Xruf042505.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014502.1:13231616-13233478[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-11 1.2e-08 36.1 0.0 1 40 18 58 18 62 0.88 2 2 8.4 1.2e+03 0.8 0.0 13 23 132 142 130 144 0.85
Sequence Information
- Coding Sequence
- ATGCCCACTCGTTATAATCGCAAGATTTCGGCAAAACCTCGAAaattatggacacaagaaaattTAGTAGAAGCCCTACAACAAATTAATGATGGTGCAATGGGTATAAATGAGGCATCTCGAATTTACCAAATTCCTGCTAGGACTCTGCGTCGTAGAAGGCAGTCTGGTAATACCCAAGATCTTCCTTTGGGACCGTCGGGGTGCTTAGGAACAGAAAACGAAAAAAGACTGGTGAAACACATAAAAGCCTTAGAAAAAAAAGGGTTTGCGCCAGATCGTGAATGTGTCAGAAGTATCGCATACCAGTTTGCTGAAAAGTTAGATATTCGCCACAACTTCAATCGGGAGAAACAAATGGCCGGTTACGATTGGTTTAATTCGTTTTCACGGAGAAATAAGGAGCTGAGTATCCGGCAAGCTCAAGGGCTTTCTCTTGCCAGAGCTGAAGGAATGAACCGAGAAGAAGTTGGAGGCTTTTTTAATTTGCTGACGGAAGTATTCACAGAGTACGGTATTTTTGGGAAGCCTGGTAACGTATTTAACATGGATGAAACCGGGTTTCAAATCAATAATGAATCTGGTTTTGTACTTGCCAGCAGGGGTGCCAAAGATGTGCATACAGTTACTTCCAGTGAGAGAGGTGAGAATGTTACCATCATAGCCTGCTGTAACGCGGAAGGCCATTTTTTGCCTCCCACTGTTATTTTTAAGGGCGTCAGGCAAAAAACCGAATTTGGGGATGGACTTCCTCCCGGGTCAAAAGTACTGATGAATAAAAAATCGTCTTACATCTCGACTGAGCTCTTCTTTACCTGGCTTCAAGAGCATTTCTTTCCTAAAAAGCCTCCTGGTCCAACTATTTTGATACTGGACGGTCATTCATCTCATAGGAATTCACTGGAAATGTTGGATTTCGCAGAAAGCCACGAGATAATATTAGTTTGTTTGCCGAGTCATACCACGCAAGCGCTGCAGCCATTAGACAGGGCTTTCTTTGCGCCATTGAAGCATTTTTTAAAAAAGGAAGCTCGAAAATGGATGCTAAATAATCCTGGAAGGCGCATTACTCGTCTTCAAGTGGGTCAGATTATTGGGAATGCTTGGGGAAAGTCGGCCACAGTTGAGACTGGCATTTCAGCATTTAGGGCAACAGGGATTTATCCCCTCAATCCCGATGCAATACCAGAACATTTCTATGCTATTTCTGACGGTATGCAATCGGTTGGTACATCAGAAGTGGATGTGAATACTTCTGAGGATACACGAGCCTCAACCAGCAACTCCAATGAGAATACGATCCCACTTGCCACCCCAAGTACGTCAACTGCAGACGCTCCTAAACGTATCAAGAAATCTTCGCAAACAAAACGTTCCAAAACATGCGTGCCTGCTACCGCACATTCGCGACTTCCACCTGAAGTTGAGTCAGAAGAAAATTTGATAACCCCTTccaaatttttaattgaaataagTCCCGTGCCCGTGAtacagaagaaagaaaagaaaaggaaGAAACAGAGTGCCGAAGCATTGACAGGGCTGAAGGTTAAGGGAAAAGTGGTGGAAGAGAATTTCACAGCATCTGATGAGGAGCCTCTGGTCCTTAAAACTCAAAAAGATGTAAGTGAGCTACCTGGACCATCATCTTCTGCGGAAGAGGAAAAGGAAGAAGACGTCTGTGTGGAATGCTGGGAAAGCTATTACCGTACAAGAAAAACTGTGGATTGGGTGCAATGCATAATGTGTAAAAAATGGTTGCACGACGACTGTACAATGTACAAAGACAAATGTAACGGTTGCGGACGAGATGCAGTTCGAAAAGAGCAGGAGCATGCCAAGAAACGGCGAATTGTGCATTGA
- Protein Sequence
- MPTRYNRKISAKPRKLWTQENLVEALQQINDGAMGINEASRIYQIPARTLRRRRQSGNTQDLPLGPSGCLGTENEKRLVKHIKALEKKGFAPDRECVRSIAYQFAEKLDIRHNFNREKQMAGYDWFNSFSRRNKELSIRQAQGLSLARAEGMNREEVGGFFNLLTEVFTEYGIFGKPGNVFNMDETGFQINNESGFVLASRGAKDVHTVTSSERGENVTIIACCNAEGHFLPPTVIFKGVRQKTEFGDGLPPGSKVLMNKKSSYISTELFFTWLQEHFFPKKPPGPTILILDGHSSHRNSLEMLDFAESHEIILVCLPSHTTQALQPLDRAFFAPLKHFLKKEARKWMLNNPGRRITRLQVGQIIGNAWGKSATVETGISAFRATGIYPLNPDAIPEHFYAISDGMQSVGTSEVDVNTSEDTRASTSNSNENTIPLATPSTSTADAPKRIKKSSQTKRSKTCVPATAHSRLPPEVESEENLITPSKFLIEISPVPVIQKKEKKRKKQSAEALTGLKVKGKVVEENFTASDEEPLVLKTQKDVSELPGPSSSAEEEKEEDVCVECWESYYRTRKTVDWVQCIMCKKWLHDDCTMYKDKCNGCGRDAVRKEQEHAKKRRIVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01535784;
- 90% Identity
- iTF_01535784;
- 80% Identity
- iTF_01535784;