Xruf014819.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014495.1:270339-270871[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-07 2.1e-05 25.7 0.0 2 36 19 52 18 57 0.92
Sequence Information
- Coding Sequence
- ATGCCtcgaaaatacaaaaaacaattaGGGGGCAGAATTTACAAGAACTATTCCGACGAAACGttgcaaaatgcattaagaGATGTCGAAAATGGAATGTCCTTGGGGGTGGCAAGTCATACATATGGAATTACCAAGTCGACTCTATCGAGAAAAATGAGAAATTTGTTCTCACTAACCCCTGGGAGACAGCCTGTCTTTTCCAAGGAAGAGgaggaaatatttgttaataatattCTTTTGGCTGCACAGTGGGGATTTCCTTTAACTTCCTACGACATCAGGTTAATAGTGAAAGAATACGTAAATCGCAAAGGCATTCGGGAAAAGCGATTTGGACGGAATAACAATATGCCTGGCGTGGATTGGGCGAGGCACTTTTTAAACAGGCATAAATCCAAGCTCTCTGCAAGATTATGTGAAAATATAAAGCGAGCAAGAGCTCAAGTGTCTAGCGACATTATTACCTAA
- Protein Sequence
- MPRKYKKQLGGRIYKNYSDETLQNALRDVENGMSLGVASHTYGITKSTLSRKMRNLFSLTPGRQPVFSKEEEEIFVNNILLAAQWGFPLTSYDIRLIVKEYVNRKGIREKRFGRNNNMPGVDWARHFLNRHKSKLSARLCENIKRARAQVSSDIIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01536047; iTF_01284347; iTF_01536072; iTF_01284246;
- 90% Identity
- iTF_01536047; iTF_01284347; iTF_01536072;
- 80% Identity
- -