Basic Information

Insect: Xestobium rufovillosum
Gene Symbol: -
Assembly: GCA_963966045.2
Location: OZ014503.1:24875347-24882089[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00022 0.018 17.0 2.4 1 23 409 431 409 431 0.97

2 18 0.00018 0.015 17.3 1.8 1 20 437 456 437 459 0.94

3 18 3.8e-05 0.0031 19.4 0.8 1 23 465 487 465 487 0.98

4 18 0.00012 0.0095 17.9 4.4 1 21 493 513 493 515 0.95

5 18 6.6e-05 0.0053 18.7 4.6 1 23 521 543 521 543 0.99

6 18 6.3e-05 0.0051 18.7 5.3 1 23 549 571 549 571 0.97

7 18 1.9e-05 0.0015 20.4 7.2 1 23 577 599 577 599 0.97

8 18 2.5e-07 2e-05 26.3 2.7 1 23 605 627 605 627 0.98

9 18 0.00018 0.015 17.3 6.7 1 23 633 655 633 655 0.97

10 18 2.9e-05 0.0024 19.8 5.5 1 23 661 683 661 683 0.97

11 18 4e-06 0.00032 22.5 3.0 1 23 689 711 689 711 0.98

12 18 6e-05 0.0048 18.8 7.5 1 23 717 739 717 739 0.98

13 18 7e-05 0.0057 18.6 9.1 1 23 745 767 745 767 0.98

14 18 4.2e-05 0.0034 19.3 7.7 1 23 773 795 773 795 0.98

15 18 2.7e-05 0.0022 19.9 7.1 1 23 801 823 801 823 0.97

16 18 0.00041 0.033 16.2 0.2 1 23 829 851 829 851 0.97

17 18 0.064 5.2 9.3 5.1 1 23 861 883 861 883 0.98

18 18 1.7e-06 0.00014 23.6 0.9 1 23 889 911 889 911 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00022	0.018	17.0	2.4	1	23	409	431	409	431	0.97
2	18	0.00018	0.015	17.3	1.8	1	20	437	456	437	459	0.94
3	18	3.8e-05	0.0031	19.4	0.8	1	23	465	487	465	487	0.98
4	18	0.00012	0.0095	17.9	4.4	1	21	493	513	493	515	0.95
5	18	6.6e-05	0.0053	18.7	4.6	1	23	521	543	521	543	0.99
6	18	6.3e-05	0.0051	18.7	5.3	1	23	549	571	549	571	0.97
7	18	1.9e-05	0.0015	20.4	7.2	1	23	577	599	577	599	0.97
8	18	2.5e-07	2e-05	26.3	2.7	1	23	605	627	605	627	0.98
9	18	0.00018	0.015	17.3	6.7	1	23	633	655	633	655	0.97
10	18	2.9e-05	0.0024	19.8	5.5	1	23	661	683	661	683	0.97
11	18	4e-06	0.00032	22.5	3.0	1	23	689	711	689	711	0.98
12	18	6e-05	0.0048	18.8	7.5	1	23	717	739	717	739	0.98
13	18	7e-05	0.0057	18.6	9.1	1	23	745	767	745	767	0.98
14	18	4.2e-05	0.0034	19.3	7.7	1	23	773	795	773	795	0.98
15	18	2.7e-05	0.0022	19.9	7.1	1	23	801	823	801	823	0.97
16	18	0.00041	0.033	16.2	0.2	1	23	829	851	829	851	0.97
17	18	0.064	5.2	9.3	5.1	1	23	861	883	861	883	0.98
18	18	1.7e-06	0.00014	23.6	0.9	1	23	889	911	889	911	0.96

Sequence Information

Coding Sequence: ATGAATTCTGAGGGACAGGACCCCCTTACTGGGGCCCACAGCAACAATTCCCATAACGAAGGCGCAACACAGAGGCCCCCACCTACAACATCAGTCCCAACAGACCTCAGAGTGAATACTACAGCTCTTAATGCAGTAACATTGAGTAGCGTTGCGAATAGTGTTGCAAAATATTGGGTGCTAACCAATTTCTTACCAGGGCCAATACCACAGGTTTCGGTGTACGGTATTCCTGGTTCTCGTACTGATAATGCAGGAAAATTAACGCAGGAAAACATGTTGGGGCAACATCCAGGTCTGCTTCCGGCCGACCCTTTGTTGATTCAACATTCGCAAATTCCCGTCAGTACATCACAGGGTGTAACGAATTTAACGATACCTACCAGCATGCATTTAGATGCTACCCAACAAAACCATGCCCATATGAATTCGAATCATCAATCTCAAAACGAATCTCAAAGTATGTCGACACAAAATCAGTCGCAACTAAATCATAATCAGATGAATACACATAATAGTCAGCAAAACATGGTTCAGGTCCAAGTACAAGATAATTTGGTGTCCGTAATTGAGGATAGCAAAGATCACAAGGAGTTAATAGCATCACAGCTAGCGCAGGCACATATACAATTATCGGAGAGCCAGTTGCAGCAACAAACGTTAACGGTGCAACAGTTGCAGCATTTGCAAGCTTTGGATAACGTCGTGCGCATGGAGACATCCATGGAAAACGGGCAGAATCCGTCTAATCAGAACGATAACGATGGGATGTCCGATTCGTTGCATATCGTCAAAGACGAGAAGGTTTTGCAGAATTGCAATAAACTATTAACGGGAGTGCAATTTGGCTTACAAGATTTAAAGGGAAATTTGATGGATGTGCGAACTGCTGATGGAAGTATCGTTAAAATATCGACGGGAATTCAAGACCAGGATTTAGCGAAAACTTTGGGCGCAGAAATGGTGCAGAGTATGTATAAAGTGAACGTAGACGATATTAATCAGCTATTGGCTTATCACGAGGTTTTCGGGAAGTTACAAGGCGATATTACCACTTCCGGACAATCAAATGTTGTCCAGAATTCGAATGTTACTCTCCAACAAACCGGGAATAATATCGTTAATAATATAGCGATAGTAACTCCGAAAACTCTAGTAGAAAATGACCAGGAGCCCAGCACGAGCACGATATCGACCGAGAGTCCTTCCGTGATTACCGGGAATCACGTTTGCGATCTGTGTGGCAAAATGTTCCAATTTCGTTACCAGCTAATCGTGCACAGGCGATACCACACAGAACGGAAGCCGTTCACGTGTCAGGTCTGTGGCAAGGCTTTTACAAATGCACAGGAATTGAGCAGGCACGGGAAATGCCACTTGGGTGGCAGCATGTTCACTTGTGCTGTTTGTTTTCATGTGTTTGCAAATGCTGCGTCATTAGAACGGCACATGAAACGGCATTCCACCGACAAGCCTTACAACTGCACGATTTGCGGGAAATCATTCGCGAGAAAGGAACATTTAGATAACCACACGAGATGCCACACTGGAGAGACTCCTTATCGGTGCCAATATTGCGCCAAAACGTTCACTAGAAAAGAACACATGGTCAACCACGTCAGGAAGCACACGGGAGAGACGCCCCATCGTTGCGAGATCTGCAAAAAGTCTTTCACGAGAAAAGAGCATTTCATGAACCACGTCATGTGGCATACCGGAGAAACTCCTCATCACTGCACCGTTTGCGGGAAGAAGTACACTCGGAAGGAGCATCTGGCTAATCACATGCGCTCTCACACAAACGACACCCCTTTTAGGTGTGAGATTTGTGGGAAATCTTTCACGAGGAAGGAGCATTTCACGAATCACATCATGTGGCACACAGGTGAAACGCCCCATAGATGCGATTTTTGCTCGAAAACCTTCACAAGAAAGGAGCATCTGCTAAACCACGTTCGACAGCACACCGGGGAATCCCCTCACCGTTGCGCTTACTGCTCCAAATCCTTCACCCGTAAAGAGCATTTGATAAATCACGTGCGTCAGCACACCGGAGAGACTCCGTTCCGATGCAACTTCTGCCCGAAAGCGTTCACCAGAAAAGACCATTTGGTGAATCACGTGCGGCAGCACACGGGGGAGTCCCCTCACAAGTGCATGTATTGCACGAAGTCTTTCACGAGAAAGGAGCACTTGACGAATCACGTGAGGCAGCACACCGGGGAGAGCCCTCACAGGTGCCATTTTTGCTCCAAATCGTTCACGAGGAAGGAGCATTTGACGAATCACGTGCGGATACATACCGGGGAATCCCCGCATAGGTGCGAATTTTGTCAGAAGACGTTCACGAGGAAGGAACATCTCACGAATCACTTGCGGCAACATACcgGTGAAACTCCTCATTGCTGCAACGTCTGCTCTAAGCCATTCACTCGAAAAGAGCACCTAATAAACCACATGCGTTCGCATACCGGAGAACGCCCCTTTGCATGTGGCGAATGTGGCAAATCGTTCCCACTGAAAGGCAACCTGTTATTTCACCAGCGTTCTCATAATAAAGGTGCTAACGCTGATCGACCTTTCCGTTGCGACCTCTGCGATAAAGATTTTATGTGTAAAGGACACTTGGTTTCTCACCGGCGATCGCATAGCGGAGAACGTCCGCACGCTTGCCCCGATTGCGGGAAGACCTTCGTCGAGAAGGGAAACATGTTGAGGCACTTGCGTAAACACGCTGCCGAGAACGGGCAGACGATTCCTAATCAAAATCAAGCTCAGCAGAGCGGTAATGTGACGCAGGTGACGGAGCCCAATATTCAGATACCGCAAGTGAGCCAGGCACAGAGCATGACGCCAGTTTCTACTGGGAGTATAGTGCCGCAATCGCCACATATGCCGTTACATCAGCAGACTAACCATCCGGTCGTCGTGCCCACTGCTAACGGCAACGTCCTGGCGTCTTACTGA
Protein Sequence: MNSEGQDPLTGAHSNNSHNEGATQRPPPTTSVPTDLRVNTTALNAVTLSSVANSVAKYWVLTNFLPGPIPQVSVYGIPGSRTDNAGKLTQENMLGQHPGLLPADPLLIQHSQIPVSTSQGVTNLTIPTSMHLDATQQNHAHMNSNHQSQNESQSMSTQNQSQLNHNQMNTHNSQQNMVQVQVQDNLVSVIEDSKDHKELIASQLAQAHIQLSESQLQQQTLTVQQLQHLQALDNVVRMETSMENGQNPSNQNDNDGMSDSLHIVKDEKVLQNCNKLLTGVQFGLQDLKGNLMDVRTADGSIVKISTGIQDQDLAKTLGAEMVQSMYKVNVDDINQLLAYHEVFGKLQGDITTSGQSNVVQNSNVTLQQTGNNIVNNIAIVTPKTLVENDQEPSTSTISTESPSVITGNHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELSRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLINHVRQHTGETPFRCNFCPKAFTRKDHLVNHVRQHTGESPHKCMYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACGECGKSFPLKGNLLFHQRSHNKGANADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHAAENGQTIPNQNQAQQSGNVTQVTEPNIQIPQVSQAQSMTPVSTGSIVPQSPHMPLHQQTNHPVVVPTANGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -