Xruf009862.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xestobium rufovillosum
Gene Symbol
-
Assembly
GCA_963966045.2
Location
OZ014493.1:43680995-43695062[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 5 4e+02 3.3 1.1 1 23 5 28 5 28 0.94
2 41 0.34 27 7.0 0.7 2 23 135 157 134 157 0.94
3 41 3.4 2.7e+02 3.9 0.3 2 23 199 221 198 221 0.94
4 41 0.018 1.5 11.0 0.3 1 23 221 244 221 244 0.96
5 41 0.016 1.3 11.2 4.1 3 23 248 269 246 269 0.95
6 41 0.0035 0.28 13.2 0.5 2 23 311 333 310 333 0.93
7 41 1.3 1e+02 5.2 0.6 1 23 333 356 333 356 0.93
8 41 0.1 8.2 8.6 0.9 3 23 360 381 359 381 0.95
9 41 0.014 1.1 11.4 0.6 2 23 424 446 423 446 0.92
10 41 0.0026 0.21 13.7 0.5 1 23 446 469 446 469 0.93
11 41 0.11 9.2 8.5 0.3 2 23 472 494 471 494 0.95
12 41 0.0028 0.23 13.5 1.8 2 23 573 594 572 594 0.97
13 41 2.5 2e+02 4.3 0.9 2 23 601 623 600 623 0.88
14 41 0.15 12 8.1 0.2 1 23 623 646 623 646 0.96
15 41 0.0091 0.73 11.9 0.1 1 23 650 672 650 672 0.94
16 41 0.067 5.4 9.2 0.5 2 23 722 744 722 744 0.96
17 41 1.7 1.4e+02 4.8 0.7 2 23 823 845 823 845 0.92
18 41 0.0066 0.53 12.4 1.2 2 23 871 893 870 893 0.92
19 41 0.003 0.24 13.4 0.7 3 23 898 918 897 918 0.97
20 41 4.3 3.5e+02 3.5 0.7 2 23 925 947 924 947 0.92
21 41 0.11 9 8.5 1.0 1 23 947 970 947 970 0.97
22 41 0.003 0.24 13.4 0.3 1 23 974 996 974 996 0.96
23 41 0.95 76 5.6 1.8 1 22 1058 1079 1058 1079 0.93
24 41 0.00039 0.032 16.2 0.4 1 23 1081 1104 1081 1104 0.97
25 41 2.9 2.3e+02 4.1 3.0 1 23 1126 1149 1126 1149 0.94
26 41 1.9 1.5e+02 4.6 1.2 3 23 1153 1174 1151 1174 0.92
27 41 0.0039 0.31 13.1 0.7 2 23 1184 1206 1184 1206 0.90
28 41 0.12 9.7 8.4 0.2 2 23 1220 1241 1219 1242 0.95
29 41 0.0045 0.36 12.9 0.2 1 23 1246 1268 1246 1268 0.96
30 41 2.8 2.3e+02 4.1 0.5 1 21 1323 1343 1323 1344 0.92
31 41 0.17 13 8.0 0.2 1 23 1346 1369 1346 1369 0.94
32 41 0.23 19 7.5 0.2 2 19 1404 1421 1403 1422 0.90
33 41 6.7 5.4e+02 2.9 3.3 1 23 1426 1449 1426 1449 0.94
34 41 3.4 2.7e+02 3.9 3.2 3 23 1453 1474 1451 1474 0.92
35 41 0.14 11 8.3 0.2 2 23 1488 1510 1487 1510 0.89
36 41 0.31 25 7.1 0.1 2 23 1524 1546 1523 1546 0.96
37 41 0.32 26 7.1 0.1 1 23 1550 1572 1550 1572 0.96
38 41 2.8 2.3e+02 4.1 0.5 1 21 1627 1647 1627 1648 0.92
39 41 0.00034 0.028 16.4 0.4 1 23 1650 1673 1650 1673 0.96
40 41 1.4 1.1e+02 5.1 2.3 1 23 1692 1715 1692 1715 0.97
41 41 2.8 2.3e+02 4.1 1.3 1 23 1715 1738 1715 1738 0.96

Sequence Information

Coding Sequence
ATGAAGGAGTTTCATGACTGTGAAGCTTgcccaaaacaatttttaaagaaGAATGAACTGGATGAACATAAGAAGACTGTTCACCCCACAAGAAAGGCCCGTTTTGTTAAAAAACATCCAGAAGCCAAACCGGAGTGTAATACGGTCCATAAATCTACTGAGGTTGACACGGATATTTCCCAAGAAGCCATCGATCATTCCGATCAAGCTCAATCaaataatttaacaaatttaatgGAAGTTACTGTTTCCGAAACACAGTGTGAAATTTATCCGACGCTTTGTAAAACGGAGAGAGATGAGAATCAGCACATAACTGGAACTTGTCAGTGTGACCTTTGCCCAGAGCAGTCTTTAACAAAACTTGAGTTATCGGCACACAAGAAAGCAGTTCATGGTGTGGAGTGTACAATTTGCAAAATCACGTTTGCTACAACAACTATTCTAAGGACTCATTTTCGCCAGACGCATTTGCAACTCAGATCAGGAAAGCTGAGCGACTCAACCGACactaaaatacatattttcgAAGAAGCAGCTAAAGAAAGTACTCGTCGAGCTCAAACTAGTACTGTAACAAATGTTTCTGAAAAACAGTGCGAAATGTGTACGAGGCTTTTCGAAACCGAGGAGGCCAAAAATCTGCACTTGTCTGTCACTCATAATTGTGACCTTTGCCCAGAGCAGTTTTTTAAACGACCTGAGTTGAGGGCACACAGGGAAACCGTTCACGGCGTCATCTGCACGATTTGCAAAAAGAGATTTGAAACAACAGAGAGTCTAAGTGTTCATTATCGCCACTGTCATTTGCAACCCACATCAAAATCCACTGAGGCCAAAAAGCATAGTTCTGAAGAAGTTTTTCAAAGTAAGGATCAAACGTTATCAAGTAAGGTAACAAATTTAGCGAAACTTGCTATTTGCAAAAAAGAATGCGAAATTTGTGGGCTccgttttaaaagaaaaagggaAAAAGAACGACACGTACTTTATATTCATAATTGTAGCATTTGCCCTCAGCagtttttaaagaaattgcAGTTGCTTGCACACAGGAAAGCAGTTCACGGTGTGTTCTGCgcaatttgcaaaataaactttaaaACAACAGAAAAGTTAGTTGTTCATCATCGTGCGGTACATTTGACACTCAAACCAGAGCAAGGCGAATTCACCGAGGCTGAAAAACATATTTCGGAAGAGGTAATGGAGAGTAATAATCAAACTCAATCTATTGTAACAAACTTAGTTGAAGATGGTCCTAAAATTCAGTGCGAAATTTGTAAGAAGTTTTTTAAAACCGAAGACGGCAAAAATCAACACATAATCGCTACTCATAACTGTAATCGTTGCCCAGAACAGTTTCGAAACAGATCGCTGCTGATTTCACACTGGAATGCCGTTCATAGCGTGGTCTGCTCAATTTGCAAAATGACATTTGAAACAACTATTAAAATGGCTACTCATTATCGTCAGGCGCATTCGGAACCCAGCCCTAAAGTCACTGAGGTCAACAAACATATTTCCATTGAAGTAATCGAAAGTAATGATCAAACTCAATCAAGTAATGGAACAAATTTAGTGGAAGTTGCTATTCCGAAAGCAAGGTACGAATCTACCGAGACCAGTACTCAAGAAACCGTCGAAAGTGATAATCAATCCCAAACTACTGCAACAAATTACCGTCAGGAGCACTTGGAATCCACGCCAGACATGCGCTGCTCAATTTGCAAATGTTCCTATGTATCAGAGAGTGCATTTGTGGAGCATATGCGGAAGCATTATTCAAACTTTGGAGTACAATGTGAAATGTGCACACAATCGTTCGTCACTGAGTTACGCAAACAAAAACATTGGAAAGAGGACCACGAATGTCTCTTTTGTCCggaaatttccataaataaaaCAGAATTGCTTGAacacattaaaatttttcacaaGAGGCAACATTCCTGTGGGATTTGTGGGGAATCTTTCACTTTGGAAGCTGAATATGAAACACACTTAGATGAACATAAAATAGAAAGGCCAAATGAGGGCCAGGAATCAGGTTGGGCACAAGAAGATTTTGAGCAAACTTATGATTCGTCGGTTATAATAAACCCTTTCGATGGGACTCCCATTACCTTAATAAAAAGTAGTGAACCTGTTATTTCCAAAGAAAAGTGCGAAATTTGTTCGAAACTTTTCGATAGTAAAGATGATAAAGAATGGCACAAAAAATCTGTTCATCAGTGTGTTCATTGCCCATTACTGTATCTTGAGGAATCTTTGTTGGCTGCACACAAGAAGAGATTTCACGGAATTCTTCTCACCGCGAATTTCTTTTACAGGTTGCAAGTTCAACATCTCATCAACCCGCTTCACTTGGTTTCGAAAAAAACGCGTAAAGAAGTAATCGAAAATAATGATCAAGCTCAATcaaataatgtaaaaaatttGGTAAAACTTCCTGTTCCGAATGCAAAGTGCGAATTTTGCACGAAGCTATTTATAACGAAAGAAGCTAGAGATAAGCATTTAAGTGAAGCTCACGAACATCTTCTTCTGCCGAAGcagctaaaaataaaaattaagttgcCTGCACAGAAGCAAGTATTTCACCACGTGGTCTGCAAAATTTGCAAAATGACGTTTGAAACGAAAACTAAACTAAGAATTCATTTTGATCGGACACATTTTTCAAAGCACTGCGCAAATTGCAACTATTCTTTCGAATCAGAGAGTGCTTATGCGGAGCATATGCAGACGCATGAGCGACAGTCTACGATACAATGCGAAATATGTGCACAAAAGTTTTTCACCAAGCTATCAAAAGAATTGCACTGGAGAGAGAACCACAAATGTCCTTTTTGCCcgaaattttctttaaataaaacAGGTTTGACCGAACACATTAAAATATTTCACGAACAGAAATATTCCTGTCGAATTTGTAACGAATCTTTCACTGTAAAAGTCGATTATGAATCGCATCTGGATGAACACGAAACGCAATTGCAGTCAGTGAAGTACTTAGGAGGGAGTAGTGGTTGCAAAGACAAATATGACGTGGCAAGTGAGGGACACAAAAAATCAGAATCTGCGGTTCATTTGGTTAACGCCCAAGAAAGTCTTGAGAGCACTCACGAATTAATAAATCCGTTCGATGGCACCCCCGTTGTTGATTGCCACGAATGTCGTCGCTGTTCTCAGCTATTTACAAGCAAAGAGCTTCTGAGCAATCACAGTAAAACATGTTTCGTATGTTCCACTTGTGGAACAAAATTATCTGACAGAATAAATTTAGAGAGGCATCAAATAAAAATGCACggcaataaaaattataaaGTCTTACCAACCGAGGATCATAAAAATAACCACATAAGGATAACTCATCAATGCCATATTTGCCCAGAACAGTTTTTAACACATCTTGAAATGGTTGCACACAAAAAGACAGTTCACCCCGTAATTTGCGAACTTTGCGGGGCGAGATTTTGTTCATCAAGACGACGAGCGGCGCATCGCATTAAAAAACATCCAGAAATCAATCCTTCACAGTTGCGGGTctgcaaaatttgcaaaaagCCGTTTAAAACACAAGCTGAATTAGGGGCTCATTTTCATCAGGCACATTTAAAACCGAAGCCGAGCAAGCGCTGGAGAGAAGAACAGAAATGTCCCCTTTGTCCAAAAGTTTCTTTGAATGAAGCCGACTTATCTGACCACATTAAAGTACATCACGAAAAGGAATATTCCTGTGGAATTTGTAAGGAATCATTCACATTAAAAGCTGAGTATGAAACGCACCTGGATGAGCATGAAACGCAATTGCAGTCAGTGATTTACTCTGAGGGAAGTAACATTAGCAAAGAATCAGAGTATGTTGGGGGTAGTTCTCCTCATTTGGGTCTCGCCCAAGAAAGTCTCGAGAGCACTCACGAATTAATAAATCCGTTCGATGGCACCCCCGTTATTGATTGTCACGAATGTCTTCGCTGTTCTCAGTTATTCACAAGTGAAGCACTTCTCAACGATCACAATAAAACATGTTTCGTATGCCCTGTATGCCGTGAAAAATACACCGATATAAAAAGTTTTGGAAACCACCTATTAGAAATGCACGGCAGTAACGAAGTTAATAATAGTAACAATGAAGTAACAGAACCTAAGCAAGCTTATAAGTCGCAAGTTCAAATCCATCTACCGAATTTGGATTCCAAATCAAcgtgtgaaatttgccaaaagaCCTTTCCAACCGTGGagcttaaaaataaacacgtgTGGCAAAATCATCAATGCCATGTTTGCCCAGAACAGTTTTTAACACATCTTGAAATGGTTGCACACAAAAAGACAGTTCACCCCGTAATTTGCAAACTTTGCGGGGAGAGATTTTGTTCAACAAGACGACGAACGGTGCATCGTATTAAAAAACATCCAGAAACCAATCCTACACAGTTGCCTGCAGAGAAGCAAGTCtgcaaaatttgcaaaataCCGTTTGAAACACAAGCTGAATTAGGGGTTCATTTCCATCAGGCACATTTAAAACTGAAGCCGAACAAACGCCGGAGAGAAGACCAGAAATGTCCCCTTTGTCCAAAAGTTTCTTTGAATGAAACAGATTTATCTGACCACATTAAAGTATATCACGAAAAGGAATATTCCTGTGGAATTTGCAAGGAATTATTCACATTAGAAGCTGAGTATGAAACGCACCTGGATAATCATGAAACGCAATTGCAGTCAGTGATTTACTCCGAGGGAAGTAAAATGAGCAAAGAATCAGAGTCTGTTGGTGGTAGTTCTCTCCATTTGGGTGTCGCCCAAGAAAGTCTCGAGAGCACTCACGGATTAATAAATCCGTTTGATGGCACCCCCGCTGTTGATTGTCACGAATGTCTTCGCTGTTCTCAGTTATTTACAAGTGAAGCACTTCTCAACGATCACAATAAAACATGCTTCGTTTGTCCTATATGCCGTAAAAAATACACTGATATAAAAAGTTTAGAGAACCACCTAAAAGAAATGCACGGCAGTAACGAAGTTAATAATAGTGACAATGAAGTAACAGAACCTCAGCAAGTTTATAAGTGCGAATTCTGTTCAagcatttttaattcttttcagGCTCAAAAACGGCACAAAAGAAATGTTCATCGGTGTGTTCATTGCCCAGGGCAATATTTCCCAAAACCTTTATTGATTGAACACAGAAGGAAATTTCACGGTGTGAACTTAGACCGCTCGTCTAAAAAACTTGCAACAATTACAGCTAAGCCATTTGAATCAACTAACGAAACATATGGGTCCTAG
Protein Sequence
MKEFHDCEACPKQFLKKNELDEHKKTVHPTRKARFVKKHPEAKPECNTVHKSTEVDTDISQEAIDHSDQAQSNNLTNLMEVTVSETQCEIYPTLCKTERDENQHITGTCQCDLCPEQSLTKLELSAHKKAVHGVECTICKITFATTTILRTHFRQTHLQLRSGKLSDSTDTKIHIFEEAAKESTRRAQTSTVTNVSEKQCEMCTRLFETEEAKNLHLSVTHNCDLCPEQFFKRPELRAHRETVHGVICTICKKRFETTESLSVHYRHCHLQPTSKSTEAKKHSSEEVFQSKDQTLSSKVTNLAKLAICKKECEICGLRFKRKREKERHVLYIHNCSICPQQFLKKLQLLAHRKAVHGVFCAICKINFKTTEKLVVHHRAVHLTLKPEQGEFTEAEKHISEEVMESNNQTQSIVTNLVEDGPKIQCEICKKFFKTEDGKNQHIIATHNCNRCPEQFRNRSLLISHWNAVHSVVCSICKMTFETTIKMATHYRQAHSEPSPKVTEVNKHISIEVIESNDQTQSSNGTNLVEVAIPKARYESTETSTQETVESDNQSQTTATNYRQEHLESTPDMRCSICKCSYVSESAFVEHMRKHYSNFGVQCEMCTQSFVTELRKQKHWKEDHECLFCPEISINKTELLEHIKIFHKRQHSCGICGESFTLEAEYETHLDEHKIERPNEGQESGWAQEDFEQTYDSSVIINPFDGTPITLIKSSEPVISKEKCEICSKLFDSKDDKEWHKKSVHQCVHCPLLYLEESLLAAHKKRFHGILLTANFFYRLQVQHLINPLHLVSKKTRKEVIENNDQAQSNNVKNLVKLPVPNAKCEFCTKLFITKEARDKHLSEAHEHLLLPKQLKIKIKLPAQKQVFHHVVCKICKMTFETKTKLRIHFDRTHFSKHCANCNYSFESESAYAEHMQTHERQSTIQCEICAQKFFTKLSKELHWRENHKCPFCPKFSLNKTGLTEHIKIFHEQKYSCRICNESFTVKVDYESHLDEHETQLQSVKYLGGSSGCKDKYDVASEGHKKSESAVHLVNAQESLESTHELINPFDGTPVVDCHECRRCSQLFTSKELLSNHSKTCFVCSTCGTKLSDRINLERHQIKMHGNKNYKVLPTEDHKNNHIRITHQCHICPEQFLTHLEMVAHKKTVHPVICELCGARFCSSRRRAAHRIKKHPEINPSQLRVCKICKKPFKTQAELGAHFHQAHLKPKPSKRWREEQKCPLCPKVSLNEADLSDHIKVHHEKEYSCGICKESFTLKAEYETHLDEHETQLQSVIYSEGSNISKESEYVGGSSPHLGLAQESLESTHELINPFDGTPVIDCHECLRCSQLFTSEALLNDHNKTCFVCPVCREKYTDIKSFGNHLLEMHGSNEVNNSNNEVTEPKQAYKSQVQIHLPNLDSKSTCEICQKTFPTVELKNKHVWQNHQCHVCPEQFLTHLEMVAHKKTVHPVICKLCGERFCSTRRRTVHRIKKHPETNPTQLPAEKQVCKICKIPFETQAELGVHFHQAHLKLKPNKRRREDQKCPLCPKVSLNETDLSDHIKVYHEKEYSCGICKELFTLEAEYETHLDNHETQLQSVIYSEGSKMSKESESVGGSSLHLGVAQESLESTHGLINPFDGTPAVDCHECLRCSQLFTSEALLNDHNKTCFVCPICRKKYTDIKSLENHLKEMHGSNEVNNSDNEVTEPQQVYKCEFCSSIFNSFQAQKRHKRNVHRCVHCPGQYFPKPLLIEHRRKFHGVNLDRSSKKLATITAKPFESTNETYGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-