Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014500.1:7018814-7026601[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.001 0.083 14.9 0.4 1 23 198 220 198 220 0.95

2 12 9.5e-06 0.00076 21.3 0.3 2 23 225 246 224 246 0.97

3 12 1.1e-06 9.1e-05 24.2 0.9 1 23 252 274 252 274 0.98

4 12 1.6e-05 0.0013 20.6 2.8 3 23 282 302 280 302 0.96

5 12 1.3e-05 0.0011 20.9 0.1 3 23 310 330 308 330 0.97

6 12 8.5e-06 0.00069 21.5 1.2 1 23 336 358 336 358 0.98

7 12 1.3e-06 0.0001 24.1 0.4 1 23 364 386 364 386 0.98

8 12 0.00017 0.013 17.4 0.7 1 23 392 414 392 414 0.98

9 12 1.6e-05 0.0013 20.6 0.0 1 23 420 442 420 442 0.99

10 12 5.3e-05 0.0043 19.0 1.6 3 23 450 470 448 470 0.98

11 12 0.02 1.6 10.9 3.5 1 23 476 498 476 498 0.97

12 12 4.6e-07 3.7e-05 25.5 1.3 1 23 504 526 504 526 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.001	0.083	14.9	0.4	1	23	198	220	198	220	0.95
2	12	9.5e-06	0.00076	21.3	0.3	2	23	225	246	224	246	0.97
3	12	1.1e-06	9.1e-05	24.2	0.9	1	23	252	274	252	274	0.98
4	12	1.6e-05	0.0013	20.6	2.8	3	23	282	302	280	302	0.96
5	12	1.3e-05	0.0011	20.9	0.1	3	23	310	330	308	330	0.97
6	12	8.5e-06	0.00069	21.5	1.2	1	23	336	358	336	358	0.98
7	12	1.3e-06	0.0001	24.1	0.4	1	23	364	386	364	386	0.98
8	12	0.00017	0.013	17.4	0.7	1	23	392	414	392	414	0.98
9	12	1.6e-05	0.0013	20.6	0.0	1	23	420	442	420	442	0.99
10	12	5.3e-05	0.0043	19.0	1.6	3	23	450	470	448	470	0.98
11	12	0.02	1.6	10.9	3.5	1	23	476	498	476	498	0.97
12	12	4.6e-07	3.7e-05	25.5	1.3	1	23	504	526	504	526	0.99

Sequence Information

Coding Sequence: ATGGCAGAAGAAAACGTTACAGTAATCACAGACATAGATAAAATTTGTCGAACATGCCTCTCCGAAAAGAATTATGCTGATTTGCGTTCAGTATTTGAAAATTCGTTGGATTCTATGTTGCTGGGTTTAGCATCTGTTTCTGTTACTAAAGGAGATGGGATGCCCAGCTTTATTTGTGAACATTGCATCATGCAGCTTGGTATGGCTGTCAATTTTAAACAACAGTGCCAGAAATCGGAGGAGCAACTCAGAGAAGCTCTGTTTCCTTCTGCACGAAGTAATAGTAGTGTTAAGACTATTTTCATAAATGTTAATGACGTTGAAGTGCGGAGTGACAGTGCCGATGCCCATGCAAAAATTCAGGAAGTAGCTCTCAAAACTGAACCAAATTTGGATacaaataatgtaaattataatgAAATTGCTACGAATACGTCTAATGTAAATTTAAGGaataaTAACCTTCAGAAAATAAATTCGGAAGTAGCCATTAAAGATTTTGAGTCTGATGAATATGACACAGATTCTTTTGCTGCTGACGAAAGTAGCGATGAATCGGTGAAAAACGGTATAAAATCGAGTAGGGAAAAACACGAATGCCTGGAATGTGGCAAAACTTTTATGTTGGCAAGCGGTTTGAGAACTCACGCTGTAAAGCATGGGAAGAAACTTGTTTGCGAAGTTTGCGGAAAGGAATTCAGTTtagttaagtaTTTAAACAGTCATATGCGAACACACGCTGATTATAAACCACATAAGTGCAAAATCTGCGGAAAATCTTTTGCGTTAGCTCCAAGTTTAGTCAAACACCTTCGAACACATGGTGGAGAGAAGAAACATTTATGTACGATTTGTGGGAAAAGATTTTATGAGCCAGGACATCTTACAaTCCACACTAGGACACATACTGGAGAGAAGCCGATTATTTGCTCAATTTGCGGAAAAGGTTTTGCCGATCCTCACGGCTTAGTCGCACATACCAAAACTCACACCGGGGAAAGAAATTATGAGTGCAATGTTTGTGGAAAAAGGTTTGCTCATTCATTTGTATTGACTGCCCATAAAAGGGTCCATACTGGGGAGAGACCTTTTATATGTTCCATGTGTGGAGCATCCTTCGCCACTTCTTCTTACTTGACGATACACACAAGAACGCACACTCATGAGAGACCATACAAATGTGAATCTTGCCCAAAGgCGTTTGTTAGTAAATGTGCTCTTGTTGCGCACAATATGACACATACAGGGGAGAAAAAATTTCAGTGTGCCATATGTGGTAAAAGGGCAGCTAGGGCTGCAGACCTTGCAATTCACATGCGTTCCCATACAGGGGAGAAACCCTATGGCTGTGATCAGTGCCCAAAACGTTACCATACATCGAGCAACCTTGCCGCTCATAAACGTACTCATCTGGGTATAAGAGATCATGTCTGTGCCACCTGTGGTAAAGCTTTTGGCGATTCTCGTACCCTAAAGTGCCATAATCGCACTCATACGGGAGAAAAGCCATATGAGTGCCACATTTGTGGCAGAAGGTATACACAGTCAGGTCAGCTTGCTGCACACAGGAAAACACACTGGCAAAATAGTGTTGCTGAAGAGATTGGGCCAGTACAGTGA
Protein Sequence: MAEENVTVITDIDKICRTCLSEKNYADLRSVFENSLDSMLLGLASVSVTKGDGMPSFICEHCIMQLGMAVNFKQQCQKSEEQLREALFPSARSNSSVKTIFINVNDVEVRSDSADAHAKIQEVALKTEPNLDTNNVNYNEIATNTSNVNLRNNNLQKINSEVAIKDFESDEYDTDSFAADESSDESVKNGIKSSREKHECLECGKTFMLASGLRTHAVKHGKKLVCEVCGKEFSLVKYLNSHMRTHADYKPHKCKICGKSFALAPSLVKHLRTHGGEKKHLCTICGKRFYEPGHLTIHTRTHTGEKPIICSICGKGFADPHGLVAHTKTHTGERNYECNVCGKRFAHSFVLTAHKRVHTGERPFICSMCGASFATSSYLTIHTRTHTHERPYKCESCPKAFVSKCALVAHNMTHTGEKKFQCAICGKRAARAADLAIHMRSHTGEKPYGCDQCPKRYHTSSNLAAHKRTHLGIRDHVCATCGKAFGDSRTLKCHNRTHTGEKPYECHICGRRYTQSGQLAAHRKTHWQNSVAEEIGPVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -