Xruf046126.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- lov
- Assembly
- GCA_963966045.2
- Location
- OZ014503.1:21665742-21670265[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-08 9.5e-06 26.8 0.0 4 42 379 417 376 419 0.92 2 2 3.2e-14 4.6e-12 47.0 0.0 1 44 440 483 440 484 0.95
Sequence Information
- Coding Sequence
- ATGTCCGAGTCGCACTATTCACTTCGGTGGAACAACCATCAGAGGCAAATAGTGGCCGCTTTCGACGCACTTTTTCAGGCGAGAACGCTTTTGGACGTGACGCTAGTCTGCAGAGATCGCTCCGTTTGGGCCCACAAGGTGGTCCTAAGTGCGTGCTCGCCTTTCTTCCAACGGATCCTCCAGGAAACGCCGTGCAAGCACCCGGTGATAGTCCTCAAGGATTTCAACGGGTGGGAAGTAGAAGCGATTGTTGATTTTATGTACAAAGGTGAGATAAGCGTCATGCAGGAGCAATTGCAAGCGTTGATAAGAGCAGCGGAAAATTTGCAAGTACGCGGACTAGCCCATCAAGAAAACATGGACAAAGATTCGAGTACCGCTTCTAACCAAGCCCCGACCCCATCGACATCACCTGTCGACCACGAGAGAAATTTCTTCGCGAACGGAAGGTTCCCCACGCCGGGGGTGACGGCACGCTCTACAGAAGTTCGCCCTTCTTTCTCCCCAGTTCCAGTGCCAAGTGTAGACACGTCCTCCCTAAGACTTCCTCACATGGCTCAACTGCAATTCCCCGAAATGTTGTTACCCCGGCAAGGCAGCCAGTCCCCCATCCCGAGAAGAAAACAAGCGCGGCCGAGAAGAAGGTCCGGAGAAATGTGCGGTGTTCAAGATCTCACTACAAATACCCCAAAAAACACCACCGAAGAAACCGCGGAGAATCTGTCTTTGAAAAAACCGAACGTTGAAGACAAGCAGTGCAAAGACACCGAGCCCGCGGAGAAAAGTCCGACGCCTGATAACGCGCAAAGTCCAGAACTAAACTTGAGCATGCAAAATCAAATGGATGCCTCACCTTCCCTGCCCAGCTTACCTCCAGTTTTAAATATGGCCCAGGAGATGGAGAGCCagcaacaaatggcggcctatCCACAGATGCCAGCGTTGGCGATGTCTCCTCACAATAAATTCTACGACCCGCACATTGGATTGTACGCGAGCCTGGAGGGCTGCAGGAGCAATCCTTTTTTAGAAGCAGCTGATCCGAGATGCAACCCCGACCCTCAGCTCTACGTCAAGAAGAAAAAGTTATATTCAGCACCAAAAGGAGGTCCACCACGCCCCTGGTCGGACAACAAGATGATACAAGCTTGCATATACGTTTGGAGTAAAATCATGTCAGTGAGTCAAGCTTCTAAATGGTCAGGAATACCTTATAATTCCTTAAATATGTACAAGAACCGAACATACGGGAAGAATATCGTGGGGAGACCGAAAGGGCAGCATTCGGCTCCGAGAGGGGGTCCACCTCGATCATGGACGAACAACGAACTCACAACTGCCCTAGCGCAAGTATGGAATAAAAGGATGACGACGAGTCAGGCTTCCAGAGTTTACGGAATTCCCTACAACTCCCTGCTTATGTACGTCCGTGGGAAATACGGTAAAAGCCTGAAACTTGAACAACTTCGAAAAGACTGTATCGGCGGAGTAGATTCCATGGATCTCATTAACTCCAGCAACAACAACAACTCTTGTAAGTTAGAGAGGGAATTAGAGCAAAGTCAACAGAACACGAGGCCGCCCAGCAGGGAAGAAGTGCCTCATCCGTCGATGTTCAATCCTTTCATGGCGAATTTCCACCCGGAGTTTGCAGGGGGATTTCCGATTCCTGTAAACATGCTCAGTCTGTTCCCTCAGAGCGAGAAGAACCGCGACCATAACCAGATCAACTCGGAGGAAGACTGCAAGTCTCTTGGGGTGAAAAAAGAGATGGAAGAAGAGCCTCAAGATTTATTCCGTCCGCCTTCGATCTCGAGGGAGGAGAGGCGGGAACTAGTGCAACAAAACGGGCAGGATTAG
- Protein Sequence
- MSESHYSLRWNNHQRQIVAAFDALFQARTLLDVTLVCRDRSVWAHKVVLSACSPFFQRILQETPCKHPVIVLKDFNGWEVEAIVDFMYKGEISVMQEQLQALIRAAENLQVRGLAHQENMDKDSSTASNQAPTPSTSPVDHERNFFANGRFPTPGVTARSTEVRPSFSPVPVPSVDTSSLRLPHMAQLQFPEMLLPRQGSQSPIPRRKQARPRRRSGEMCGVQDLTTNTPKNTTEETAENLSLKKPNVEDKQCKDTEPAEKSPTPDNAQSPELNLSMQNQMDASPSLPSLPPVLNMAQEMESQQQMAAYPQMPALAMSPHNKFYDPHIGLYASLEGCRSNPFLEAADPRCNPDPQLYVKKKKLYSAPKGGPPRPWSDNKMIQACIYVWSKIMSVSQASKWSGIPYNSLNMYKNRTYGKNIVGRPKGQHSAPRGGPPRSWTNNELTTALAQVWNKRMTTSQASRVYGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGVDSMDLINSSNNNNSCKLERELEQSQQNTRPPSREEVPHPSMFNPFMANFHPEFAGGFPIPVNMLSLFPQSEKNRDHNQINSEEDCKSLGVKKEMEEEPQDLFRPPSISREERRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01536720;
- 90% Identity
- iTF_01536720;
- 80% Identity
- iTF_01536720;