Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: zfh1
Assembly: GCA_963966045.2
Location: OZ014497.1:32555629-32560888[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.4 1.9e+02 4.3 0.4 3 23 169 190 167 190 0.88

2 13 1.5e-05 0.0012 20.7 2.0 2 23 221 242 220 242 0.97

3 13 0.0031 0.25 13.4 6.0 1 23 248 270 248 270 0.97

4 13 9e-06 0.00073 21.4 2.5 1 23 276 298 276 298 0.99

5 13 0.95 76 5.6 0.1 3 20 307 324 305 326 0.90

6 13 4.1e-07 3.3e-05 25.6 1.2 3 23 387 407 386 407 0.99

7 13 4.5e-05 0.0036 19.2 1.0 1 23 413 435 413 435 0.99

8 13 2.5e-06 0.0002 23.1 1.1 1 23 441 463 441 463 0.96

9 13 2.9e-06 0.00023 23.0 2.0 3 23 470 490 469 490 0.99

10 13 1.3e-05 0.0011 20.8 0.7 1 23 496 518 496 518 0.95

11 13 3.2e-07 2.6e-05 25.9 1.8 1 23 524 546 524 546 0.99

12 13 0.00064 0.052 15.6 4.6 1 23 552 574 552 574 0.98

13 13 0.00021 0.017 17.1 0.6 1 23 585 608 585 609 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.4	1.9e+02	4.3	0.4	3	23	169	190	167	190	0.88
2	13	1.5e-05	0.0012	20.7	2.0	2	23	221	242	220	242	0.97
3	13	0.0031	0.25	13.4	6.0	1	23	248	270	248	270	0.97
4	13	9e-06	0.00073	21.4	2.5	1	23	276	298	276	298	0.99
5	13	0.95	76	5.6	0.1	3	20	307	324	305	326	0.90
6	13	4.1e-07	3.3e-05	25.6	1.2	3	23	387	407	386	407	0.99
7	13	4.5e-05	0.0036	19.2	1.0	1	23	413	435	413	435	0.99
8	13	2.5e-06	0.0002	23.1	1.1	1	23	441	463	441	463	0.96
9	13	2.9e-06	0.00023	23.0	2.0	3	23	470	490	469	490	0.99
10	13	1.3e-05	0.0011	20.8	0.7	1	23	496	518	496	518	0.95
11	13	3.2e-07	2.6e-05	25.9	1.8	1	23	524	546	524	546	0.99
12	13	0.00064	0.052	15.6	4.6	1	23	552	574	552	574	0.98
13	13	0.00021	0.017	17.1	0.6	1	23	585	608	585	609	0.95

Sequence Information

Coding Sequence: ATGAGTGAATTAAATACTGATAATTTCAATAGTTTCGATGTTTGTCGGGTTTGTTTATTAGAGAGTTCAAGCATGAAAGATTTGCTGCAAGAAAATAGCGGCTGCATCCAACTTAGACAGATGTATAACGAAATTTCAAATATTAAGATAGAAAAAAGTAACGGCCTCCCCAGTTATTTATGCGTGCAATGCGAAGAGAAATTGGGGATGTGTTTTAACTTTCATAAACAATGCGAGAAATCGAATACGTATCTTCAAGAATACATCTATTCGAAATGTAAATCGGAAAAGAACGCGCCTATTAGTGATAATGATGAAGCTTCTAACGAATCAAATATGTCTGATAATGTCTGCGATGGTAACGATTCTGATTACGATCCCTCGGAAGACGTGAAAACGAAGAAAAAACATTCCAAACAAACTATGCGCTTAGCTCAGTATTCCTACGATCTCGTCACTGAAGCTATCGAGAAAGCGAAGAAGAAATTTCACGAAAACACTGAGTGTATTCAGTGTGGTTTTATCGGGAGTAATTCTAGAGCTTTATCTGTACATATGTCACATTTACACAAgGAATTAAAAGACTGTTGGTGTTCGCAATGTAACGCTAAAGTACCAAATCTTCAAGAACATCTCTCGGAGCACGGCAACGAAGACTTGAAATGTCAATTTTGCGATAAAGTATTTTCGGCTAAAGGTCATTTAACGGAGCATTTACGGTCCCATTCTGGCATACGCCCATTCAAATGCACGATGTGCGAGAAGGGTTTCATATCGTCGCGTCATTTGCGCGTACATTGCAAGACGCATTCAAACTCGAGACCGTTCAAATGCCCTTACTGTCCCAAGAAGTTCATCCACAGCATTTCGTGGAAGAAGCACTTGAAAGTTCATTCGGACAAAGTGAAATATGATTTTTGTCATCTGTGCGACGTGAAATTTGAGAACGCGGAAGAGGCTTTGATGCACATTGCGAATTGTGTTTTGAAGCAAGAAGACGGCAATGTTACAGCTACGCCGACAATACCTCCGCAGAACTTTTGCAAGCAATGTAATAAGAAAGTTCGGAGTTTGAATTCGCATCTTAAGCAATGCCATAAAGAAAAGAAGGAGCAGGCTTCGTGCAACGAATTCGGGGATACATTAGACAGTAAATTGTGCACAGTGTGCGGAAAACAGTTCAAAACTAGCTCAAAATTGAAAGTTCATATGAGGGTCCACACCGGAGAGGCCCCATACAAATGTGGATTTTGCGACAGGCGATTCGGAACAAGAAATCAGCTTGTTGTCCATGAACGTACACATACAGGAGAGAAGCCGCACATCTGTAGCGTTTGCGGAAAACGTTTTGCGCAATCCAGCGTCTTAAACACACATATGAGACTGCACACGGGACGTCCTGAGTTGTGCAAAATATGCGGCCAGAGGTTTTGTAGACCAGCGGAATTGAGACTGCACATGAGGAAACATACTGGTGAAAAGCCATTTTTATGCACCGAATGTGGACAGGCGTTCATACAAAGAAGCCACCTTATGGAACACGTAAAAATCCATAGTGACGAACGACCGTATCAGTGCCCGCATTGCGAAAGAGGCTTCAAACAGAGCTCTTCGTTAAAATCCCACATTCAAATACATTTAGgTTGTAGGCCATATCGATGCAGCCAGTGTTCGTACGCTTGCCGGCAAAGCTACAGTTTAACGCTACATATGAAACAACACGTGAGCGATTCTCCAAAGTTGGATAAACCTTACGCTTGTTCTGTATGTCAAAAAAGCTTCAGTACAATTGCCATGTTGAATTCACACGGACGTTTAATACATCACTTCGAGCATCCGTGTTAA
Protein Sequence: MSELNTDNFNSFDVCRVCLLESSSMKDLLQENSGCIQLRQMYNEISNIKIEKSNGLPSYLCVQCEEKLGMCFNFHKQCEKSNTYLQEYIYSKCKSEKNAPISDNDEASNESNMSDNVCDGNDSDYDPSEDVKTKKKHSKQTMRLAQYSYDLVTEAIEKAKKKFHENTECIQCGFIGSNSRALSVHMSHLHKELKDCWCSQCNAKVPNLQEHLSEHGNEDLKCQFCDKVFSAKGHLTEHLRSHSGIRPFKCTMCEKGFISSRHLRVHCKTHSNSRPFKCPYCPKKFIHSISWKKHLKVHSDKVKYDFCHLCDVKFENAEEALMHIANCVLKQEDGNVTATPTIPPQNFCKQCNKKVRSLNSHLKQCHKEKKEQASCNEFGDTLDSKLCTVCGKQFKTSSKLKVHMRVHTGEAPYKCGFCDRRFGTRNQLVVHERTHTGEKPHICSVCGKRFAQSSVLNTHMRLHTGRPELCKICGQRFCRPAELRLHMRKHTGEKPFLCTECGQAFIQRSHLMEHVKIHSDERPYQCPHCERGFKQSSSLKSHIQIHLGCRPYRCSQCSYACRQSYSLTLHMKQHVSDSPKLDKPYACSVCQKSFSTIAMLNSHGRLIHHFEHPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -