Basic Information

Insect: Xestia xanthographa
Gene Symbol: -
Assembly: GCA_905147715.1
Location: LR990641.1:25375319-25404085[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.87 1.7e+02 4.9 1.6 1 21 157 177 157 178 0.93

2 9 0.00043 0.086 15.3 0.6 2 20 191 209 190 213 0.95

3 9 0.031 6.1 9.5 0.6 2 23 253 274 252 274 0.95

4 9 2.7 5.3e+02 3.4 0.9 3 21 282 300 281 301 0.93

5 9 1.8 3.6e+02 3.9 0.2 2 23 351 373 350 373 0.90

6 9 2.2 4.4e+02 3.6 0.1 1 14 378 391 378 394 0.85

7 9 0.0058 1.2 11.8 1.2 8 23 548 563 548 563 0.98

8 9 1.4e-07 2.9e-05 26.2 1.4 1 23 569 591 569 591 0.99

9 9 1.7 3.5e+02 4.0 0.1 1 16 597 612 597 614 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.87	1.7e+02	4.9	1.6	1	21	157	177	157	178	0.93
2	9	0.00043	0.086	15.3	0.6	2	20	191	209	190	213	0.95
3	9	0.031	6.1	9.5	0.6	2	23	253	274	252	274	0.95
4	9	2.7	5.3e+02	3.4	0.9	3	21	282	300	281	301	0.93
5	9	1.8	3.6e+02	3.9	0.2	2	23	351	373	350	373	0.90
6	9	2.2	4.4e+02	3.6	0.1	1	14	378	391	378	394	0.85
7	9	0.0058	1.2	11.8	1.2	8	23	548	563	548	563	0.98
8	9	1.4e-07	2.9e-05	26.2	1.4	1	23	569	591	569	591	0.99
9	9	1.7	3.5e+02	4.0	0.1	1	16	597	612	597	614	0.84

Sequence Information

Coding Sequence: ATGGCTTCTACTCTAGAAACGGACGTAAAAATTGAAGAATTGTGTAGAACATGTTTGTGTTTGTCGAAGGATAATGAACTGTTCTCGATATTTGATGTATTTCTTGGCTCGGCAATTACTTTAGATTACATAGTAACTGCAACTACTGGGTTAaagGTAAGCAAAAATGATGGTTTGCCTTCAACAATTTGCTGCGAGTGTAAGGAAAAAGCAATACAGGCATTTGAGTTTAAGAAAAAATCGGAAGAAGCTAATATATCGCTCAGAGGGATAttattaaaaaaggaaaagaaagaaaactcAATGCCAATGAAAAATTTAAGTCAAACTAATACATCAGATGTGAAGACTGAAGATTTGTCATCACATGacaatgatgacgatgatgatatgATCTTCAATGATCCATACTTAAATGGACAAGAAGATGTTAAAATTGAGCATGGCGGCTCGGAACGCAAGTCGTGTTTTGTCTGTAAAAGCTGCTTAGTCGTTTTTGATACACACTGTAAATTGCAAGAACATGAGAAGATATGCATAAAAGTTGAGTGTGATGAAACTAACCGGACTTATTGCCCACTTTGCGGTACATGCTACAATGGTGCAGAAAATTTGACGAAACATATGTGGGAAAATCATGCAGACCTTATGGGCCCAAAAAAGAGAGGTAGACCTAAGAAGATGTTAACTAGTACCATTCTTAACAAGTTATCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAGTGCGCATTTTGCAAGCAACATTTTGAAACCAAAGAAGAATTAGGATCACATGCTTTATCTCACACAGATTCGAAAGTGCTGCTTTGTGTACTGTGCAAGAAAATATACATCGATAGGATAAAGTTTGATCACCATATCTGCATTGAAGAGAAAACTGATGTAAACAATGTAGGAAATGATTTGGCTAAAACAGACACAACTGCTAAAAGGCCTCAAAATTTACCGACAGAACTAACACTGCGAGAATTTCTAGAACCGAACATAGATATGgagcatatcAACTTGCTTGTTGTATGTAGTACTTGTAGCTGCATATTGCCGTCAGAAACGGATCTCATTAACCACCGTGACGCCGACCATCCGGAACTGTCTCACCGGTGCAACCTCTGCACTAAGAATAGTACACAAGCCGAACAAATTAATTACTACAAACTAACAGTTGAACTGGAACATACAAGTACGCTTAAGAAGAAACCCATTACAAAATCTAAGCTTGACTTTTTAAACATCGAAGAAAGTCACACTCAAAAGACTGAATTAAACATACCATCTAGCACACAAACGTGCAACAAATCACAATGTTCCACGGATGAAAAATTGATCTATGATAATCCAGAATCACCTAAATTGGTGTTATGTTCAGAAACAGAGGGCGCTACTGTGTCTCAAGTCATGCAGGATACAGCAAAAGGTATTGCTGAAAATGTTTTCCCAGAAAATAAAATCTGTCATTACTGTCTACCGAATGCAGGGATAATCGAACTCCTATCAGGGATCGAATTAAAACTTGTGGATTACACATTGAAAGATTATTGCATCATTATATTGGGTGAACGAGACTTTGCCGTCTCTAAAAACTATGAAACACTGGTAAATCACATTAAATGTTTTTCGCGCAGCAATAAGCTGTCCCGGCATATGCGCGTGCACACCGGCCAGCGTCCATACAAGTGCACGTACTGCGAGAAGGCGTTTTCGCAGAGCAACGACCTCAACCTGCATATCCGCCGCCACACCGGCGACCGCCCATACATCTGTGAAATCTGCGGCGACAGATTTATACAGGTttctaaattcaaattatttttatga
Protein Sequence: MASTLETDVKIEELCRTCLCLSKDNELFSIFDVFLGSAITLDYIVTATTGLKVSKNDGLPSTICCECKEKAIQAFEFKKKSEEANISLRGILLKKEKKENSMPMKNLSQTNTSDVKTEDLSSHDNDDDDDMIFNDPYLNGQEDVKIEHGGSERKSCFVCKSCLVVFDTHCKLQEHEKICIKVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECAFCKQHFETKEELGSHALSHTDSKVLLCVLCKKIYIDRIKFDHHICIEEKTDVNNVGNDLAKTDTTAKRPQNLPTELTLREFLEPNIDMEHINLLVVCSTCSCILPSETDLINHRDADHPELSHRCNLCTKNSTQAEQINYYKLTVELEHTSTLKKKPITKSKLDFLNIEESHTQKTELNIPSSTQTCNKSQCSTDEKLIYDNPESPKLVLCSETEGATVSQVMQDTAKGIAENVFPENKICHYCLPNAGIIELLSGIELKLVDYTLKDYCIIILGERDFAVSKNYETLVNHIKCFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEICGDRFIQVSKFKLFL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -