Xruf034072.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014499.1:17093874-17094392[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-12 9.7e-10 39.6 0.1 3 44 51 92 49 93 0.95
Sequence Information
- Coding Sequence
- ATGCCCATGTTAACAACGAGCTTAGAAGCCCATTTAGTTGCCTGCTCTTTTTATTGGTACCTATTGCCTACCTTGTTTCAAGATGAGTATCTTTACAGAAAAATGCCAAGAAAATATCAAAGATTTTCACAAAGAGCGTCTTGGTCTGTTGAAGACTTAGAAAATGCGATGCGGGCAATATCTGAAAAATCTTTAAGTATAAATAAGGCTAGTAAGCTTTATAAAATACCCAACAGAACACTAAGGAGACGCATCAAAAACAAAGTTACCACAAAAAAAACTTTAGGGAAACACCCTGGGTTGGGGTTTGATAACGAGAAACGTCTAGTTTCCCACATTATGAGGCTCCAAAAAGCCAGATTCGCACCAACTCCGAGCACAGTGCGTAGTATTGCATATAGCTTTGCGAAATCAATTGGCAAGGACAATATTTTTGGTCCCCGAGGTGCTGAAAAACAACGTGCTGGAGAACATTGGTTCCGATCCTTTATGGACAGATGTGCAGAGTTGTCGATCTGA
- Protein Sequence
- MPMLTTSLEAHLVACSFYWYLLPTLFQDEYLYRKMPRKYQRFSQRASWSVEDLENAMRAISEKSLSINKASKLYKIPNRTLRRRIKNKVTTKKTLGKHPGLGFDNEKRLVSHIMRLQKARFAPTPSTVRSIAYSFAKSIGKDNIFGPRGAEKQRAGEHWFRSFMDRCAELSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01535779; iTF_01535794; iTF_01535770; iTF_01535771; iTF_01535772;
- 90% Identity
- iTF_01535779;
- 80% Identity
- iTF_01535771;