Xruf029491.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014498.1:8010567-8010968[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-09 9.8e-07 29.9 0.0 5 41 21 56 17 59 0.86 2 2 7.9 1.1e+03 0.9 0.4 30 44 109 123 109 124 0.83
Sequence Information
- Coding Sequence
- ATGGCAAGTCTTAAAAAGCGTCCAATACACCAATACCCCGAAGCTTCTTTACCAGCTTCTTTACCAGCTACTTTAACTGCGATACGGGCAGGCATGGCATTAAGAGAAGCTAGTAGGATATATAATATCCCCAGAACGACAATTCAAGACCGTTTACATGGCCGCATCAAGGAGAGTGCTAGAAACATGGGGTCACCAACTATTTTAAGTGTTGACGAGGAACTGGAATTAGTTAGGTGGTTGAAAGAGTTAGCTAGGACGGGATTTCCTCAAAAAATACGAGTTACTCAATACCGTTCAGAAAATTGTTCTTGCGGATCAATGAAAAACACCATTCATAGAAGGAAAACCAGGAGAAAAATGGTAAGCAAAGTTTTTAGAAACATCCTGATTTATCGCTGA
- Protein Sequence
- MASLKKRPIHQYPEASLPASLPATLTAIRAGMALREASRIYNIPRTTIQDRLHGRIKESARNMGSPTILSVDEELELVRWLKELARTGFPQKIRVTQYRSENCSCGSMKNTIHRRKTRRKMVSKVFRNILIYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -