Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_905147715.1
Location
LR990647.1:4322325-4329412[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-06 0.0094 18.0 0.0 2 31 293 326 292 343 0.86
2 2 1.4e-10 5.1e-07 31.7 0.1 2 43 374 420 373 422 0.87

Sequence Information

Coding Sequence
ATGCGGTGGTGTTTATTCACTTTGTGTACGCTCATTTTGGGCACAAAAGCGTGGGATGACGGTGACTTGGAAGTGTTCGACGTGGTCGAAGAAGTTAATCAGAACTTTTACGAATTGTTAGGTGTAAAACAGGATGCAACCCCAGCTGAAGTCAAGTCTGCATTTAAGAAGCTCACACTGAAACTCCACCCGGATAAGAATGACTCTCCCGATGCAGATGTACAGTTCAGGAACCTGGTGTCGGTACACAACATACTCAAGGATCCTGGGAAAAGGGAAAAGTACAATGAGGTGCTCAAGAATGGTCTTCCGAACTGGCGCTCAGCCATATACTACTACCGTCACGTGAGAAAGATGGGCCTGGCAGAGGGCGCCATCATCCTGTTCGTCATCATCACCTTCGGGCAGTATGCTGTAGGCTGGGCTGCATATGCTGAGAAGAGGTTTACTGCCGAACAAATACTCACCAGTAGAGGCAAAAAACACTCCAAGCGGGCCGGTTTTGACCAAGGCTTGTCAGACATTTTAGACCAGCTGCCCAAACCCAGTGTTAAAGATACTTTGCCGTTCCAAATACCGAGGTTTGCCTGGTGGCTGGTGACTGCCATACCTTACGGTATCATAGAGCTTAGGAGAAGGATGAAGGAGCAGGAAGAAGAAGCTAAGAGACAGAAAAAGAGGGAAGAAGAAGATAGAGCGCGTGCAGACCGCGAGGCGGCCGCAGCGGCGGAGTACAAGGCGGCCGGCGTGCGCAAGCGCCGCGGGTTCGTGCCGCCCGTGCGGGAGGCGGACTGTCTGCTGGACCCGGGGGACGAGCCCGATGGAGGACCTGTGGTAGTGGCTGTTAGACAGCCCGCCGCCCCAGTGATAACAGGCGGTCTCTGGACAGACGACGACCTGGCGGAGCTGGTGCGCCTCGTGAAGAAGTACCCGGGGGGCTCCGCCGAGCGCTGGGAGCGCATCGCGGAGGCCATGTGCCGCAGTGTGCCGGAAGTGACGCACATGGCCGCCAAGATGAAGGAGAACTGCTACAAGGTACCCGGTCAGGAGCCGGACCAGCCTGTGCTCGTGGAGCCGCCAAAGAAGGTAAAAACGCGCAAGCCAGAGGAGACGAGTGGCGGCAACTGGTCGCAGACGCAACAGAAGGCGCTGGAGAACGCGCTCGCCAAGCACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATAGCCAACACTGTGCCCGGGAAGACCAAAGAGGAATGCATGCAAAGGTGTAAATATCTATCAGATATGGTCAGAAAACAGAAACagaaggaagaagaagaagcacaACAGAACGCAGAAGGTGATGTTGTCACAGAAGATCAACAAGACGAAGAGTGA
Protein Sequence
MRWCLFTLCTLILGTKAWDDGDLEVFDVVEEVNQNFYELLGVKQDATPAEVKSAFKKLTLKLHPDKNDSPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGAIILFVIITFGQYAVGWAAYAEKRFTAEQILTSRGKKHSKRAGFDQGLSDILDQLPKPSVKDTLPFQIPRFAWWLVTAIPYGIIELRRRMKEQEEEAKRQKKREEEDRARADREAAAAAEYKAAGVRKRRGFVPPVREADCLLDPGDEPDGGPVVVAVRQPAAPVITGGLWTDDDLAELVRLVKKYPGGSAERWERIAEAMCRSVPEVTHMAAKMKENCYKVPGQEPDQPVLVEPPKKVKTRKPEETSGGNWSQTQQKALENALAKHPKGGAGDRWQKIANTVPGKTKEECMQRCKYLSDMVRKQKQKEEEEAQQNAEGDVVTEDQQDEE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01075387;
90% Identity
iTF_00810014;
80% Identity
-