Xxan066192.1
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- -
- Assembly
- GCA_905147715.1
- Location
- LR990671.1:8322591-8323031[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-08 3.6e-05 25.4 0.0 4 37 16 49 13 56 0.85 2 2 6.6 7.5e+03 -1.3 0.0 16 23 129 136 126 136 0.78
Sequence Information
- Coding Sequence
- ATGGCGCCAACTGGGAAAAAACCTCGAGGCCAGTGGTCAGAATGTCAGCTAAAAAATGCCATAAAGGCAGTAAAGAGACGTGAAATGTCACAACGAGCAGCTGCTGAAGCATTTTGTATCCCAAGGCGTACATTGCGAAACCACTTATTATCCGGAAACACAGAAAAGATAACTGGTAGACCACCTATTCTGAATAAAAAACATGAACAGGACTTAGCAAAACGGATAATAAGACTTGCTCACGTAGGTATGCCGCTGACCCTCAAACTTGTTCGGAAACAAGCGTACGAGTTCTGTAGAGCAAATGGCATATCAAACATGTTCagtgaaaaaacaaatattgcaggGAAGAAATGGCTGAAAGGTTTCCTCAAACGCAACTCGGAGATATCACTTCGTAAAGCTCAGTTTATGAATCCCAGCAGAGCACATAAAACTTAA
- Protein Sequence
- MAPTGKKPRGQWSECQLKNAIKAVKRREMSQRAAAEAFCIPRRTLRNHLLSGNTEKITGRPPILNKKHEQDLAKRIIRLAHVGMPLTLKLVRKQAYEFCRANGISNMFSEKTNIAGKKWLKGFLKRNSEISLRKAQFMNPSRAHKT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01534759;
- 90% Identity
- iTF_01534759;
- 80% Identity
- -