Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_905147715.1
Location
LR990653.1:11533171-11542867[+]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.12 3e+03 0.1 0.9 4 24 469 489 466 494 0.88
2 2 1.1e-25 2.8e-21 77.0 4.6 1 50 553 602 553 602 0.98

Sequence Information

Coding Sequence
ATGCGTGCAGCGACAAGACGGCACACCGCAAGGACATCTCAGGACAAGTCACTCGTCCTCTATCGTCACGCGCAGGGGGTGCCTTGGAACGGCAGGACGGCGCACTCCAATAGTACGGCCGGGTACGCGGGTTCCATCATCACCTACGGGGGAGCACAAGCTCCCGATAGTGGAAAACACAACCCGTTGCAAGGGACCATTGGATACAGAGTCAACGCCCCTAGCGGCTATGGGTGCGCCGGCGGTTCGGGCGCGATGAGCGGCGGGGGCGAGAACGCGCAGTTCGGCGCCACCGCCGCAATGGTTGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCTTTCTCGCAGATGCAAAACAACATGACTATGGGAAATCCTCAATATGGTGCGATGAACGGCTACGGTCAACAACGCAGCCATAATCCGGGTATGGCCGGAATGGGGATGGGAGGCAACGGCGGAATCAACGGAATGACCAGCATGGGGCAGATGGGAAATGCCGCTATGAATGGTATGAACCCCATGGCGCAGATGGCCAACATGGGCATGCACGCCAACATGATGCCGTCGCAGATGGGGCCTGGACAAATGAGCAGCTCAGCCAAGATGGGACCGGGATACCAAAGGCGACACACGCCATATCCGGCCGGCAACATGCTTATGGGTCAGAGGAAGACGCAGTACATGACTGGGCAGCCTGGCTTTGGGCCGACTCAGTATCCGGCGGGGTACGGCGGCAGACCTGGCTTCCAAGGGCAATACCCACCGCAGCAACCATTAGGACCTAGCGGTAACTTCGGTGCGGCAATGAGAGGAACAATGAGGCAATCAACGCCACCCTACTCTAACCAAGGGCAGTACTTCAATGGTGGCGTGCCAAGCCAGTTCCCTCAGCACCAAAGCAGCAACGCGCAGTATGCTGGGCAATACGGCGGACAGTTCGCGCAGGAGGTCGCTATGCGCACTAACATGACCTATCAGCACAGTCCAGTTCCTGGAAATCCGACGCCGCCGCTTACGCCCGCCAGCAGTATGCCCCCTTACATCAGCCCTAATGGTGATGTGAAACCCCACTTCAACGAGCTCAAACCTCCAATGGGCATGCAAAATGACGAGCTCCGGTTAACATTCCCCGTAAGAGATGGTATTATATTACCACCATTTAGATTAGAACATAATTTAGCAGTTAGCAATCATGTATTTCAATTAAAACCCACGGTCCATTCGACGTTAATATGGAGATCGGACCTTGAGTTACAATTAAAATGCTTCCACCACGAGGATAGACAGATGAACACAAACTGGCCGGCAAGTGTTCAAGTGTCGGTCAACGCGACTCCATTAGTTATAGATAGAGGAGAGAACAAAACATCACACAAACCATTGTACCTGAAAGAAGTGTGCCAGCCAGGCAGAAACACGATACAAATCACTGTCTCAGCCTGCTGCTGTTCGCACCTGTTTGTTTTACAATTAGTTCACCGACCGAGCGTACGAAGTGTGCTGCAAGGTTTATTAAGAAAGCGCCTACTAACAGCAGACCACTGCATCGCGAAGATCAAGATGAACTTCAACCAGACGCCAAGCAATGGTAGCAATGGATCCAACACAGCTAACGACAGGGATAGCGTTGAACAAACAGCTTTAAAAGTATCGTTAAAATGTCCAATCACGTTTAAGAAGATCACGCTACCGGCACGTGGCCACGAGTGCAAACACATACAATGCTTCGATCTAGAGTCGTATTTACAACTGAACTGTGAACGAGGGTCATGGCGGTGTCCGGTTTGCAATAAACCAGCGCAGTTAGAAGGTTTAGAAGTTGACCAATACATGTGGGGTATCCTAAACACATTGAACAGTTCAGATGTTGACGAAGTTACGATTGACAGTGGTGCTAACTGGAAGGCAACTAAAATCGCCAACAATACTGGCATTAAGCAAGAAGAAGATAGCAGTGATGGCAGCCTAGGAAAGCGCAGTAAAGCAGTATCACCGGGCTCAATGAACATGCCTACAATGAACAACTGGGATATGAATCAAGCACTATCACCATACCTTCCTCCTGACATGAACACTATCGCCAGTGGCTCAATGATCTCTTCGTACAACCAAAACGGCCAGAACAGAAATTCAAGTTCGAACAATCAGAATTACGACTTCGGTATGAACAATGGGCCTGGCAGCAACGAGTACGCTGGAAACGGACCTCTATCGCATCTGAATGAGAGCGTCAACTCATTAGATCCTCTCAACGCGATGGAGAAGAGCCTAAACGATCAGATGCCGCACACACCGCACACGCCACACACGCCTGGCTCCGCACACACgccgggcggcggcggcgcgcacACGCCGGGCTCGTCGCACACGCCGGGCCCGCCCTCCGTGGACCACCACTCGCTCACCGACGTGGACATCCCCGCTGACCTCAACTTCGATCCCGCCGCCGTCATAGATGGAGAAGGGACAGATAATCTCAATTTATTGCCGGAGACAAGTGTGGACCCGATGGAGCTGCTGTCGTACTTAGACGCACCTGCGCTTGGTGAGCTCTTAGCAACGCcgccgtcgtcgtcgtcgtcggcaGGCAGCCATCCACCGCGCGCGCCTTCCTCCGACGATCTCCTGGCACTGTTCGAGTGA
Protein Sequence
MRAATRRHTARTSQDKSLVLYRHAQGVPWNGRTAHSNSTAGYAGSIITYGGAQAPDSGKHNPLQGTIGYRVNAPSGYGCAGGSGAMSGGGENAQFGATAAMVAAATTAAMQDSQPFSQMQNNMTMGNPQYGAMNGYGQQRSHNPGMAGMGMGGNGGINGMTSMGQMGNAAMNGMNPMAQMANMGMHANMMPSQMGPGQMSSSAKMGPGYQRRHTPYPAGNMLMGQRKTQYMTGQPGFGPTQYPAGYGGRPGFQGQYPPQQPLGPSGNFGAAMRGTMRQSTPPYSNQGQYFNGGVPSQFPQHQSSNAQYAGQYGGQFAQEVAMRTNMTYQHSPVPGNPTPPLTPASSMPPYISPNGDVKPHFNELKPPMGMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQTPSNGSNGSNTANDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSDVDEVTIDSGANWKATKIANNTGIKQEEDSSDGSLGKRSKAVSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQNGQNRNSSSNNQNYDFGMNNGPGSNEYAGNGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPGSAHTPGGGGAHTPGSSHTPGPPSVDHHSLTDVDIPADLNFDPAAVIDGEGTDNLNLLPETSVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00357101;
90% Identity
iTF_00050494;
80% Identity
-