Xruf026629.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014497.1:23428091-23429611[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.097 57 5.4 2.7 13 36 9 29 2 35 0.75 2 14 0.0032 1.9 10.1 1.0 17 41 41 62 30 64 0.82 3 14 0.022 13 7.5 1.8 15 41 67 90 59 98 0.81 4 14 0.0038 2.3 9.9 1.4 18 39 98 116 90 126 0.84 5 14 0.0085 5 8.8 1.5 19 41 127 146 122 154 0.80 6 14 0.071 42 5.8 0.4 18 41 154 174 148 176 0.85 7 14 0.045 26 6.5 5.3 10 38 175 203 166 207 0.77 8 14 0.34 2e+02 3.6 0.6 18 41 210 230 204 232 0.83 9 14 1 6.1e+02 2.1 0.7 15 40 235 257 226 266 0.74 10 14 1.8 1e+03 1.4 0.6 19 40 267 285 262 288 0.73 11 14 1 6.1e+02 2.1 1.1 17 29 293 305 274 313 0.79 12 14 0.026 15 7.2 1.7 9 40 314 341 308 347 0.81 13 14 0.0025 1.5 10.5 5.0 1 44 334 373 334 373 0.88 14 14 0.093 55 5.5 5.4 2 41 363 403 363 404 0.89
Sequence Information
- Coding Sequence
- ATGGAGCATAAGTTGACGCACTCTAAGGAAAGATCCCACCAAtgtaaaatttgtcaaaaagtGTTTGCCAAGCAGCACTCGTTAAACAGACACATTTTGACTCATacaggagaaaagcctcacaaatgtgaaatttgcgaGAAAGCATTCTCTCAAAGTTCTACTTTAACGGAACATGTTAGAACTCACACAGGAgagaagcctcacaaatgtgaaatttgccagaaagcattctctaaGCGCTCTACTTTCATGGATCATATTAAGTCTCACTCTGGagaaaggcctcacaaatgtgaaatttgtcagaAAGTATTCTCTAAATATTCTAATTTAAAGAGGCATGTTATGAGTCACACAGGAGAAAGGCCCCACAGCTGTAAGATTTGCAAGAAAGCGTTTTCCATTCGTTCCAGTTTGGTGAATcaccttaggactcatacaggagagaggccccacaaatgtcgaatttgccagaaagcattctttGATGGTTCTGCTTTGACAAAACATATTAGaactcacacaggagaaaagcctcacaaatgtggaatttgccagaaagcattcgcTAGGCATTCTCATTTAACAGTACATCTTAGGACTCACACGGGAGAAAAGCCTTACAATTGTGAGATTTGCAAGAAAGGATTCTCCGTGCATACCAGTTTAGTGGCTCAcattaggactcatacaggagaaaagcctcacaaatgtgaaatttgccagagagCATTTGCAGATCGTTCTAATTTTGTGATTCACGTTAGGACTCATCTAGGAGAAAGGCCTCACAATTGTGGAATTTGCCAGAAAACATTCGGCAAGCTTTCTCTTTTAACTGCGCACATTCGTACTCATACGGGAGAagggcctcacaaatgtgaagtgTGCCGGAAAACATTCACCAAGGGATACTTGTTAAATAGACACATTAAGATTCATACTGGTGAAAAGAACTTCAAGTGTGCAGTGTGTGGCAAAGGTTTTAATTTAAAAAGCAATGTTACAAGACACATGAGGATCCACACAGGCAGTAAACCTCATACTTGCAATATTTGCGAGAGAGCATTCTCGCAATTAGGAAATTTAAAGCATCATATTAAACAGGTGCACAACAAAGAAACTccgcacaaatgtgaaatttgcgaAAAAGCGTTCTTCCAGCGCTTCACTTTAACAAAGCACATTAGGATACATATGAGACAAAGACTTTACAAGTGCGATGTAAATGGGGAAGTCCTCGCAGCAAAGGTCAAGGAATCACAAGATGAGCAGTCCAACGAAAGTAGTGTTAGTGTGAAATTGGAAGAGAATATGAcgtatgaagaagaaaatgtcATTGTAGAAtctgaatattttgaaaagccTATTGAGGATGAAGAGTACGAGGCGAAAAATCAAAACAGAGTTATTGTGAAAGAAGAAAGGGATATTTTAGACCAAGAGGATAATggtgaaaattttgtaaaacttTTCAAAAACGAGGACTATGAGGTGAAAGATGAAAATAGTTTGTGA
- Protein Sequence
- MEHKLTHSKERSHQCKICQKVFAKQHSLNRHILTHTGEKPHKCEICEKAFSQSSTLTEHVRTHTGEKPHKCEICQKAFSKRSTFMDHIKSHSGERPHKCEICQKVFSKYSNLKRHVMSHTGERPHSCKICKKAFSIRSSLVNHLRTHTGERPHKCRICQKAFFDGSALTKHIRTHTGEKPHKCGICQKAFARHSHLTVHLRTHTGEKPYNCEICKKGFSVHTSLVAHIRTHTGEKPHKCEICQRAFADRSNFVIHVRTHLGERPHNCGICQKTFGKLSLLTAHIRTHTGEGPHKCEVCRKTFTKGYLLNRHIKIHTGEKNFKCAVCGKGFNLKSNVTRHMRIHTGSKPHTCNICERAFSQLGNLKHHIKQVHNKETPHKCEICEKAFFQRFTLTKHIRIHMRQRLYKCDVNGEVLAAKVKESQDEQSNESSVSVKLEENMTYEEENVIVESEYFEKPIEDEEYEAKNQNRVIVKEERDILDQEDNGENFVKLFKNEDYEVKDENSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01536849;
- 90% Identity
- iTF_01536849;
- 80% Identity
- iTF_01536849;