Xruf031539.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- -
- Assembly
- GCA_963966045.2
- Location
- OZ014498.1:22714500-22724432[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-06 0.00072 20.8 0.0 2 35 19 51 18 56 0.92 2 2 8.8e-06 0.0013 20.0 0.0 1 41 1951 1992 1951 1994 0.94
Sequence Information
- Coding Sequence
- ATGCCtcgaaaatacaaaaaacaattaGGGGGCAGAATTTACAAGAACTATTCCGACGAAACGttgcaaaatgcattaagaGATGTCGAAAATGGAATGTCCTTGGGGGTGGCAAGTCATACATATGGAATTACCAAGTCGACTCTATCGAGAAAAATGAGAAATTTGTTCTCACTGATCCCTGGGAGACAGCCTGTCTTTTCCAAGGAAGAGgaggaaatatttgttaataatattCTTTTGGCTGCACAGTGGGGATTTCCTTTAACTTCCTACGACATCAGGTTAATAGTGAAAGAATACTTAAATCGCAAAGGCATTCGGGAAAAGCGATTTGGACGGAATAACAATATGCCTGGCGTGGATTGGGCGAGGCACTTTTTAAACAGGCATAAATCCAAGCTCTCTGCAAGATTATGTGAAAATATAAAGCGAGCAAGAGCTCAAGTGTCCAGCGACATTATTAATGAATATTTTTCCGAATTGGAAAATAGTTTAGAAAATGTGCCAcctgaaaatataattaattatgaCGAGACCAATTTTTGCGATGACCCCGGTCGTCAAAAAGTCATTGTGAAAAGAGGAGCTCGTCATAGTGAGAGATACATGGATTCATCCAAAACCTCAGTGTCTGTCATGATGGCCGGAACGGCTACAGGACATATATTGCCACCGTATATTGTATACAAATCTCTACATTTATATGATACGTGGACAGAAAATGGCATAAAGGGTGCAAGATATAATCGATCTAAATCAGGTTGGTTTGACATAACAATTTTCGAAGATTGGTTTCTCCAAATTGCAATGCCATATTTCCGAAATCTAGAGGGACCCAAATTAATGGTCGGAGATAATTTATCTAGCCACCTTTCGGATCGAGTAATGCGTGCATGTAGGGAAAATGATGTAAGATTCGTACTATTGCCACCTAACTCTACGCACTTATGTCAGCCCTTAGACGTAGCGTTTTTCAAACCAGTCAAATCTGCTTGGAGAGATGTTTTACTCACAtggaaacaaaaaaacaaaggtTGCATTCCAAAAGACCAATTTCCGAGATTGTTACGGCAAACTCTTGAAAAAGTTAATCCTGAAAATTTGGTGGCAGGGTTTAGAGCCACAGGAATACATCCTTTGAATAGAGAAGAGGGTGCTGTGgtatacaaaaatattcaaagatCCAAGTGCTACTTGCAGTTAACAGACCAAAATAAGTTGAAAATTCAACCAGATCTAAACAATGTCCTTCCAGAATCCAAGgtatggGAGTATGCAGGTGAAAAAGTATATAATTTTTGCTTGGGTTACCCAACATATTTACTCCACCCAAACAGCTTCAAACCTTCAAATGTGGAAAATAAATCCAACGTCCAAAAACGTTCGACGCAACATTATTTCGTTGGAAGACGCAGGGCTCAAACACAATCCCAGTATCTTAATTTCGGCAAAAATGGAGAACCAGGAAAAGCAGAAGCAGAATCGACTCTCGAGGGATCTAAAGCAGTAGTCACTGGAACTAGTGGTATGGGTCAAGCACAGAGCCAAAGTACTTTCGATAACTGTGAAGAATGCTACTTACAAGAACAAATTATCCACTTGGATCGTACGCAGTACCCTGGTCAAACTCCAGAGTCTGCAGTTCAACCACCAACATTTCCTACAGGTCCAAATGGGCATCCCACTTACCCAGGTCAACCTACCACCGGTACTCTACCGCCTGGAGGGCAACTTCCTGATCGACGGCCATTGATACCAAGTCCAGGACCTATTGGAACTATTCCAGGTCAACCGCCTGGAATACAGCCTCCTGGACAAGTACCCTTCATACCGGGACCAACGCCTGTTGGAACTATTCCTGGTCAACCGCCAGGAATACAACCTCCTGGGCAATTACCATTCATACCGGGACCAGTGCCTATTGGAACTATCCCAAGCCAACCGCCTGGACAAATACCCTTCATACCAGGACCAGCACCTATTGGAACTATTCCAGGCCAACCACCCGGAATACAACCTCCTGGACAAAGACCATTCATACCAGGACCATCGCCTATTGGAACTATTCCAGGTCAACCGCCTGGAATACAGCCTCCTGGACAAATACCCTTCATACCAGGACCAGCACCTATTGGAACTATTCCAGGCCAACCACCCGGAATACAACCTCCTGGACAAAGACCATTCATACCAGGACCATCGCCTATTGGAACTATTCCAGGTCAACCGCCTGGAATACAGCCTCCTGGACAAATACCTTTCATACCAGGACCAGCGCCTATTGGAACTATTCCAGGTCAACCGCCTGGATTGCAACCTCCTGGACAAGTACCGTTCATACCAGGACCAGCACCTATTGGAACTATTCCACGTCTACCGCCCGGAATACAGCCTCCTGGACAAATACCGTTCATACCAGGACCAGCGCCTATTGGAACTATTCCAGGCCAACCACCCGGAATACAACCTCCTGGACAAAGACCATTCATACCAGGACCAGCGCCTATTGGAACTATTCCAGGTCAACCGCCCATAAGGCAGCCTCCTGGACAAATTATTCCGTTCATACCAGGACCAGCGCCTATTGGAACTATTCCAGGCCAACCACCCGGAATACAACCTCCTGGACAAAGACCATTCATACCAGGACCAGCGCCTATTGGAACTATTCCAGGTCAACCGCCCGGGGTACAACCTCCTGATCAAGGACCAGGATTAACACATGTTGGACTACAGCCTGTAGGTCCACATATACCAAGTCCACCAGGTCACCCTCTGCTACCTAGTGACAATCAAGTTCAAGAGCCGCCTGGAGGAAAATTTCATGGCCAATTCGCAGGAGAATATTATGGCAATGGCAGACAATATTATGACGAATAtggaagaataatttattcatcgGGAACTGGAAATGGTCGCACACCACAAGGAGAATTTTCTGGCAAGTTTGCTGGTGACTACAATACAAATGTGGGACAATCCGGAAAATTCGCTGGAACTTTTGCTGGCCAATATGAACCTCAGAAGTACCCATTAGGAACTCCTATAGAAACAGGACAAGGCGTTATAAGAGTACCACCATCAACTGCTGGTGTGCAACCTGGTCCTGTTGGTACTGGAGTACCGCAGTATCAATATGGGCCAAGTGGACAGTATGTGCAACCTAGTACTGTCGCTGGTGGTGGAATACTATATGGTCCAGACGGACAACAGTACGTACAACCCGGTACTGGCGGAAAACCTCAATATCAATACGGACCAGGAGGACAACTAATCGTAGGATCGGGAGGGCAATATGTACAACCTGGCCAAACAGCAACACCACAATATGGGCTCGGGAGTCGACCAATTGTAGGAACAACTGGAGTGGTATATGGACCAGGTGGAGAAATAATTCGAGGACCTGGAATACCTCAATATCAATATGGTCCAGGAAGACAGCAACAAGTACAGCCTGGTGGTACTGGAGCTGATGTACAACCTGGCCAAACAGCAACACCACAATATGGGCCAGGAGGTCAACCAATTGTAGGAACAACTGGAGTGGTATACGGACCAGGTGGAGAACTAATTCAAGGACCTGGAATACCTCAATATCAATATGGACCAGGAAGACACCAACAAGAACAGCCTGGTGGTACTGGAGCTGATGGTGGGGGAGGAGGAGCAAGAATACCCCAATTGGTATATGGTGTAGGAAATGGAGGAACTCAGGTAGGAGCAGGTGGTACTGGAATTTCAAAGCATCAATATGGGCCAAGCAGCCAACTCGCCGGTGGACCGCAATATGTCCAACCTGGTGCTCAAGGTGGTACAAATGGTATCGTACCTACATATCAATATGGACCAGGAGGACAAGTAGTAAGTACTGGGCAAAATGGATATCAGTACGGATCAGGCAGTCAATACACACAACCAAGTACTGGACCAGGAGTACCTGAATATCAATATGGAGCAGACAGACAACCCATTGGAAGACCACAAGGTAATGGTGGAGGACCATCGGGAGTACCTCAGCACGGGCCAGGAGGACAACCTATAGGAGGAATTCCACAACAATATGGGCCAGGAGGACAACTTACTGGAGGAACTCAACAGCAGTATGGCTCTGGAGGTACCCCAACATACCAGCAACTTTCGGGAGGTGGAGAAGTGAGTGGAGGAGAGATTGGTACAGGGCAAGGTCAATATTTGTATGGCCAACAAAATGGTGGTGGTATAGTTGGACTGCAAAAAGTACCGGATGATGCAGATTCTCAGGCTGAATCTTCAGTTCAACAAATCAACAATGAAACAAAAGCGACTGCAACGGCACAAGGGCATTTTGAAGGTGGGCATGCTCAGTCACAAGTACAAGGGTCATATTTTGGTACCGGGTCATTCAGTGCTTCTGCCGGTAGCAATGATGGTAAACGAGGTGCAAGAACTCACGTAGAAGGTGGTGAGAACGGCGCCTTAAGTTCTGCTCAAGGTAATGGTGGTTTGGGTAAATCACAAGCACAAGTGGAGCTAATGTCAGAGACAGGAGATACTACTTCTAACGCTCAAAGTAGTGGATTTAATCATGGTACTAACACTTTAGTTCAAGCTAGTGAAAAGGGTGGTATGGCTGATGCTCAAGCTAATGGACCCGGCAGCACTTCATCTCAGGCACAAATTGGTTTCTTGCCTTATGATGACAACGAAAAAGATGAGCAAGAGTTACCATTTAGGGGAGGTGGTACAGCTAGTGCTCAAAGTGGTACCCATTCCGGTCAAACACAAACACAAATTCAAGGTAAATTCAGTTTTGGGATTAAATATTCGGGTTCAGCTCAAGCTGGTTCAGGAAATACAGGAAATTTTACTTTCGGAAGGAATCAAACTCAGTCGCAGTTTAATTTTGGGAAGATGTCAGCAAGATCTGGTAATAAAACCAATGGTATTGCTTCGGAAAGGCAGCAAGGACGTCAAGCTGTATCTAAGCAATCAGAATTAAGTATTTCACAACCAAGAATAAGGGTAGTTAATAGTACTACCCCTAAACCAAACGAGCCAACTAAAATTTCTCTTCCTACTGCTGAAAATCAAACAGCAGTTCCAGTACCTGGTGAAGTGGATACTTACAGCGCCGAATATGATGATGGAGGGGAATATTATGATGATCTTGAGGAAGAAGTACCGGTCTCACAATCCACTCAAACTAGAAACAGTAATTTTGGGCACAACACAAGGAACCAAAGACAACACATCATTCTAGATCCTTTAGAGGATTTAGATGCAACAGTGTATCAAGCACGTGGAAGGACAGAAGCTCCTTTAAAGTCTATTTTAGAACCAGGGGAGATAGTACCGGGTAATCCGAGCATTCAAATTCCTCAAGGGTTTAGAGGAAGGATAACTTCTATAGCTAATGGGCCCAGAACGACAGCAACGGGGCCACATTCTCAAGCCCAAAGCGTTTCCTTAAAACCAGGCACgggaagaataatttataagaAACCAAAACCTATTTATGCAGTATCGTCAAGAACAGTGACCCATAACGGCTATTACGGTAGTGGTGCTGGGTATACTTACCAGCCAGTACAGTACCAGTTTAAGAGCAGCAAAGGTTATCCGGGGTTTGTTGCAGTGACGAAATCAGAAACTGGTTCAAAGGATATTTACACTGGCCAAAAAACTCCGGCTGTTTCTTATAGCCAATCTTCCACTTGCGGCATTTTTACCAACACTTGTGTTTATATTAAAGGCAATAAAGTTTGCATGCCCAAACCAAAGACAAATCCAGATGGGAGCCCTATTATATacacGACTATGGGCCGTCAGTATCAGAAAAAGTTGGGTGTAAGGCAATATCGTAATTATAAGGAGGAAACACTGAACCGAGCTCTCAATACTGTTCAAAATAGGAACGTTTCAATTCTGGCGGCTTCAGAATTATACCACATTCCCAGAAGAACTCAGTGGAATAAGATTCACAGAGGACATCTAGGAAAACCTGGATGTATTACGGCTCTTACAGAAGTCGAAGAAACTGCTTTTGTTGATGTTCTATTGGCAACAGCAGAATACGGAAGTCCACAGACCAGTTTCGACCTACGGATGTGTGTAAAACGTTATTTGGATAACGAAGGGAGAACACTTCCTCAATTTACGAAGAACCTTCCGGGAAAAGATTGCTTACCAGTATACGTGGTATACAAAGCTGAAAGGCTGCATGACCAGTGGACTTTAAGGGGTCCTAGCAAAGCGAGGTACAATCGTAGTAAATCAGGATGGTTTGATGGGGTGTGCTTCGAAGATTGGTTTACCACAATCGCACTTCCCTGGGCCAAAAATAAGGAAGGACGAAAGCTCCTGATAGGTGATAATCTTTCATCACATTTCAATGTCAGTATCATCATTGCTTGTCAGAGAGCTAATATCAAATTTGTCCTACTACCACCCAACTCTACCCATGTAACACAGCCATTAGATGTTGGCTATTATGGTTGGAAGAAGCTGCTCACAAATTATAAACTTCAGAATCCAAGAGAAAAAACCCTTAACAAAACTACATTCCCTAATTTACTGAAAAGGCTCGTCGATGAATTAAAGGTTAAtgatatgaaaaatataaaaagtgCCTTCAGAGCTACTGGGATCATTCCATTCAACAGAAATGAAGTCCTGAAAAGGCTACCTAACCAACGAACAGCAGAAAACGTAAGGCAAGCAGTAAATGACACGCTTTTGGAATACTTGAAAGAGACCAGGTCACCATCCGCATCTACAACTCCAAGAAGGAAAAAAATGCTAAGAGTAAAACCTGGCCAATCAGTAGGAACTGATGACTTTTTAATGGATAACCACAACAGCTTGGACAACAGTGATGTTCCAGATGAAGAAAACGTGCCATCTACATCTGGAACCCAGATAAATCTGGAAAACATAAATGAAACCGAAGTTTTTTTGGAGGATGAATTGTTGAATATAGGCAACAGTTCCGAGATGTTGGAAGATGCAGTTGAAGAAGATGATGAACTGCCTCTTGGTTCActcattaataaaaaaaatcccCAAAATGGTGATTTTGTGATAGTAGATTTCCCAACTAAGAAAACTGTTAAACATTATATTGGACAAGTTATAGAAatagatgatgatgatgggttTGTGGTGGAGTATatgagaaaaaagaaaaacggaTTTGCGTATGCTGACGTTGAGGACAAATCATACGTGAAAGAAATAGATATCGTCAAGAAATTGGAGAAACCAACCATATCTTCCAGGGGATATTATAATTTTAATAGTGACTTCAGTTTATATAATATTTAG
- Protein Sequence
- MPRKYKKQLGGRIYKNYSDETLQNALRDVENGMSLGVASHTYGITKSTLSRKMRNLFSLIPGRQPVFSKEEEEIFVNNILLAAQWGFPLTSYDIRLIVKEYLNRKGIREKRFGRNNNMPGVDWARHFLNRHKSKLSARLCENIKRARAQVSSDIINEYFSELENSLENVPPENIINYDETNFCDDPGRQKVIVKRGARHSERYMDSSKTSVSVMMAGTATGHILPPYIVYKSLHLYDTWTENGIKGARYNRSKSGWFDITIFEDWFLQIAMPYFRNLEGPKLMVGDNLSSHLSDRVMRACRENDVRFVLLPPNSTHLCQPLDVAFFKPVKSAWRDVLLTWKQKNKGCIPKDQFPRLLRQTLEKVNPENLVAGFRATGIHPLNREEGAVVYKNIQRSKCYLQLTDQNKLKIQPDLNNVLPESKVWEYAGEKVYNFCLGYPTYLLHPNSFKPSNVENKSNVQKRSTQHYFVGRRRAQTQSQYLNFGKNGEPGKAEAESTLEGSKAVVTGTSGMGQAQSQSTFDNCEECYLQEQIIHLDRTQYPGQTPESAVQPPTFPTGPNGHPTYPGQPTTGTLPPGGQLPDRRPLIPSPGPIGTIPGQPPGIQPPGQVPFIPGPTPVGTIPGQPPGIQPPGQLPFIPGPVPIGTIPSQPPGQIPFIPGPAPIGTIPGQPPGIQPPGQRPFIPGPSPIGTIPGQPPGIQPPGQIPFIPGPAPIGTIPGQPPGIQPPGQRPFIPGPSPIGTIPGQPPGIQPPGQIPFIPGPAPIGTIPGQPPGLQPPGQVPFIPGPAPIGTIPRLPPGIQPPGQIPFIPGPAPIGTIPGQPPGIQPPGQRPFIPGPAPIGTIPGQPPIRQPPGQIIPFIPGPAPIGTIPGQPPGIQPPGQRPFIPGPAPIGTIPGQPPGVQPPDQGPGLTHVGLQPVGPHIPSPPGHPLLPSDNQVQEPPGGKFHGQFAGEYYGNGRQYYDEYGRIIYSSGTGNGRTPQGEFSGKFAGDYNTNVGQSGKFAGTFAGQYEPQKYPLGTPIETGQGVIRVPPSTAGVQPGPVGTGVPQYQYGPSGQYVQPSTVAGGGILYGPDGQQYVQPGTGGKPQYQYGPGGQLIVGSGGQYVQPGQTATPQYGLGSRPIVGTTGVVYGPGGEIIRGPGIPQYQYGPGRQQQVQPGGTGADVQPGQTATPQYGPGGQPIVGTTGVVYGPGGELIQGPGIPQYQYGPGRHQQEQPGGTGADGGGGGARIPQLVYGVGNGGTQVGAGGTGISKHQYGPSSQLAGGPQYVQPGAQGGTNGIVPTYQYGPGGQVVSTGQNGYQYGSGSQYTQPSTGPGVPEYQYGADRQPIGRPQGNGGGPSGVPQHGPGGQPIGGIPQQYGPGGQLTGGTQQQYGSGGTPTYQQLSGGGEVSGGEIGTGQGQYLYGQQNGGGIVGLQKVPDDADSQAESSVQQINNETKATATAQGHFEGGHAQSQVQGSYFGTGSFSASAGSNDGKRGARTHVEGGENGALSSAQGNGGLGKSQAQVELMSETGDTTSNAQSSGFNHGTNTLVQASEKGGMADAQANGPGSTSSQAQIGFLPYDDNEKDEQELPFRGGGTASAQSGTHSGQTQTQIQGKFSFGIKYSGSAQAGSGNTGNFTFGRNQTQSQFNFGKMSARSGNKTNGIASERQQGRQAVSKQSELSISQPRIRVVNSTTPKPNEPTKISLPTAENQTAVPVPGEVDTYSAEYDDGGEYYDDLEEEVPVSQSTQTRNSNFGHNTRNQRQHIILDPLEDLDATVYQARGRTEAPLKSILEPGEIVPGNPSIQIPQGFRGRITSIANGPRTTATGPHSQAQSVSLKPGTGRIIYKKPKPIYAVSSRTVTHNGYYGSGAGYTYQPVQYQFKSSKGYPGFVAVTKSETGSKDIYTGQKTPAVSYSQSSTCGIFTNTCVYIKGNKVCMPKPKTNPDGSPIIYTTMGRQYQKKLGVRQYRNYKEETLNRALNTVQNRNVSILAASELYHIPRRTQWNKIHRGHLGKPGCITALTEVEETAFVDVLLATAEYGSPQTSFDLRMCVKRYLDNEGRTLPQFTKNLPGKDCLPVYVVYKAERLHDQWTLRGPSKARYNRSKSGWFDGVCFEDWFTTIALPWAKNKEGRKLLIGDNLSSHFNVSIIIACQRANIKFVLLPPNSTHVTQPLDVGYYGWKKLLTNYKLQNPREKTLNKTTFPNLLKRLVDELKVNDMKNIKSAFRATGIIPFNRNEVLKRLPNQRTAENVRQAVNDTLLEYLKETRSPSASTTPRRKKMLRVKPGQSVGTDDFLMDNHNSLDNSDVPDEENVPSTSGTQINLENINETEVFLEDELLNIGNSSEMLEDAVEEDDELPLGSLINKKNPQNGDFVIVDFPTKKTVKHYIGQVIEIDDDDGFVVEYMRKKKNGFAYADVEDKSYVKEIDIVKKLEKPTISSRGYYNFNSDFSLYNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -