Basic Information

Insect: Xestia xanthographa
Gene Symbol: -
Assembly: GCA_905147715.1
Location: LR990654.1:4126253-4158990[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.3 2.5e+02 4.4 0.9 1 23 324 347 324 347 0.94

2 12 1.8 3.6e+02 3.9 1.1 1 23 355 377 355 377 0.94

3 12 0.48 95 5.7 1.8 1 23 381 403 381 403 0.95

4 12 5.5e-05 0.011 18.1 0.4 1 20 410 429 410 431 0.94

5 12 0.0057 1.1 11.8 1.0 2 21 438 457 438 458 0.92

6 12 0.00019 0.039 16.4 0.6 2 23 474 495 473 495 0.94

7 12 3.2e-05 0.0064 18.8 0.2 1 23 500 522 500 522 0.98

8 12 0.0022 0.45 13.1 4.0 1 21 531 551 531 556 0.93

9 12 3e-05 0.006 18.9 2.3 1 23 564 587 564 587 0.93

10 12 0.0062 1.2 11.7 0.4 1 23 593 616 593 616 0.94

11 12 0.021 4.2 10.0 0.3 3 19 629 645 627 646 0.89

12 12 0.043 8.6 9.0 0.9 1 23 659 682 659 682 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.3	2.5e+02	4.4	0.9	1	23	324	347	324	347	0.94
2	12	1.8	3.6e+02	3.9	1.1	1	23	355	377	355	377	0.94
3	12	0.48	95	5.7	1.8	1	23	381	403	381	403	0.95
4	12	5.5e-05	0.011	18.1	0.4	1	20	410	429	410	431	0.94
5	12	0.0057	1.1	11.8	1.0	2	21	438	457	438	458	0.92
6	12	0.00019	0.039	16.4	0.6	2	23	474	495	473	495	0.94
7	12	3.2e-05	0.0064	18.8	0.2	1	23	500	522	500	522	0.98
8	12	0.0022	0.45	13.1	4.0	1	21	531	551	531	556	0.93
9	12	3e-05	0.006	18.9	2.3	1	23	564	587	564	587	0.93
10	12	0.0062	1.2	11.7	0.4	1	23	593	616	593	616	0.94
11	12	0.021	4.2	10.0	0.3	3	19	629	645	627	646	0.89
12	12	0.043	8.6	9.0	0.9	1	23	659	682	659	682	0.97

Sequence Information

Coding Sequence: ATGAAGGAAGTTAACATAAATATTGAAGGCTATAACGTAAACGGAATATGTGTTGGCTGCTTGAATTACAATCGTCGTATGTTTTACCATCCTACCGTGAAAGAAATTTTTCGTTTGCTCGGAAATATTGATGTGCCAGACGGACTAGAAGTCCAGGTGTGCTGGGAATGCCTGGCGCGAGTCAAATCTGCCATCAACTTTAAGGAGCAAATACTCAAGTCTTATGACTTTCTCATCTCGTACTCAAAAGAGCACACATTCCTGGACTCTCCAACGGACTTCGAGCCATACGCCACTCTCAACATAGACAGGACCGAGGTGGAGTCCTACGAGTGTCTGCCGGAGACGGTCGCAGTTGAGGACGAAGTGAAAGAATTCGATGTCAAAGAGGAAGACGACAATAATGAGGAGAAGTACGCTTTCGACGCGGTGGCGGACGAGGAGATAGACGCGGTGGCGGACGAGGAGATAGACGCGATGGCGGACGAGGAGATAGAGATCGATGTTAAAGAGGAAGACGACAGCGAGGAGAAGTATGCTTTCGAGACGGACGTGGTGGCGGACGAGGATAGAGAGATCGATTTCAAAGAGGAAGACGACAGCGAGGAGAAGTATGCTTTCGAGGTGGCAGTAAAGGAAGAAACAATTGACGATCCATACTTCGAAGATATACCAGCTATAGACGACGGTGTCACTTCAGATGAAGATGTGCAGCTTTCTAAACTGAAAGAGAAAGAGACGGAGAAAGTCAAGAAGAAACGGAAAAGTGGGAGGAAGAAAGACAAGGATAGAGATAGGATCAACTCCCCAAAACGCCAGAAGACCAAAAAGGACAAAAACCCCGAGAAGAAGAGTAGGAAGCTAAAGAATCTCCCAGAAGACTTAGTAGAGTTGTACACTATGAGTAAAGAAGATATGTGGGGGATCAGGATCGAGGACCTGAACAGCAAGGAATTTCAGAAGCTGAAGTTTAGGTGTGATAATTGCATCATTGCCTTTAACACTGAGAAGTTGATGCATGATCATCTGAATGGAAAACATCAACCAAAAACTGAAGACTGCCACCAATGCTTTATCTGCCAGGCCTACTTCCTGACGAAAGACAACGTTGCCTCTCACAAGGCGCTGCACCAACAAGGATACAGGTGTCGCCAGTGCGGGTTCAGTACCACCCTCAAGCGGCGCATGCTCAAACATGTAGTGAGTCATGCGCCTGATGGAGACGCGCATGTGTGTCCCACTTGTGGAGCTACGTTTAGTACTAAATCGAAGCTAACATACCACCGCGGCGTCTGTCGTCAAGAGAGGCCGCAGTGTGACTGCTGCGGGAAAGTGTTCGCCAACAAAATGACGCTCAAGTATCATctcaaAATCCTGCCTCAGAATAAAGACGATAAGCCCAAAGAGAAGCTGTACATACCGTGCAAGGGGTGCGACAAGGTGTTCCATTCTAAGAAGAGCTATAGAGCGCATGTTGTCATTCACAACGGCCTCACCTACCCGTGCCCTATCTGCGGCAAGATGTTCCAGTGGAAGCGCAACCTGGCGCGACACGCGCGCAACCATCGGGAACGGGAAGCGGGCAACCTGCACGAGTGTCGCGCCTGCGGCAAGACCTTCGCCAGCAGGGACTGTTATAACAACCATATGCGGCTCAGTAAGCGGCATGTGTCGCAGGATACCTACCAACACGAATGCAACTATTGCGGAAAGAAATTCGCGACAAAATGGTGTCTTACCGACCACATTGATTGGGATCATTTGAAGAGAATCAAGTACCAATGCAGTTTCTGTTTTAAGGCATTCAAAACAGCTAAGATATTGGTAGCTCATGTCAATAATATACACGAAGTTAAGAAGAAAGAAGCCGAGGGTGAACATCTGTGTGAAATATGCGGGAAATCGTACAGGACAGTGAAACGGCTGAAAGGCCACGTGTGGGCCATGCACACGAAGCGGTCCCACAGCAAGGTGTATAAGTGCAAGCTGTGTCCGGCGACCTTCATGTGGCAGACCAGCATCTACAAGCACATGAAGATGATGCACGACTCCAATAAGAAGACTAAGTCACCTCGCGCCGTCCCCCCTCCTCCTATGAAGAAAGAAGAACcctacccgggaatcgaactagCGAACCGCATGCAGTACTTCCAACAGAATATCAGTGGCAACCTAAATATAGTTCACATACAACCCTTAGGAATCGCTCAAAATATTGTCTAA
Protein Sequence: MKEVNINIEGYNVNGICVGCLNYNRRMFYHPTVKEIFRLLGNIDVPDGLEVQVCWECLARVKSAINFKEQILKSYDFLISYSKEHTFLDSPTDFEPYATLNIDRTEVESYECLPETVAVEDEVKEFDVKEEDDNNEEKYAFDAVADEEIDAVADEEIDAMADEEIEIDVKEEDDSEEKYAFETDVVADEDREIDFKEEDDSEEKYAFEVAVKEETIDDPYFEDIPAIDDGVTSDEDVQLSKLKEKETEKVKKKRKSGRKKDKDRDRINSPKRQKTKKDKNPEKKSRKLKNLPEDLVELYTMSKEDMWGIRIEDLNSKEFQKLKFRCDNCIIAFNTEKLMHDHLNGKHQPKTEDCHQCFICQAYFLTKDNVASHKALHQQGYRCRQCGFSTTLKRRMLKHVVSHAPDGDAHVCPTCGATFSTKSKLTYHRGVCRQERPQCDCCGKVFANKMTLKYHLKILPQNKDDKPKEKLYIPCKGCDKVFHSKKSYRAHVVIHNGLTYPCPICGKMFQWKRNLARHARNHREREAGNLHECRACGKTFASRDCYNNHMRLSKRHVSQDTYQHECNYCGKKFATKWCLTDHIDWDHLKRIKYQCSFCFKAFKTAKILVAHVNNIHEVKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRSHSKVYKCKLCPATFMWQTSIYKHMKMMHDSNKKTKSPRAVPPPPMKKEEPYPGIELANRMQYFQQNISGNLNIVHIQPLGIAQNIV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01063169;
90% Identity: -
80% Identity: -