Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014499.1:11054555-11066778[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.8e-05 0.0046 18.9 3.2 2 23 200 221 199 221 0.98

2 11 4.4e-06 0.00036 22.4 1.2 1 23 227 249 227 249 0.99

3 11 0.00028 0.023 16.7 5.2 1 23 257 279 257 279 0.97

4 11 0.0011 0.088 14.8 1.5 1 23 285 307 285 307 0.98

5 11 0.009 0.72 12.0 0.2 1 23 319 341 319 341 0.96

6 11 8.7e-07 7e-05 24.6 2.3 1 23 347 369 347 369 0.96

7 11 3.6e-05 0.0029 19.5 0.5 1 23 375 397 375 397 0.99

8 11 1.9e-06 0.00016 23.5 0.6 1 23 403 425 403 425 0.98

9 11 0.00013 0.01 17.8 1.5 2 23 432 453 431 453 0.97

10 11 7.2e-05 0.0058 18.6 0.1 1 23 459 481 459 481 0.99

11 11 1.3e-07 1.1e-05 27.2 0.5 1 23 487 509 487 509 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.8e-05	0.0046	18.9	3.2	2	23	200	221	199	221	0.98
2	11	4.4e-06	0.00036	22.4	1.2	1	23	227	249	227	249	0.99
3	11	0.00028	0.023	16.7	5.2	1	23	257	279	257	279	0.97
4	11	0.0011	0.088	14.8	1.5	1	23	285	307	285	307	0.98
5	11	0.009	0.72	12.0	0.2	1	23	319	341	319	341	0.96
6	11	8.7e-07	7e-05	24.6	2.3	1	23	347	369	347	369	0.96
7	11	3.6e-05	0.0029	19.5	0.5	1	23	375	397	375	397	0.99
8	11	1.9e-06	0.00016	23.5	0.6	1	23	403	425	403	425	0.98
9	11	0.00013	0.01	17.8	1.5	2	23	432	453	431	453	0.97
10	11	7.2e-05	0.0058	18.6	0.1	1	23	459	481	459	481	0.99
11	11	1.3e-07	1.1e-05	27.2	0.5	1	23	487	509	487	509	0.98

Sequence Information

Coding Sequence: ATGGAGGTTAAACATGAGACCAGTCAATTTGATATAAGTAAAATATGTAGGACCTGTTTAACTGAAAAGGGTGAAATGCGGTCGGTTTTTATGGGTGATGAGACCATAGGACAGCCCATGATTCTTGCAGACATGATTATGGGGTTCTCCACCATacagATCGAAAATGGAGATGGGCTACCTACCCTAATATGCCTTCAATGTGTCCACCAAGTCAGTCGTGCCTATTCTTTCAAACAACTGTGTGAACAGTCCGATATAAATCTTCGTCAATACTTAGGAAAGCCTCTGAACTCAAAATCATGCAAAATTGAAGAAACTACAATCCACAGCAATGATTTATATTCTTCTAGTTTACTGTTGGATAACTTCGGTTTGGATGATTCTTCAAATGACAGTGATGATGATTTCAAACAAGACTTTGAGTTGCTTGAATCTGGTATTTCGGAAACAGCTAACGATGAAAAAGCAGTTGCTCAGAGACAGTTGCTTAAAGCTGCCAAAATGCAGAAACATAAAATATCGAAGAGGAAATTGCTGGCCAAGAGCGGAAAAGCCGGAATTTTagcttcaaaaaaattaaaacgtaacaccAACCAATGCAACGTGTGCAAGAAACAATTCATAAACCTAAAGTCATTCCGAAAACATCTTCGTACCCACATAGAAGACAGGCCATACAAATGCAAGCTCTGTCCTCGAGGTTTCACAGAAGAAAATTACTTGAACAATCACATGCGTACGCACATCCCCGAAGACCAGAAACCCCACGAATGTAAAATCTGCAAGAAACGTTTCATTCACGAAACATTGCTAAATAAACACTTGCTAAAGCATTCCGGTGAAAAACCTTTCGTTTGTAAGATTTGTAACAAAGGTTGTTACGCTGAAAACAGTTTACTGAAACATATGAAAATACACGAGAAGAAAGAAGGTGATCCTGCTCTTTTGAAACACATATGTGATTACTGCAAAAGTGAGTTTCCTGATGCGCCTACTTTGGCTGTTCATATTAAACAACATACGGGCGATCGGCCGTTTTTATGTAATATTTGTGGGAAGTGCTTTCCGCAACGGTTCAACTTGGAGCTGCATCTACGAACTCATACAGGAGAGCGTCCATTCACCTGCGAAGTTTGTAAGAATGGTTACGTTTCGAAAGCAAGCTTGAAAATCCACATGCGTACACACACCAACGAACGCCCATTCGTCTGCGACTTTTGCGGCAAAGCTTTCCGCCAATCTGGAGATCTAACAAGCCATAAAAGACTGCATGGTACTGAGAAACCAATTGAGTGTTCCGTTTGCCAGAAAAGATTTACCACAGTGATGAAATTGAAGTACCATATGAGAAACCATACAGGGGAACGGCCGTACGTTTGCACTGTTTGTGGAAGAGGCTTTACGgttaatacaattttattgcggCACATGAGGGTTCATTCCGGGGAGAGACCTTATGTTTGTGTTACTTGCGGAAAAGCATTTTCTCAATCTAGCACACTGAATACGCACATGAAGGTGCATGCACCTTCGCCAAAGTACCACACACAAGAAACTCAAcaacagcagcagcagcagcagcagcagcagcaacgtATGCCAAAATATCACAACACCAATGAACAACAAAAATACCAACACGCTCCTAATGACCAGAGCAACCGTTTGATGCAACAGGATAACCGTATGATGCAGCAAGAAGCTCCCCGTATGCTCCAACAAGATAACACTCGTCTCATGACCAACGACGGTACTAGGCTTTTAAACGATAACTCTCATTTACTTGGAGATAACAGAGGTTTATTGACGAACGATAATCGGCTGCTGACCAATGACGGTACAAGATTGTTGGTAAATGTTAGTGAGCCACCTAGGTTGCTTGTTAATGATACTACTCGATTGTTGCCAGGAGATAATAGACTGCTTACGAACGACACTAGGTTAATAGGGAATGTCAATGATAATAACAGACTGTTGGGTGATAACAATAGGTTGTTAACAAACGATCGACATTTGGCTGTTATTGAGGGTACTAGACTGTTAGCCGACAAGTATTTGGCAAATTATGATCCTTATCATAGAGGGCATTTGTAG
Protein Sequence: MEVKHETSQFDISKICRTCLTEKGEMRSVFMGDETIGQPMILADMIMGFSTIQIENGDGLPTLICLQCVHQVSRAYSFKQLCEQSDINLRQYLGKPLNSKSCKIEETTIHSNDLYSSSLLLDNFGLDDSSNDSDDDFKQDFELLESGISETANDEKAVAQRQLLKAAKMQKHKISKRKLLAKSGKAGILASKKLKRNTNQCNVCKKQFINLKSFRKHLRTHIEDRPYKCKLCPRGFTEENYLNNHMRTHIPEDQKPHECKICKKRFIHETLLNKHLLKHSGEKPFVCKICNKGCYAENSLLKHMKIHEKKEGDPALLKHICDYCKSEFPDAPTLAVHIKQHTGDRPFLCNICGKCFPQRFNLELHLRTHTGERPFTCEVCKNGYVSKASLKIHMRTHTNERPFVCDFCGKAFRQSGDLTSHKRLHGTEKPIECSVCQKRFTTVMKLKYHMRNHTGERPYVCTVCGRGFTVNTILLRHMRVHSGERPYVCVTCGKAFSQSSTLNTHMKVHAPSPKYHTQETQQQQQQQQQQQQRMPKYHNTNEQQKYQHAPNDQSNRLMQQDNRMMQQEAPRMLQQDNTRLMTNDGTRLLNDNSHLLGDNRGLLTNDNRLLTNDGTRLLVNVSEPPRLLVNDTTRLLPGDNRLLTNDTRLIGNVNDNNRLLGDNNRLLTNDRHLAVIEGTRLLADKYLANYDPYHRGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00741130;
90% Identity: -
80% Identity: -