Xruf015669.1
Basic Information
- Insect
- Xestobium rufovillosum
- Gene Symbol
- retn
- Assembly
- GCA_963966045.2
- Location
- OZ014495.1:7517216-7526672[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-19 4.1e-15 57.5 0.0 17 89 249 319 237 319 0.93 2 2 0.97 5.9e+03 -0.7 0.0 5 38 420 472 416 476 0.50
Sequence Information
- Coding Sequence
- ATGAGTGAGAATCAAGCAAAGAGAAAGGACCCAGGAAGTGAAAGCAAAAAGGAGTTAAAAAGAAGGAGATATAATGGAATGGAATACGAAAATCGgaacaaaaagaaaatttctGCTAAAGAAGCACCAAGTTTGGAGAATGATATTGAGAAAAGGAGGATGCAAGCAAAACTCGAACTACATCAAAGAAAGGCAGAAAAAGCTAGattaaaaatggaagaagatgctATAATGTCACAAGTACCGAGTGCCAACATTACAACGATGTCCGTTGACTTAGAACAAGTTTTATTTCTACCAACACTTACCCATACCCAGATGTTTTACAGCAGACAACTTTCGTGTTATAACCTAGGAATCCACATTTCGGATACTGGAACTGCACATATGTGCCTTTGGAATGAATCCTTAACAGGCAGAGGAGGCAATGAAATTTCATCAGCACTTCTAAAATGTCTTGCTTCACAGGCCAACCCATTGAAAAGAAAGTTAGTAATCTGGTCAGATAACTGTATAGGACAGAATAAGAATAAAATGATGCTCTTTCTTTTCGTATATTTGGTGGCCACTGGAAAATTCGATCAAATCGAACAAAAATTTCTAGTAAGTGGTCACTCTTATTTGGCCTGTGACAGAGACTTTGCACAGATTGAACGACTAAAGAGAGTCACAAAAAACTACGTACCTGACGATCTTGAAAATATGATTAGAAGTGCACAGCATAAAAATCCATTTAATGTTATTCGGACGCCTATTAATCGACTCCCCATTATGGCAAAGTCTGTGTTAGATCTCTACGAACTGTTCAACTTAGTCGTTGCCAGAGGAGGATTAGTAGACGTCATAAATAAGAAATTATGGCAAGAGATCATCAAAGGTCTTCACTTACCTTCGTCCATAACATCCGCCGCATTCACTCTTCGCACTCAatACATGAAATACTTATATCCGTACGAATGCGAGAGAAAAGGACTGAGCACATCTCCGGAACTGCAAGCAGCTATTGATGGCAACCGACGGGAAGGCCGTCGTGCCAGCACTAACTACCCGCAGTACGAGGGACTTCAAAGATCTCCAAATCCAAATCAAATAAATCAGCTGTCTCATCTATCTTTAATCAATCCACATCAGGAGCTCGCTCGTATGAGCGCTGGGCCCATTCGCAATGGGGTTGGCGTTCATCATCCTAGTCATCCCCATCCCATGGGCCAACCCCTCAACGGCGGACCGTTGCCTGCATTACCTCCCAACAACGACTTTGAAGCCAGAATGATGGAGTACATGAAGATGTTGAACAAAGAAATTCGAGGTTCTACGAGTACTACCACAAGACGCGATGAAACATCTCCTCCTACCGCCGCTTCTCCTTTGAACCCCTTGGAACTTCAGCGGTTGAATTTGTGGTCAATGTATCAGCAAGCAGCATTGGAACCACAAAAAGAGGCACTGAATCTTTCAGATCCTGCTCCTCCGCTGGCAGTTTCGGTGAAACGAGAACAGCCTAGAGACTCGTCTCCTCCCTGCAAGAAGGTCCCGAGGGACGAACATGATGCACCGGGACCTTCGCCGACGCTTCCGAATACGCATATCAAAATTAAAGGTGCAGATTCGCGCAACGGGGGCGAGAAGTCAGTCACCATAAGCATGGAGTTGAACGGAGTCACATATTCCGGCGTGCTGTACCCGCAGTCGACCTCTAACGGCAGGACGACGCTAACTTCGTAA
- Protein Sequence
- MSENQAKRKDPGSESKKELKRRRYNGMEYENRNKKKISAKEAPSLENDIEKRRMQAKLELHQRKAEKARLKMEEDAIMSQVPSANITTMSVDLEQVLFLPTLTHTQMFYSRQLSCYNLGIHISDTGTAHMCLWNESLTGRGGNEISSALLKCLASQANPLKRKLVIWSDNCIGQNKNKMMLFLFVYLVATGKFDQIEQKFLVSGHSYLACDRDFAQIERLKRVTKNYVPDDLENMIRSAQHKNPFNVIRTPINRLPIMAKSVLDLYELFNLVVARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECERKGLSTSPELQAAIDGNRREGRRASTNYPQYEGLQRSPNPNQINQLSHLSLINPHQELARMSAGPIRNGVGVHHPSHPHPMGQPLNGGPLPALPPNNDFEARMMEYMKMLNKEIRGSTSTTTRRDETSPPTAASPLNPLELQRLNLWSMYQQAALEPQKEALNLSDPAPPLAVSVKREQPRDSSPPCKKVPRDEHDAPGPSPTLPNTHIKIKGADSRNGGEKSVTISMELNGVTYSGVLYPQSTSNGRTTLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -