Xxan007221.1
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- -
- Assembly
- GCA_905147715.1
- Location
- LR990643.1:6707579-6709985[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-07 0.00022 22.9 0.0 1 40 14 53 14 57 0.90 2 2 5.8 6.6e+03 -1.1 0.0 24 33 211 220 211 222 0.80
Sequence Information
- Coding Sequence
- ATGCCCAGGCattataagaaaaaaactaaCCGCACATTTTCTCCTGAGGCACTAAGAAAAGCCGTAATAGATGTACGATCCAAAAAATTTAGCATCAGGAAGAGTGCGGCTGAGCATGGTGTTAGCAAATCAAGacttttagattgttttaaaaaGAATAAAGGACTAAAGATTTATAATCTGGATGAAACCGGGATAACCACAGTGCAGCGTGTTTCAAAAGTCATTGCTCAAAAAGGGCAACATCAAGTAGGACAAGTGACCTCGCGAGAAAGAGGAGAGCTGGTAACACAGATGATGCAAGGTATTCCAGATACTGCAGGTCTTGGTTTGGTTTACCCTTCTGGCTGGATGAAAAGTGAAAATTTTTTGAAGGTGTTGGAATATTTTGCTCGGAATGTGCGTTGTTCTATAGAAAACAAGGTCTTGTTAATCATGGACAACCATGAATCCCATCTATCAGTGGATGGATTAAATTTCTGCAAAACAAATGGGATCTTCATTCTTACCCTGCCACCACACACGTCAAATAAGCTGCAACCACTGGATCGCACTGTGTTTGGGCCATTTAAGACTTTTTACAACAGTGGTTTGGATTCATGGATGTTAGCACACCCTGGGCAAACTATTAGCATTTATGACATCCCACAAATTAGTCTTCTAGCTTGGGATAGAGCTGCCAATCCTATGAATGTAAAATCTGGTTTCAGATGTATTGGTATTTGGCCCTTTGATAGAAATATATTTACGGATGTAGATTTCTTATCATCCTATGTGACAGATCGACCGGGGACTGATCAATCTAATGTTCGTTCACAATCTCAAAACAGTGATGATGAATGTGTCTCACCTTCAGTGATTGGACAACTGTTCGCATCAGATTGGTTGGATGATGATGGCAATGATGCACAAACACTAGCGATTCCTACAGTTTACAGGACCCCATCAAGAACCCCATCAATTTCCTCAGTTCATAGTGCTGATGATGAGTCATCAGATGAGTCAACAGACCAACACATTTCTTCTAATGGCAGTACATACGACATTGATGATGAAGAATTAGATGACAACAATGCTGATACTTCTAATGTGCCTGAAGGGAGGTGGTTAAATGTCGAGTTTTATAAAAGGAAAATGCCTTCTAATAGATTTATACGAACGAATGAAGAAGAAGCATTCGTCACCTATGAGTATGTAGTGCTCGTATTGCCAGTTCCCTCAGAAGACAAGAGGCCTCGCTTTCACGATATATTCATGATATATTTCCATTGCAATTTGGATGAGTACCAACTACAgtag
- Protein Sequence
- MPRHYKKKTNRTFSPEALRKAVIDVRSKKFSIRKSAAEHGVSKSRLLDCFKKNKGLKIYNLDETGITTVQRVSKVIAQKGQHQVGQVTSRERGELVTQMMQGIPDTAGLGLVYPSGWMKSENFLKVLEYFARNVRCSIENKVLLIMDNHESHLSVDGLNFCKTNGIFILTLPPHTSNKLQPLDRTVFGPFKTFYNSGLDSWMLAHPGQTISIYDIPQISLLAWDRAANPMNVKSGFRCIGIWPFDRNIFTDVDFLSSYVTDRPGTDQSNVRSQSQNSDDECVSPSVIGQLFASDWLDDDGNDAQTLAIPTVYRTPSRTPSISSVHSADDESSDESTDQHISSNGSTYDIDDEELDDNNADTSNVPEGRWLNVEFYKRKMPSNRFIRTNEEEAFVTYEYVVLVLPVPSEDKRPRFHDIFMIYFHCNLDEYQLQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -