Basic Information

Insect: Xestia xanthographa
Gene Symbol: -
Assembly: GCA_905147715.1
Location: LR990644.1:8820596-8835215[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.4e-05 0.0088 18.4 1.3 1 23 286 309 286 309 0.96

2 9 0.054 11 8.7 4.1 2 23 317 338 316 338 0.95

3 9 0.3 60 6.4 4.6 3 23 371 391 370 391 0.93

4 9 0.0013 0.26 13.8 1.4 3 23 397 418 395 418 0.95

5 9 1.4 2.7e+02 4.3 0.6 2 19 432 449 431 452 0.90

6 9 0.00061 0.12 14.8 0.4 2 23 492 514 491 514 0.90

7 9 2.5 5e+02 3.5 0.2 1 23 527 548 527 551 0.74

8 9 1.1e-05 0.0023 20.3 2.6 1 23 554 576 554 576 0.99

9 9 0.00036 0.072 15.6 5.8 1 23 582 605 582 605 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.4e-05	0.0088	18.4	1.3	1	23	286	309	286	309	0.96
2	9	0.054	11	8.7	4.1	2	23	317	338	316	338	0.95
3	9	0.3	60	6.4	4.6	3	23	371	391	370	391	0.93
4	9	0.0013	0.26	13.8	1.4	3	23	397	418	395	418	0.95
5	9	1.4	2.7e+02	4.3	0.6	2	19	432	449	431	452	0.90
6	9	0.00061	0.12	14.8	0.4	2	23	492	514	491	514	0.90
7	9	2.5	5e+02	3.5	0.2	1	23	527	548	527	551	0.74
8	9	1.1e-05	0.0023	20.3	2.6	1	23	554	576	554	576	0.99
9	9	0.00036	0.072	15.6	5.8	1	23	582	605	582	605	0.98

Sequence Information

Coding Sequence: ATGGTAAATGAAAAAGATGGCTTACCGAACTACTTCTGTTACGAATGTGCTGCTATTCTGTACAAGTTTCATAAATTCAAGGAAAAATGCTGTACTGGAGAGAATATTCTCCAGGAGTTGCTATGGAGTGGTTCTATCACCTTATCATCAATTTCCCAAATAGACCGTCAAGACAAAAACCTACAATCGTCAATAGGCATTATAACAGTCAGCAAAAGAGTCAGAACACACATTTTTAAACACAAAACACTATCAAATGGTCCAACACATGAAATAGATATAAAAGAAGTAGAAATACCAGAACAAGAAATACCAGAAGTAGAAGAGTATACAATAAACTATTATAGTGACAGCTCATTGGATGATAAGAATCTAGCTGAGATAAAAAACGAAATGATTACTGAAAAGGACGGTTTTGAAGAAGATGAAAAACCAAACATTGATATTGAAGAAAGTACTGAAGACAAAGCAACACTTGATTTAGAAGATAATAGAAGGTttagtgatgatgaagatgtATGGCCAGATACTGCTAATGATGTTGATAAACCAACCGTCAAAGAAGAAATTAGCAATGAAATTACTgttaaagaaaaaacaaacttaAGTACTGAACTAGATATCTGTGACGACAaagtagtattaaataaaaataataaaggaaAGAAGAGAAAGAAAGCTAAATCAAATAAAGattcagtaaataaaaataaaaagagcaGAAAATTCGAAGTTGGTGGTAAAAAAAGTGATTACTTAGATCCTAAGCATTGGTTGAAGATCAATTTGACTGAAGAAGAAGCTTTGGAGGAGTTCAGAGCGAGAGCGGAAAGTCGGAAGTACGTGTCAGCGGCTTTTAAATGTTCTGATTGTTTTAAAGGCTTCTCTAAAGAGGATATGCTGAATAGGCATGTTAATTTGAGGCATATTGAGTCCCTAGGCCCAGTGGAGTGTCGCTTCTGCAAGATGCGCTTCAAGTTGAAGTGTTACCTAACTCGGCATATAACAGAACACTATTCTAAGTACAAATGCTTGAGATGTGACATCATTTGTCCTTTGAAGACTACAGCTGTATTTCACGACGAATATCACAATGGGGTAGTAAGAAAGTGCATACATTGTGGAGATGAATTCAGACATCTATCAACATACTACACTCACCTGCGCACGCATCGAAGCGAGCATTTGTGTACACTATGCGGAGCATCGTTTGTCAGTACAAAAGGACTCAATATGCATAAAAGGACCATGCATATAAATACCGTAGTTAACCCTGAAGAAGAAGTGAACACTTACTGCGAACGATGTGACGTCAAGTTTGAGACGCGGAAAGCTTATGATGAACATGTATTTCACTCAGCTAAGCATACTGAAGGAGTTGAggCGATGGCAGTCCTGGCATACGACATTCCTGCACCATCAATGCCGAAGCTAAGAAAAAAACTTCGCCGTAGACCACCTCAGCAAATCACTCCATGTACGATTTGTAACCGAGCCTTCCGAAGTCAGGCAGCTTACCTGAAACATCACGCGGCGGAGCACAAAGATAATCCTCTTCCTTCCAAAGAAGAGCAGAGACACATCTGTGAGATTTGTGGAGTTTCTCTAGCGGCCAACAGTGTGGCAAGTCATCTAAACACTCATACTCGGGAGAAGCTATACACTTGTTCGACGTGCGACATGCAGTTCAACAGTAAAAGCAGTATGACGAGACATCAACTGACACATACTGGTGAGAAGCCATTCGAATGCTCCATGTGCGAGAAACGGTTCACTCAGAAATGTAGCATGCAGCTACACTACCGCACCTTCCATCTCAAGGAGCCCTATCCTAAGAGAAACAGAAGAAAGAATGCTGGTATCCAGCAGGAAATAGAGGACTATAGAATACATGAAGATTCTGAAGAAAACCCGAAAGTGTATACAGGATGA
Protein Sequence: MVNEKDGLPNYFCYECAAILYKFHKFKEKCCTGENILQELLWSGSITLSSISQIDRQDKNLQSSIGIITVSKRVRTHIFKHKTLSNGPTHEIDIKEVEIPEQEIPEVEEYTINYYSDSSLDDKNLAEIKNEMITEKDGFEEDEKPNIDIEESTEDKATLDLEDNRRFSDDEDVWPDTANDVDKPTVKEEISNEITVKEKTNLSTELDICDDKVVLNKNNKGKKRKKAKSNKDSVNKNKKSRKFEVGGKKSDYLDPKHWLKINLTEEEALEEFRARAESRKYVSAAFKCSDCFKGFSKEDMLNRHVNLRHIESLGPVECRFCKMRFKLKCYLTRHITEHYSKYKCLRCDIICPLKTTAVFHDEYHNGVVRKCIHCGDEFRHLSTYYTHLRTHRSEHLCTLCGASFVSTKGLNMHKRTMHINTVVNPEEEVNTYCERCDVKFETRKAYDEHVFHSAKHTEGVEAMAVLAYDIPAPSMPKLRKKLRRRPPQQITPCTICNRAFRSQAAYLKHHAAEHKDNPLPSKEEQRHICEICGVSLAANSVASHLNTHTREKLYTCSTCDMQFNSKSSMTRHQLTHTGEKPFECSMCEKRFTQKCSMQLHYRTFHLKEPYPKRNRRKNAGIQQEIEDYRIHEDSEENPKVYTG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00445617;
90% Identity: iTF_01534343;
80% Identity: -