Xxan016348.1
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- -
- Assembly
- GCA_905147715.1
- Location
- LR990646.1:12911867-12912250[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-11 7e-08 34.1 0.0 1 37 10 45 10 52 0.90
Sequence Information
- Coding Sequence
- ATGTCTAAGAGACCAATCCATCAATATAAAGAAGAACAATTGGCAGAGGCTATGGCGGCGATTAGAAAAGGGATGAAAACTAGAGAAGCCAGTCGAGTTTTTAAAGTTCCGCGAGGAACGTTACAGGATCGAGTACATTTAAGGGTTCCAGATTTGCCCCGTAAAATGGGACCGGATTCAGTGCTGACCAAAACTGAAGAAACTGCATTGAAAGACTGGTGTATAGCATTAGCGCAATGTGGCTTCCCATTAAAACGTGATGATCTCCTCAATACCGTCCATAATATTATATCTGAAGATaaaataccaaacccatttgtAAATAATAGACCAGGGAAGAAATGGTACCATTCATTTCTGAGACGAAATCCCGAGTTTAAGTGA
- Protein Sequence
- MSKRPIHQYKEEQLAEAMAAIRKGMKTREASRVFKVPRGTLQDRVHLRVPDLPRKMGPDSVLTKTEETALKDWCIALAQCGFPLKRDDLLNTVHNIISEDKIPNPFVNNRPGKKWYHSFLRRNPEFK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246771; iTF_00771833;
- 90% Identity
- iTF_01246771;
- 80% Identity
- -