Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_963966045.2
Location
OZ014495.1:9427595-9438214[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-10 3.5e-07 31.8 0.0 2 46 61 105 60 105 0.97

Sequence Information

Coding Sequence
ATGTACTTGGATTTCGCGTGCTGCGCTGCAGTCCCTGGCGGAGGACGAAACGAGGAATATGCCATCCATCTCCTCAACATGTGCGGCGGCAACATCCACGAGGCGATGCTGAAGCTTATGCAGCCGACTCCCTCACTTCCTTCAGACCATCCACTGCTCTGCTATCAGTACGGCGACAGTGAGAAGTGGTCATCTGGTGAAATCGACAAGTTTCACCAAGCTTTGCTCAAGCACGATAAAGATTTCTTTATAATTGCTCAGGAGGTTGGCTCTAAGAGTGTGAAACAGTGTGTGCAGTTCTTTTACATGTGGAAGAAAGTTTGCACGGACGATTACCGTAGGTTTAAGCAAACGAGAGAGCGAAGGCACTATTCTAGGAAATGTACGGACGTGGACTCTGAAGAGAAACCTTTCGCAGATGCCAAACTTTTAGGAATAATAGATACTGGATCGCCAATGCCAATACAGGAACACAGAAATTTCAGTTGCGAATTTTCCGACTGTTCCGCTAGTTTTAATTCCCGTGCTGCGTTAAACGGACACATACGAATTCACGGAGGGAACACGAGATGTTCGCCCACGCCTTCCTTGGTTGCCGAGAAGAGGTTGTCGTCAGTGTCCTCGTCGACGGTGTGCCATACAGAGTCAACTGAAGACTATCCTTGTAAGATATGCGGGAAAGTTTTCACGAAGATTAAAAGCCGGAGCGCCCACATGAAATCGCATCGGCCGCCGGATGCTGAGACGTCGAAAAAGAAGGACAAGGAGCCCGTTTCATCCAGCACGTTAGACATCAGAGTCCAAAGTCCTTACAGTACTTAG
Protein Sequence
MYLDFACCAAVPGGGRNEEYAIHLLNMCGGNIHEAMLKLMQPTPSLPSDHPLLCYQYGDSEKWSSGEIDKFHQALLKHDKDFFIIAQEVGSKSVKQCVQFFYMWKKVCTDDYRRFKQTRERRHYSRKCTDVDSEEKPFADAKLLGIIDTGSPMPIQEHRNFSCEFSDCSASFNSRAALNGHIRIHGGNTRCSPTPSLVAEKRLSSVSSSTVCHTESTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAETSKKKDKEPVSSSTLDIRVQSPYST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01537349;
90% Identity
iTF_01537349;
80% Identity
iTF_01537349;