Xruf009902.2
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- znf711
- Assembly
- GCA_963966045.2
- Location
- OZ014493.1:43898448-43918775[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 39 0.028 2.3 10.4 2.5 3 20 58 75 57 78 0.94 2 39 0.017 1.4 11.1 0.8 1 23 83 105 83 105 0.97 3 39 8.5e-05 0.0068 18.3 3.4 1 23 109 131 109 131 0.98 4 39 3.7 3e+02 3.7 1.6 1 10 137 146 137 150 0.94 5 39 0.065 5.3 9.2 2.2 1 23 165 188 165 188 0.94 6 39 4e-05 0.0032 19.4 1.4 1 23 199 222 199 222 0.97 7 39 6.3e-06 0.0005 21.9 0.1 2 23 231 252 230 252 0.97 8 39 4.6e-06 0.00037 22.3 1.7 1 23 258 280 258 280 0.98 9 39 0.095 7.7 8.7 2.7 2 23 374 395 373 396 0.94 10 39 1.5 1.2e+02 5.0 0.5 1 23 417 439 417 439 0.92 11 39 0.00075 0.061 15.3 0.8 1 23 443 465 443 465 0.95 12 39 0.15 12 8.1 5.6 1 23 471 494 471 494 0.98 13 39 0.015 1.2 11.3 0.7 1 23 500 522 500 522 0.92 14 39 0.073 5.8 9.1 0.2 1 23 528 551 528 551 0.92 15 39 0.33 27 7.0 0.3 2 23 563 585 562 585 0.93 16 39 0.00014 0.011 17.7 0.5 3 23 597 617 595 617 0.96 17 39 1.3e-05 0.0011 20.9 1.5 1 23 623 645 623 645 0.98 18 39 5.5e-05 0.0044 18.9 0.9 1 23 651 673 651 673 0.98 19 39 0.17 14 7.9 2.2 2 23 723 745 722 745 0.91 20 39 0.004 0.33 13.0 0.4 1 23 766 788 766 788 0.98 21 39 3 2.4e+02 4.0 2.8 1 23 792 814 792 814 0.80 22 39 0.19 15 7.8 0.1 1 23 850 872 850 872 0.97 23 39 0.14 11 8.2 0.9 1 23 878 901 878 901 0.92 24 39 0.36 29 6.9 1.8 2 23 913 932 912 932 0.96 25 39 1.2e-05 0.00093 21.0 0.2 1 23 940 962 940 962 0.96 26 39 5.6e-05 0.0045 18.9 2.8 1 23 968 990 968 990 0.98 27 39 0.017 1.3 11.1 1.0 1 23 996 1018 996 1018 0.84 28 39 0.09 7.3 8.8 1.8 2 23 1048 1069 1047 1069 0.97 29 39 0.0018 0.15 14.1 1.7 2 23 1091 1112 1090 1112 0.96 30 39 0.17 14 7.9 0.3 1 23 1141 1164 1141 1164 0.93 31 39 0.078 6.3 9.0 1.0 2 23 1169 1190 1168 1190 0.94 32 39 2.4 1.9e+02 4.3 0.2 1 23 1196 1219 1196 1219 0.95 33 39 0.24 20 7.5 1.1 1 23 1225 1247 1225 1247 0.98 34 39 0.024 1.9 10.6 1.8 1 23 1253 1276 1253 1276 0.93 35 39 0.00037 0.03 16.3 0.5 1 23 1287 1310 1287 1310 0.93 36 39 0.00073 0.059 15.4 0.2 3 23 1323 1343 1322 1343 0.98 37 39 2e-05 0.0016 20.3 1.3 1 23 1349 1371 1349 1371 0.98 38 39 6e-06 0.00048 21.9 3.5 1 23 1377 1399 1377 1399 0.99 39 39 4.8 3.9e+02 3.4 1.3 1 21 1405 1425 1405 1426 0.84
Sequence Information
- Coding Sequence
- ATGTTCGAAGAGCTTATTCCGTCGTTAACGACGGTGAAAACTGAGGAGCACTCTTATTCAAGTGGAAAATCTATCAACAAGAAACAGCCTGATAGGTTGTGCTCCACTTGTGGCGAATTTGTCCGCAATAAACGATTTGAGAGGCATTGCAATTCACATCCGAAAATTCTGTGCACTTCTTGCGACGAAACGTTTAAAACAGAAGAGGATTTGAACAAACATAGAGAGTGTCATGAAGAAAACCCTCATCCATGCGCCAATTGCAATTTGAGTTTCAAAACTTTGATAGAATTGGGGGTACACACTAAGAAACACGAATTGTGTTTTAGGTGCCCAAAATGTAAATACACAACTAAGAGTAAGTCGACGTTGAGAATGCACATTAATAGACACGAAAATAACTATAAATATCGTTGCGAGATTTGTAATAAGGGCTTTATGTGCTCGTCGGTGCATATGGAGCATGTGGAAGGGCACACCGGTATAAAACGATTCATGTGCGATATTTGCGGTAAAAAGTTTTTGTTTAAGCGTTACCTTTACGTTCATAAAAAGTTGAATCACGCGCAAACTGTTGATGGAACGGAAGAACTGTACCAGTGCGAAGTTTGTCAAAGAAAATTCAAGTTTCAGAAGAGCTTAGAAAGGCATCTGAGCGTGATACATGATATTGGTATTAGACGCACAGTGAGTTGCCCCGTTTGCAATAAAGTTATTGCGAATccttataatttaaaaatgcatATGAGGACCCATACAGGAGAGAAACCTTTTGTTTGTGAAACTTGCGGAAAATCTTTCTCGAAGACGGTGTATTTGAAAAAACATATTAATAAGCATTCGCGGGAGAAGGGGAGGAATGCCGATAGAATAAACCCAAATCTTTATGTTAAAACTGAATTGCTCGACGAAGATGAAGACAGCAGTGAATTTGAAGAGatccaaaaaaaaattaaacctaaaagaaaaataaagaaagaGGATTCGGACGAAGAGTATATCCCGAACAAAAGATCGCCGGCGCAGAAACGCAAACGTGCCAGCACCAGCGATATAGAAATAAAAAAGGAAGTCGAGAGCAATGGCAATAAGTCGACGAGAAGCAGCAGTAGAACTTGGAATTGCAAGAAGTGTCCCCTGAATTTCGATAAAGTTAAATTGCTGCGGGAACACAGGAAGTCGCACCATACTGTGGAGGATGACAATTCGTCGAAGTACAGTTATAAGTATGATGAAGAGCAGGACATTTACAATTGCATCACATGCGACGCGGAATGCGGCACCAAGGAGGAAATGGAGAAGCATCTCGAGACACACGAAGAAAGGTTTGTTTGCGAACTTTGTAATAAAACATTCAACAAGGCGTACAATTACGCGACTCACGTTTACGAGCACAGCGAAGACAAATTATTCCGTTGTCCGCTGTGCCAGTACTCGACGCATAGGCGGACGTGTCTCTTAACTCACATAAACCGAATGCACTTGCAAAAGTTTCCCTATAAGTGCGAACAGTGCGGGAAAGGCTTCACCGATGTTGTATTACACAAAGAACACATAAACGAGCATTTAGGTCTGAAGCCTTTCGTCTGCATCGTGTGCGACAAGGGCTTCCCGTTCTCCAGATATCTTCTCGCCCACCAAGTGAGAAACCATCGTGTCGGCATCGAGGGCAAAGTCATGCCGAATCAATGCCCCGTCTGCTTTAGAGTCTTCGCCAAGGTGCCCACAATGGAGAAGCACTTTGTCACTCGCCACGAGCGCACAGGGCCCCACGAGAAGCGCCACCTCTGCGACATCTGCGGAAAAGGTTTCGCGGCGAAAGATAAACTAAAAGTGCACTACAGAGTGCACACGGGTGTCAAACCCTACTCATGTTCCTACTGCGAGAAAAGCTTCACGAAAAAAGATTATTTGATCATGCACGAGAGGGTGCACAGTGGGGAGAAACCGTACTCTTGCGAGTACTGCGGCAAATGCTTCAACCAGGGCGCTCCTCTGAGGATCCACGTGAGAAGTCACACTGGAGAGAGGCCGTATGTTTGCCATATTTGCCAGACGGGATTAAAAGTTGAATTAGAGACAGACGACGAAAAAGTCTCTTTGGAAACGGTTAAAGTCGAACCAGGCCCAAGTCGGGACATAGACCCAAGAGCTCAGCTTAAATGGTATTGCAAAAAATGCAATCTAAATTTTGCGACAAGAAGATTGTTCTACAAACATAACAAAGCTACTCACAGGGTACACAAAGATGAAGAAATGAAATACAACTACAAGTACGATAAGAGCCAAGGATTGTTCACTTGTAATACTTGCGATGTCGGTTTTAAAGATGAAAAGGAAGCCTTGAAACACGTTAAAACTCACGAAGATAACTTTAAATGCGATCATTGTGGGGAGATATTCTTAGAAGCTTATGATTTCAGTTGCCACATGCAGGGACATAGTTCGGATGGTCTGTTCCACTGTCCCATGTGCGCTGATTTTTTTACAGATCGTCGATCTGCACTATTAGTCCACATAAACTTGACGCACTTTAATAAATACAGATACAGTTGTGCGAAGTGCGCAAAGCCTTTCAATGACCCTTTAAAATACTTGGAGCATGAAAACGTGCATTTAGGCTTAAAACCGTTCGTTTGCATAGTCTGCGAAAGAGGTTTCACTTATTCGCGTTATTTATTTACGCACCAAGTGAGGAATCATAAAGTGAGTTCCAACGGAGATACTGGAGGCAAAGAATGCCCGGTTTGCCATAAAACGTATTTGAAGAATCTGGATCAACATATGGAAAGTCATAGAGGAGAGTTCGAAAAGAAATACTTGTGCGACGTTTGCGGAAAAGCTTTTGCTCGCAACGAGAAACTGACGTTGCATTATCGGGTCCATACGGGGTACAAACCCCATCGTTGTTCTTACTGTGAGAAGAGTTTTACGAAGAAAGATTACTTGGTGATACACGAGAGAATTCATAATGGCGTAAAACCGTATTCTTGCGAGTATTGCGGGAAGAGTTTCAACCAGGGGGCGCCACATAGGATTCACGTGAGGAGCCATACAGGGGAAAGACCGATAGTCACCATTAAAACGGAAATAGATGAAGATTTTCAGGAACAATCGTCGAGTACCCAGACAGATGTTAATAAATGTCAAACGTGTAATGCcacatttaaatcaaaattagcCCGCATTAAACACTATAAAATACATCCGAATCCGGGTAATGATGAATTGTACTCGCCGGAAACCAGCAAAGAACCAAAAGACAAGTGGAAATGCAGAAAATGCAACGAAATTTTTAGAACGAAAAGATTGTTGGCGAATCATAGGAAGGATCATAGGAGCCTCGAGGAAGTCAAAGAATACGAAATTCTAGGATATCCAGGACAGTACAATTACAAATTCGACAAGAAGGAGAAGAAATACGTTTGCGATACTTGCAGCGCCACTTACGATTCGCAAGACTCAATCAATCAGCATACAGAAGAGAAACACGAGCGCGCTTTGACTTGCAGCCAATGTGGAAAAATCTATCAGAAGATTTACCACTATGCGATACATATGTACGATCATAGCGATGATAAAATCTTTCGTTGCCCGGTTTGCGAGTTCGATACTCAAGCTAGGGCTTTGCTGTCGTACCACATCAACAGAACGCACTTACAgaagtttaaatacaagtgcGACCAATGCGTTCGTGGATTCTTCGACATAACTTTCTTCCAGGAACATCAAAACGAACATCTAGGTGTAAAACCTTTCGTTTGCATCGTCTGCAGAAAGGCTTTCTCGTATTCAAAGTATCTCTTTCAACATCAGTCGAGGAATCATAGAGTTGAAATAGAAACGGACGTCGGTCCTTTCCCGTGCACGATTTGCTCCAAAGTTTTCCCGAAACAAATTAGTTTGCAGAAGCATTTCACTGTTTTACACGATAATACGCGTGGACCGCGAGAAAAGAAACGCTTGTGCGATATTTGCGGAAAAGGTTTCGCTGAAACTGATAAATTGCGGATGCACTATCGTATTCACACGGGAATTAAACCGTACAGCTGCTCTTATTGCGAGAAGAGTTTCTCGAAAAGAGATTATTTGATAATGCACGAACGAATACATACTGGGGAAAAACCGTATGAGTGTGAACATTGCGGGAAATGTTTCAATCAGACTGCTTCTCTGAGGATCCACGTGAGAAGTCACACTGGGGAGAGGCCCTACGTTTGCCATCTTTGTCAAACGGGGTTCACTTGCAAGGGTGCGATGGATCTTCACTTGAAGACCTGCTCTGGATGCTCTTATTAG
- Protein Sequence
- MFEELIPSLTTVKTEEHSYSSGKSINKKQPDRLCSTCGEFVRNKRFERHCNSHPKILCTSCDETFKTEEDLNKHRECHEENPHPCANCNLSFKTLIELGVHTKKHELCFRCPKCKYTTKSKSTLRMHINRHENNYKYRCEICNKGFMCSSVHMEHVEGHTGIKRFMCDICGKKFLFKRYLYVHKKLNHAQTVDGTEELYQCEVCQRKFKFQKSLERHLSVIHDIGIRRTVSCPVCNKVIANPYNLKMHMRTHTGEKPFVCETCGKSFSKTVYLKKHINKHSREKGRNADRINPNLYVKTELLDEDEDSSEFEEIQKKIKPKRKIKKEDSDEEYIPNKRSPAQKRKRASTSDIEIKKEVESNGNKSTRSSSRTWNCKKCPLNFDKVKLLREHRKSHHTVEDDNSSKYSYKYDEEQDIYNCITCDAECGTKEEMEKHLETHEERFVCELCNKTFNKAYNYATHVYEHSEDKLFRCPLCQYSTHRRTCLLTHINRMHLQKFPYKCEQCGKGFTDVVLHKEHINEHLGLKPFVCIVCDKGFPFSRYLLAHQVRNHRVGIEGKVMPNQCPVCFRVFAKVPTMEKHFVTRHERTGPHEKRHLCDICGKGFAAKDKLKVHYRVHTGVKPYSCSYCEKSFTKKDYLIMHERVHSGEKPYSCEYCGKCFNQGAPLRIHVRSHTGERPYVCHICQTGLKVELETDDEKVSLETVKVEPGPSRDIDPRAQLKWYCKKCNLNFATRRLFYKHNKATHRVHKDEEMKYNYKYDKSQGLFTCNTCDVGFKDEKEALKHVKTHEDNFKCDHCGEIFLEAYDFSCHMQGHSSDGLFHCPMCADFFTDRRSALLVHINLTHFNKYRYSCAKCAKPFNDPLKYLEHENVHLGLKPFVCIVCERGFTYSRYLFTHQVRNHKVSSNGDTGGKECPVCHKTYLKNLDQHMESHRGEFEKKYLCDVCGKAFARNEKLTLHYRVHTGYKPHRCSYCEKSFTKKDYLVIHERIHNGVKPYSCEYCGKSFNQGAPHRIHVRSHTGERPIVTIKTEIDEDFQEQSSSTQTDVNKCQTCNATFKSKLARIKHYKIHPNPGNDELYSPETSKEPKDKWKCRKCNEIFRTKRLLANHRKDHRSLEEVKEYEILGYPGQYNYKFDKKEKKYVCDTCSATYDSQDSINQHTEEKHERALTCSQCGKIYQKIYHYAIHMYDHSDDKIFRCPVCEFDTQARALLSYHINRTHLQKFKYKCDQCVRGFFDITFFQEHQNEHLGVKPFVCIVCRKAFSYSKYLFQHQSRNHRVEIETDVGPFPCTICSKVFPKQISLQKHFTVLHDNTRGPREKKRLCDICGKGFAETDKLRMHYRIHTGIKPYSCSYCEKSFSKRDYLIMHERIHTGEKPYECEHCGKCFNQTASLRIHVRSHTGERPYVCHLCQTGFTCKGAMDLHLKTCSGCSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -