Xruf023968.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014497.1:10096975-10097901[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-09 6.1e-07 30.6 0.1 7 36 28 57 24 65 0.86
Sequence Information
- Coding Sequence
- ATGGCGaagacaaagaaaacaaaaatgaatggAACGAAGAAAACAAGGACTTTCTTTCTATATGAAGCGGCTCAAGTAAAAAATGCCTTAGAGGCTATCCGAAATGGCATGCCGACGGCTAGAGCGAGCAAAATCTTCAGCGTTCCCAGGACAACTTTACGTAATAAAATAGCCGGCCGCGCACCAGAGTCCAGTGGGAAAACAGGCCCGAGTTGTGTCCTCGGGAATGagattgaaaatgaactgtGTGAATGGATGCTGAATTCGGCAAGGATGGGATTCCCGGTAACGAAGGAGGGATTGGTGTACTCTGTAAGACGAATAATAAAGGAAACAGGAAGAACTACTCCTTTCAAAAACCAAACACCTGGTAAAAAATGGTTCAGAGCGTATATGAACAGGCatcccaacatatctttgaagCGAGCGGAGTATTTAGGCAAAGCTAGAGCCAACATTACGCCTGAAAAGATCCGAAATTGGTTCCAAGAAACTTTGAACTTGCTAGGCGACAATACCTTTGTACTAGAACATCCCGATCGAATGTTTAACATGGACGAAACGGCATTCTTTTTGAATCCTAAAGGTGCCTGTGTGTTGGCAGAAAAAGGAAAACACTTTTATAACGTATCTGCAAACAGTGATAAGGAGAACATAACCACTTTAATGACAGTAAACGCTCTTGGGGAATTCGCACCATCATTGACAATATACAAATTTGAAAGGCTTCCTGCCCAGTACATCAAGTCTGCGCCACCAATGTGGGGCTTGGGAAAATCCAAAAACGGTTGGATGACAGCCGCTTCATTCTACGAGTATTTTACAAATGTGTTCCATCCTTTTCTTGTTAGAAAAGGGGTTGATTTTCCGGTCATTGTATTTCTTGATGGCCATTCCTCTCACTTGAGTATCCAGCCGTTTTTGTAG
- Protein Sequence
- MAKTKKTKMNGTKKTRTFFLYEAAQVKNALEAIRNGMPTARASKIFSVPRTTLRNKIAGRAPESSGKTGPSCVLGNEIENELCEWMLNSARMGFPVTKEGLVYSVRRIIKETGRTTPFKNQTPGKKWFRAYMNRHPNISLKRAEYLGKARANITPEKIRNWFQETLNLLGDNTFVLEHPDRMFNMDETAFFLNPKGACVLAEKGKHFYNVSANSDKENITTLMTVNALGEFAPSLTIYKFERLPAQYIKSAPPMWGLGKSKNGWMTAASFYEYFTNVFHPFLVRKGVDFPVIVFLDGHSSHLSIQPFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01535883; iTF_01535890; iTF_01535985;
- 90% Identity
- iTF_01535883; iTF_01535985; iTF_01535890;
- 80% Identity
- -