Xruf031003.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014498.1:15972976-15973737[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-07 2.9e-05 25.2 0.0 2 40 17 55 16 59 0.94
Sequence Information
- Coding Sequence
- ATGGTGAGAAACTACGTACGCAAAACGCTTAGAGCGGAATCTTATTCTAAAGACGATTTAACCAATGCTATTCGCAGAATTCGTGCAGGAGAACTAACTCTATACCGTGCCGTCCAGGTGTATAGAATACCAAAAACAACACTGTTTAATCGATTGAAAGGAAACAGAGGACAAAAAAGTTCAACACTAGAAAGAAACAGGGCTATTCCCCCTGATCGAGAAGCAGAACTAGCAGCTAATCTAAGAACAATGGAAAAGTGGGGATTTGGTATGACTCGAAAAGAGGTTTTACAAGTGGTCTCTGAATTCGTAAAAGCCACAAACTTGCAAACCCCATTTAAAGATCACTGTCCGGGTGAGGACTGGTttctacaatttaaaaaaagacATAGATTATCCTTGAAAAAGCCCCAATCGGTGGAAATAGCTAGAAAAACTGCATCAGATCCTTTTTCAATCAATGAATACTTTGATATCCTCGAGGCAACCATAAGGGATAATGATCTACAAGACAAACCAAACCAGATTTTTAATCTGGACGAAACTTACTTTTGCCTAGACCCATCGAAGTTGAAAGTCCTGGGTGCAATAAATTGCCCATCAACTCGAACTACCAGCGGATCCGGAAAAGAGAACATTACGGTTTTGATTGCAGCCAGTGCTAGTGGTCAGAAGCTTCCCCCGATGATCGTTTTTAAAGGCAAGTACTTATGGGATACCTGGATGGCACCTGAAGATCAATGCTTTCCACACTTAGCATAA
- Protein Sequence
- MVRNYVRKTLRAESYSKDDLTNAIRRIRAGELTLYRAVQVYRIPKTTLFNRLKGNRGQKSSTLERNRAIPPDREAELAANLRTMEKWGFGMTRKEVLQVVSEFVKATNLQTPFKDHCPGEDWFLQFKKRHRLSLKKPQSVEIARKTASDPFSINEYFDILEATIRDNDLQDKPNQIFNLDETYFCLDPSKLKVLGAINCPSTRTTSGSGKENITVLIAASASGQKLPPMIVFKGKYLWDTWMAPEDQCFPHLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01536006;
- 90% Identity
- iTF_01536006;
- 80% Identity
- -