Xruf005596.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- clz9_22
- Assembly
- GCA_963966045.2
- Location
- OZ014493.1:801245-808793[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 1.5e+02 3.8 0.0 4 15 32 43 31 45 0.88 2 2 7.2e-06 0.001 20.3 0.0 4 37 303 336 303 342 0.90
Sequence Information
- Coding Sequence
- ATGgaaaaaatttacaaaactcTGCGGTGGCTGGCACAAGTTCAGAAGAACAACAAAACTGTTTCCTTGGCGGTGTTTGAGGCGAAAATCGCCGATCTAAAAGAAGCGGTTGATGCCGTCGTCAACGGCCTCGGCGGAGTTCCTGATAgaaAATCGGAACATCAGGATTCAGACAACGACAATGTTAATGTTGATGCATCGGTCGTGCCTGTGTCACCTGCAGCCTGCGAGCCCATGAAGTTGGACATCAGGAAGAGAATTAAGGCGATGCTGCAAGAGTCCAGTCCTGAGAAGCCGTGCGGTTCCGGACTGTCATCTGTAACACCTACCAAGGCGGGCATCCTGTATGGGGAGGACTTCGAAGGCGAACTGCACGGTTCTATTTCTGGATTAACGAATTCTGACATTGACCCTGAGTACTGTCCTTCGTCTCAAAGTAGTTCTTCCTTGACGTTTGATTCGAGAAATGATGGGTCGTTCCATTCCGATAAGGAGAAAGAGTTGTTTTTTTCATCCGATGAGGAGGAAGCGGTGTTTCGTTCATCCGATAAAGAGGAAGCGGTGTGTTGTTCATCCGATAAAGAGGAAGCGGTGTGTTGTTCATCCGATAAGGAGGAAGCGCTGCGTTGTTCATCCGATAAGGAGGGAGCGGTGTTTTGTTCATCCGATAAGGATGGAGCGGTGCTTTGTTCATCCGATCAGGATGAGGCGTCTTCTTCGGCTTCATATTTAATGAATGCCTCTTCATCTGAACGGTGGAGTGTAAAGCGGATACTTTTCCCTGCTTCAGAAAATGGCTCCCATAATAGTGACAGCAGAATGCAAACCAGTTCATCAACTTTAACCGGAGGTAGTATTAAAATGCCTAAAATATCTCAGGGAAAATATCGTCAGTACGAAATCCCTGAATTGCTTGAAGCCGCAAGACTTGTAAGAGAGGAGAAAATGTCCATCTACAGGGCAAGTAAACAAAGCGGTATTCCCTGGAGCACACTAAAagattatttaacgaaaaatgAAGATGATAATCGTCAAATTGCCAAATTGGGAAGGCCGTTTGCTCTTACAGCAAACCTCGAGACGCAATTATTTACCTACATTATAAAAATGCAAGAACTCGGTTTTGGATTAACAGTGCAGATGATAAGAAAAATAGCTCATGAACTTGCAAAACATGCTGGAAGAGATAATTTCTTCAATAAAGAAAACGATTCCGCTAGTAAATGGTGGTGGACTCAATACAAAAAACGGTTTAATTTAACCCTTCGTATCCCTGAAAACCTGGCTGCTTATAGAGCTTCACTGTCAAATCCTGAAATAATGGAAGACTTTTATACAAAATTGGAAGCATTAATGGTTAGGCTTGGAGTTCAAGATAATCCAGATCGTTTAGTAGTGACCTCGCTTGGAAAGCGTTACGTCTACAAAAAAACATATGCCGATAGAGGGGAGTCTCATACCATGATGGGATGTATTTGCACCAATGGAACATGGATTCCAcctttaataattttcaaaggtgTCCGTTGGAATGACAGTTTGAAGCATGACTGCCTGCCAAATGCTCAAGTAAAACTTTCTCCAAAAGGATGGATCAACAGTGACATCTTTATGGACTGGTTTCGGTTCTTCATTGCAACAATTCCACCTGCTCGACCGGTAATTTTATTAATGGATTCCCATGCGCCACACATCAATCCGGAAGTAATATCGCTTGCATCAGAAAATGATGTTTACTTATTTACATTTCCGGCCCACACTAGCCATTTGTTACAGCCCCTGGATGTGGGCGTTTATAAATCATTAAAAGCTCACTGGTCGAAAAGCTTAAATGCTTATATGAAGGAAAATGCTGAGAAGCCTAATAGAACCAACTTTCATACCCTACTGAATCCAGCGTTTCTCTCTAGTTTTTCCTCATCAAACATTATAAATGCCTTTAGAAAGTCTGGGATATGCCCTTTCGATAGGAATGCCATTCCTAAGGAAGCTCTTGCGCCATCTCTACTAACTTCTAATGCGATAGCCAATGATGGTGTAGCAGTTGCTACTCAACAAAACTCTGAAATTAGCAACATATTGACTCTGCCGACGAAGCCTTCTACTGCAAATCCGAATCGAAAGAAACGCGATTCAAGAGCGAAGTGCCTCAATTTTCAAACTAATGTGCCTTCTTCATCAATCGACGAAGCATCCACGTCATCATGTGTTCCACCATCACCGATCCCGATGGTTTCTTCGAAACCGCCAGTCGCAGCTAAACGAAAATCTAAGAAAGCGGTTTCTAAAGGTGATGCCTGGGACTGTGGAATGTGTGGTAGCAGTTATTCTCTAGATGTCAAAAAAAATGGTGCCTTGTGGGTCCAATGTTCCTACTGCCTGGTTCCATACCACGTTAAGTGCCAGTCTTCTGATGCCAAGGAGGATGTTTTCATGTGCGATATGTGCGGGAACAATGAAGACACTGAGGATGATTCTGACGAAGACTGA
- Protein Sequence
- MEKIYKTLRWLAQVQKNNKTVSLAVFEAKIADLKEAVDAVVNGLGGVPDRKSEHQDSDNDNVNVDASVVPVSPAACEPMKLDIRKRIKAMLQESSPEKPCGSGLSSVTPTKAGILYGEDFEGELHGSISGLTNSDIDPEYCPSSQSSSSLTFDSRNDGSFHSDKEKELFFSSDEEEAVFRSSDKEEAVCCSSDKEEAVCCSSDKEEALRCSSDKEGAVFCSSDKDGAVLCSSDQDEASSSASYLMNASSSERWSVKRILFPASENGSHNSDSRMQTSSSTLTGGSIKMPKISQGKYRQYEIPELLEAARLVREEKMSIYRASKQSGIPWSTLKDYLTKNEDDNRQIAKLGRPFALTANLETQLFTYIIKMQELGFGLTVQMIRKIAHELAKHAGRDNFFNKENDSASKWWWTQYKKRFNLTLRIPENLAAYRASLSNPEIMEDFYTKLEALMVRLGVQDNPDRLVVTSLGKRYVYKKTYADRGESHTMMGCICTNGTWIPPLIIFKGVRWNDSLKHDCLPNAQVKLSPKGWINSDIFMDWFRFFIATIPPARPVILLMDSHAPHINPEVISLASENDVYLFTFPAHTSHLLQPLDVGVYKSLKAHWSKSLNAYMKENAEKPNRTNFHTLLNPAFLSSFSSSNIINAFRKSGICPFDRNAIPKEALAPSLLTSNAIANDGVAVATQQNSEISNILTLPTKPSTANPNRKKRDSRAKCLNFQTNVPSSSIDEASTSSCVPPSPIPMVSSKPPVAAKRKSKKAVSKGDAWDCGMCGSSYSLDVKKNGALWVQCSYCLVPYHVKCQSSDAKEDVFMCDMCGNNEDTEDDSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -