLKPDPSSHPIPTTLNKFAAPNLNVERMLKEPRVEKSNHPFMPRFSFSPKLTNISTPAKIQVRNFESLQEDSDSNSCNEDSNNESFEHPMDMVLDLSKKKVVEDTEPKRIHPDDVPEDLSKRNTEPSQLNMGEILAQQLLKNTPKIDPSSFYATLALYRNGLPLPNWPGFALNPLLYPNPFLTQPPQDLRERAQRYQFSGGSMIADNFAERLKTLQNLNQNLSGLKLGETKTEFTPIPKQEDLKPLMLNVEQNYPESVMKVQSPIPPAKQELIQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNVTHPGRKAQSLPGNMKTYCDLTVPNFEAPKVQECDETREHVNEKLRYAILANHLRNVQEFKQNFCNEATKKEDDEGSDLVIDEVEDKNTIEIEDKRERFDQEEKWKQLPKIKNEDAQDLVPVSRLLDNASQQQFKEYFRRNEHEGEGISEEDEEGLVASGSTSEGNNSGTDENRSESDNAPATNTIKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPYKCSHCPLLFTTKSNCDRHLLRKHGNTATTVSNDASANYMMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSSNVEGEDAKAQGYEAGSSEDEKVVVEQKKDWEAQISQSRLNVNDSQSVQFQNSDLPFKCHLCEKSFGERQDALDHIRDQHSSEYDLLMSKNALDTTVTTPEEATAHDDDEHEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNLSVENDNVNSDEDVNFNTEKFVVKETKREERKTTEESDGNEGDLISNLLGLRDKSILDQVLTASADDAAKLLGVKNGAVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -