Xxan011900.1
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- TIGD1
- Assembly
- GCA_905147715.1
- Location
- LR990644.1:23331954-23333414[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-08 3.7e-05 25.3 0.0 2 45 11 54 10 54 0.96
Sequence Information
- Coding Sequence
- atgataaaaagaaaatattattctTGGAGTAGAGAAGATATGGAAGAAGCGATTAGAAAATATAACAATGGGGACTTAAAATTCAACGAAGTTTGTCGTGTATTTAAAATACCGAAACCGACATTTAGACGACATTTAAAAGGCTTGAATACACGAAAAAGAATTGGACGTCCGAGTGATTTAACGGAGGAAATGGAAGCAGAACTAGTCAGACATGTTCTTTTGTTGGAGTCTAGATTTTTCGGCTTGACCATTACCGATTTACGGCGCTTAGCTTATCAGTTAGCAGAAAAATACGGACTGAAACACAGATTCAATAATGAATCGCAACTAGCTGGTTGGAAATGGTATTATACATTTATGAAGAATCATCCAGAAATATCCTTACGAACCCCAGAACCCACGTCTATGGCTCGCTGTAAAGGATTCAACAAAGAAACGGTGATGGCGTTCTTCGACAAATATGAGTCCATCTTAGATGAAGGTCAATTTACAGCCGAAAAAATTTATAATATGGATGAGACAGGTCTGAGCACAGTTCATAAGCCTTCAAAAATTTTGGCTCAAAAAGGGAAACACCAGGTTGGAGCTGTCACTAGCGGTGAACGTGGTGTTAACACAACATGCATTTGTTGTATGAACGCAGCTGGAGAATTTGTGCCTCCCATGCTTATATTTAAACGTAAAAGGATGACAGAGAGCTTGACGCGTGGAGGGCCACCGAATACCTTGTATGATTGTTCAGAAAGCGGATGGATTGTCAGCACCTTATTTACCAAATGGcttaaacattttataaaatgtcTAAGACTGCAAAAATCACAAGAAAATCAAATTCTTCTCATCCTAGATGGCCATTCGACGCACACGAAGAACATTGATGCAATTAATCTCGCTAGGGACTATGGAATAATTATGTTATCTCTTCCGGCCCATACCACACACAAGTTGCAACCATTAGATAggtcatttttcaaaactctaaAACAGAATTTTAACGCTGCTTGCGTGTCGTGGATGCGAAACCATCCTGGATCTgtcataaaacaaacaaatgctGTAGAAATTTTGAAAGAAGCTTATCTTCGAGCAGTTTGTATGGAAACAGGAATACATGGCTTCGAATGTTCCGGTTTATGGCCTTGCAATCGCTATAAGATCAGGGATGAAGAATATGTCGTACTTGAAGAAGCTAATCTAAGTCTTCCAGAATCTCCTCGCTCTGAATTGGCTGAAGTCTCCCAGAATTTAACAACTGAAATACAACGAGAACAAACAAAGGCTTTCACGGGTGTGCCAAAACCTAATGAGATTTCTGTGCAAGAACAGACTGAGGAAGCTACGTCCCCAAATCTTCCTGAGGTATCGAGAATCCACCCTTTGGTACAGCAAGATCAACGTCTAGAAGAAAGAATATTCTTCAGATACAAAAGTAGAGAATTTTACAGCACAGTCAGTTAG
- Protein Sequence
- MIKRKYYSWSREDMEEAIRKYNNGDLKFNEVCRVFKIPKPTFRRHLKGLNTRKRIGRPSDLTEEMEAELVRHVLLLESRFFGLTITDLRRLAYQLAEKYGLKHRFNNESQLAGWKWYYTFMKNHPEISLRTPEPTSMARCKGFNKETVMAFFDKYESILDEGQFTAEKIYNMDETGLSTVHKPSKILAQKGKHQVGAVTSGERGVNTTCICCMNAAGEFVPPMLIFKRKRMTESLTRGGPPNTLYDCSESGWIVSTLFTKWLKHFIKCLRLQKSQENQILLILDGHSTHTKNIDAINLARDYGIIMLSLPAHTTHKLQPLDRSFFKTLKQNFNAACVSWMRNHPGSVIKQTNAVEILKEAYLRAVCMETGIHGFECSGLWPCNRYKIRDEEYVVLEEANLSLPESPRSELAEVSQNLTTEIQREQTKAFTGVPKPNEISVQEQTEEATSPNLPEVSRIHPLVQQDQRLEERIFFRYKSREFYSTVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00120449; iTF_00851728; iTF_00449019;
- 90% Identity
- iTF_00449019;
- 80% Identity
- -