Basic Information

Gene Symbol
-
Assembly
GCA_905147715.1
Location
LR990671.1:1552997-1588008[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 0.0017 13 8.2 24.1 4 85 1380 1448 1377 1927 0.96

Sequence Information

Coding Sequence
ATGTGTCTGACTTTGGAAGGTGGAGCGATTACCCATGTACGGGCTTGTAAAACTGCAAAGGAGGTCTGGGACGCCTTAGCAAATGCCTATGAGGATAAAGGTATGGGTAGGAAGTTGGCGTTAGAACGAAAGCTGTATAGATATCAATTACTTGATTTTGGTTCGATTGAAGACTATATCAATGCTGTCATTAGCACTGCTCAGGACTTGGCAGATATAGGGCGACACATTGATGATATGTCTATAGGAGCAATTTTACTTGGAGGTTTACCACCAGAGTTTGACCCCTTAGTAATGGCCCTGGAGAACTCAAATATTCAAGTAACATCTGAATTAGTAAAACAGAAATTACTAAACGAAAGCGCCAAACGAGAGTCAAAGGAATTGGTTCTTGcaacaaatgaaaaaatgaaGCCGCTTAAAGCTGCAGAAAGAAAAGTTATTTGTTACGAATGTAAAGAACCGGGACACAAACGTCCAGATTGCCCAACCAGGAAGAAAGGAAAACAGAAAAGGCagagaaaaagtaaaaataacagtAAGGAGACAACACTTATTTCGGCCTTGGGTGTTGGAGGTAATCTAGTTCAAACCGACTGGTATGTGGATTCTGGAGCCTCTTCACATATGTCCTGTATGAAAGAATTGTTTACCAATTTAAACATGTCTGAAAGCAAGAACATAACTCTAGCAAACAATAGAGAGATAATTTCAGCTGGCGTCGGTGAAGTGTTACTTGTAAAAGAcagtaagttaaaattaaatggtATCAAAGATGTTCTTTACGTTCCTGAGTTACGTACGAACTTAATTTCAGTTAGTAAGGCTGTTGAAAAGGGTTTAACTATTGTTTTTGATAAGAAAGGTTGTTCTATGTACAGACGCAATGAGGTAAAAGTAGTCGGAAAATCAGTAGGTCATGCGACATGCAACGTTGGTGGTTTGTATAGATTGGATCATCAAGTAATTCACTCGGAGCATGCTATGGCTTCTAAAGAACACACTACTTCAAGTTTGTGGCATCGGCAACTTGGTCATCTGTGCCGCGTTGCATTAGAACATCTACGTCATGGCAAAGCTAAAGGTATTGAAtattcttctttagataaaacCCCTTGTATAGCCTGTATTGAAGGAAAACAAAGTAGAAAACCCTTCAAAACTATTGATTATAAGAAAGGCAGCAGAATTTTAGAAACTATACATTCTGATGTCTGTGGCCCTTTTGACGTAATGTCATTAGGTTCAAATCGGTATTTGGTTACTTTTATAGACGATTTTTCTAGAATGattttttcttactttataCCGTCTAAAGCGCATGTTAAGAAAATGTTTTTAGAATTCGAAGCTCTGGTTGAAAGGGAAACTTCTTTCAAGATAAGAAACTTGCGTACCGACAACGGGGGTGAGTATGTTAATGGTGAATTCGAAGCATATTTAACTTCAAGGGGAATTAAGCATCAGACTACTGTCCCGTATTGTCCTGAATCCAACGGTGTCGCTGAAAGGACAAATAGGTCCTTAGTGGAGAAAGCTAGGTGCATGTTACAAGATAGTAACCTACCAAAGACTTTCTGGGAAGATGCGGTACGCACTGCTACTTATTTGAAAAATAGATGTCCACATAGAGCTTTAGATAATCGTACTCCGTATGAGATATGGTTCAACAGAAAACCCGATATCTGCCATCTACGAATATTTGGTTGCCGTGCATACGTTCATGTGCCGTCTTGCGATCGCCAAAAATTAGATGCGAAAGCGAAACAGTACATATTTGTTGGTTATTGCGATGACAACAAGTCGTATAGGTTTCGTGATCCCACCAATATAAGAAAAAGTATCAAAGGGCGGGATGTAGTGTTTTTAGAGAATTGTTTCACAAACGCTGAGATAGGGGACGAGTCACATCGTCATAGCATTATTCTCTCCTCtgataacaataatttacaggTACAAAGTGGGTCAGCTGATCCTGTAGCAAGTACAAGCACTGCTGCTGCTGAACCATCCCTATCTATGGCCTATCCTCTTCCTGAAACTCCAGTAGTACCTGTTGAGGAAGAAGAGACGCACATGGAACCTGAAAGGAGGTACAAATTAAGGGATAGAAAGCCTGTAAATTACTGTTCCGTTTGTTGTTGTTCAGCGATGCAAAGTGGTGAGTTGAAAGATGAACCTTGTTCTTATTCTGATTCTCTTTTACGTCCAGACAAGGACATGTGGATTGCTGCAATGGAAGACGAATATAATTCCTTAATTTCTAACGGTACTTGGACCTTAGTAGAAAACACAGGACAAAAAATTATACCGTGTAAATGGGTATATAAGTTAAAACGTGATTCTGAAGGTAAAGTGAGTAGATACAAAGCACGTTTAGTCGCAAAAGGTTTTCGTCAAAGCTACGGAATAGATTACGAGGAAACTTTTTCGCCGGTGGTTCGTTACTCGTCGTTAAGGGTTTTGATTGCACTAGCCACTGAACAGAATTTAAAAATGCATCATTTAGACATAGACACAGCTTTCCTTCACGGAAAACTGGAGGAGAAGGTTTTTATGGCACAACCTGAAGGTTTTGTAGCTGAAGGTCAGGAGACCAAAGTATGTCAATTACATAAGTCTCTTTATGGTCTTAAACAGGCTACCAGAGCCTGGAACAAAAGGTTAGATGAGGTGCttcataatttaggctataatAGATTAGAGTCTGAGCCCTGCGTCTACATAAAAAGGAGTAATAGTATCGCTATACTAGCAGTTTACGTAGacgatttgatcttgatttataataaagaaaatgaattGTCTTTCTTGAAGAACGGCCTAAAGGATTTTTTTGGTGTCAAGGATCTAGGTGAACTTAGTTATTGCCTTGGTTTGCATGTCGTTAGGGAAAAGGGAACTAATGATGTAAAGGTAAATCGGAATCGTTACATATTAGAAATGTTGGACCGTTTTAATATGGCGGAGTGCAAAACTGTTCCTACTCCTATGGACATTAGTGTTGACCTGCGTTCTCAGACTGAACCAGCTGTCAATGCCCCTTACCAAAACTTAATCGGTTGCTTGATGTTTTTAGCTATCAATACAAGACCCGACATTTTGTTTGCCGTTAATTTCTTAAGTCAGTTCAATAAGAATCCTATGCAGGCGCATTGGACTGCTGCTAAACGTGTCCTGCAGTATTTAAAAGGTACGTTGGACTACGGTCTTACATTTAAAAGGACTGGAGAACCCTTACGTGGTTTTGTCGATGCCGACTGGGCCAACGGTGGTGACAGGAGATCGTATACAGGTTACGTATTCAAATTAGCGAATGCACCAGTATCGTGGGAGTGTAAAAAACAACCCACGGTTGCCTTGTCGTCCACAGAGGCTGAGTACATGGCGTTGTCCAGTGCTTCTAAAGAAGCTGTTTATTTACAGCGTCTTATATCTGAGATAACAGGTGAGTCTTTTCCGGACGAGGTCTTAGCCATCAACGAGAAGGTAGTCCTCCGAGCCGACGACCTGCTCTCCTGGATGTGCGTGGGCACGGAGTGGCGCTGGGGGCTCCGGGCGGTGTGGCGCGGCGCCTGCGCCCCCCCTGCCGACATGCCGAGGCACGCACCGCTTACTCACACCAAGTTAGACTTCAGTGATGTGGACACCGAGAAGAGTGCTATTGTGGTAGATGCAGCTGCGCCAGGCGTTGTGGTCTTCTCATACCCTCGGTACTGCCGCTACAGGGCGCTCATAGCCAGGCTTGAAGGCATCCAGGCTTCCTGGCTGAGAGACTCCTTGGTCGCAGCCCTGGGAGGGTACGCGGCGCCGACCAGTAACACCAGGATACTGTACTGTAAGGACACATTCGAGTACCCCGAGCTAGAAGGTCACGAGTTCGTGTGCAACCACCTGGCCCCGCGGCTGAAGGGCAGGCCGCGCGGGCGCCGGCGTCGTGCGCACTCGCCCGACCTGTCGCACGCGCACCTGGAGCCCGGCTCCGACCGGTCAGACTCGGACGACCCGCCAGCTTCCGGGCCCGCTGGTAGTGACCCGCCGACCCCCCGGCGCCTGTCGCTCCGCAACGGCGCGCCCCCCCCCAGCGACGAGGAGGACGAGGAGTACCGGCGCCTGGAGCAGTCCCCGGAGGACCGCGTCTTCCTGCAGCAGCTCAAGCTGTTCTACAAGACCAGGAGTGAGCCCTTCAGGAGCGGACACACGCTCAAGCATTTATCTCTCCGCGCGCTGTACCTGTCGGTGGTGTCTCGCGGAGGGTACGAGGCGGTGTGCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGGTATGTTACCCGACACAAGCTGTGGCGGGCACTAGCGCGGGACCAGCCCGCCCGGACCCGCAGGCACTACGAGAGATTCCTCCTGCCCTTTGAGAACCACGAGCGACGCAACGGCACCTCCCTCTCATTCAAGTTGAACGGGAAGCTAGACGCCGAACCGCGAACCATCGCCACCATCGACGTCACAGACTCCCCCAGACGAGATGACGACGACAAGATCCTCCGCACCCCCTCACCTACCCCCAAACTCGACAACATCGACTGTGAGACGGGAGAAATAACTACCAAAGATGATATCGTTATCAAAAATGCTGAAGAGCTTAATCGGGAGTTCTTAGACTCGCTGCCCAAAGAGGAGAAGTTGGTCAAGATATCCGTGAAGCCGGTCGAGAAGCTTATTGAACCGGGTCGTGGTGAGGGTCTACCGAAGGTGGAGCAGAAAGATGAGAGGGATTTTAGTCAGAATTATTTGGGGGATTTGCAGAAATTTAGTATGGGAGCGGAGTCTCTCTCGTGTCGAGCGACGCCTCTCAACGGTCACGCGGCGCCTGCGCCGACAGATCTTAAGTCGTCGGCCCCCCGCCCCCTGGGCCGCAGCTCGCTGCGCGCCGTGCGCGTCAAGCCGGCGCGCGCGCACCTCACGCCCGCCTCCACACCGCCGGGACCTGCGCAGGCGCAGTCTCCGCCGGTCACGAACTTCGGCATCCACCGGCCGCCGCCGCACAACGCGCACCTAGATGACGACATCGTGGAGGTCCCCTACAAGCCGAAAAGCCCAGAAATAATCGATCTAGACGAGTACCCAGAGAGTCCCCAAGCTGTCAAGAAGAAGAAACTAGACATACTGAAGGAACGAGGACTGGAAGTAACCGCTCTCCCGCCCCCCTGGCAGGGAGTGGGCCCCATGATGGCCCCGCCCATGATCCTTAACCCCGCAGTACAACACCAGATCATGACGCAAGCACAGCTGTTCCAGATGTACAACATCATTCCCCCTAACTATGCCAACGGAATCCAGCCTCCTAAAGTCATCCAGGCGTCTTCTATCTTCGGTAACACAGGCCCTGAGAAGACTGTCTACGGGAATCCGAAAGACCCCTTCATGCCACCCCCTCATGTGTTACATGGGGTGCCAGTGAAGCCGTTAAAAACTGCCCCCCCTCCGCCCACCCCCCAGGATATATTAGACCTTACCTGCAAGTCCTCTAGCCCTCCTCCTCAGAAGCCTGCCGTGGAGATAGTAAGAGTACCTCCCTCTCAATCTCCGACTGCACAGAACTTGACGAAGAATTACACTTTAGTCGATGGTAAAGCCGTTGTGGGCTCGAATTTAGAAATTACTTTAGTGAACAAAGCTCAGAGTCCTGGCAAGAATAGGCCTCCACAGAAAAGGTCTAGCAATGGGAAATTCATGTCAGCGAAGACTGCTACTCCTCCTAAGGAACCCTACCCCAAGTACACCTCCCCTGGAAGCGCCCCTCAAAAGAAACCCCCAATCAACATCCCCAGCTACCAGATCAGGGAAGATTCCTCACCAACCCAGAATCAAGTACTACAGAACGCAATGAAGAATCAGAACCTAGctcaaataatggatttgcagAAGAACTCAGTTCCTATGACGTCTTTCATGGATCCTTACGTCGCTTTATACAGCAGTTTAGCAGGTCAGATGGACCAGAGACAACTGGCTATGTACCGGGACTTAATGACCAATCAGTTCAGATACCCGGGGTTGTTGAACCTCGGGGTCGCTACACCGACaacgaaaaattaa
Protein Sequence
MCLTLEGGAITHVRACKTAKEVWDALANAYEDKGMGRKLALERKLYRYQLLDFGSIEDYINAVISTAQDLADIGRHIDDMSIGAILLGGLPPEFDPLVMALENSNIQVTSELVKQKLLNESAKRESKELVLATNEKMKPLKAAERKVICYECKEPGHKRPDCPTRKKGKQKRQRKSKNNSKETTLISALGVGGNLVQTDWYVDSGASSHMSCMKELFTNLNMSESKNITLANNREIISAGVGEVLLVKDSKLKLNGIKDVLYVPELRTNLISVSKAVEKGLTIVFDKKGCSMYRRNEVKVVGKSVGHATCNVGGLYRLDHQVIHSEHAMASKEHTTSSLWHRQLGHLCRVALEHLRHGKAKGIEYSSLDKTPCIACIEGKQSRKPFKTIDYKKGSRILETIHSDVCGPFDVMSLGSNRYLVTFIDDFSRMIFSYFIPSKAHVKKMFLEFEALVERETSFKIRNLRTDNGGEYVNGEFEAYLTSRGIKHQTTVPYCPESNGVAERTNRSLVEKARCMLQDSNLPKTFWEDAVRTATYLKNRCPHRALDNRTPYEIWFNRKPDICHLRIFGCRAYVHVPSCDRQKLDAKAKQYIFVGYCDDNKSYRFRDPTNIRKSIKGRDVVFLENCFTNAEIGDESHRHSIILSSDNNNLQVQSGSADPVASTSTAAAEPSLSMAYPLPETPVVPVEEEETHMEPERRYKLRDRKPVNYCSVCCCSAMQSGELKDEPCSYSDSLLRPDKDMWIAAMEDEYNSLISNGTWTLVENTGQKIIPCKWVYKLKRDSEGKVSRYKARLVAKGFRQSYGIDYEETFSPVVRYSSLRVLIALATEQNLKMHHLDIDTAFLHGKLEEKVFMAQPEGFVAEGQETKVCQLHKSLYGLKQATRAWNKRLDEVLHNLGYNRLESEPCVYIKRSNSIAILAVYVDDLILIYNKENELSFLKNGLKDFFGVKDLGELSYCLGLHVVREKGTNDVKVNRNRYILEMLDRFNMAECKTVPTPMDISVDLRSQTEPAVNAPYQNLIGCLMFLAINTRPDILFAVNFLSQFNKNPMQAHWTAAKRVLQYLKGTLDYGLTFKRTGEPLRGFVDADWANGGDRRSYTGYVFKLANAPVSWECKKQPTVALSSTEAEYMALSSASKEAVYLQRLISEITGESFPDEVLAINEKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADMPRHAPLTHTKLDFSDVDTEKSAIVVDAAAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPDLSHAHLEPGSDRSDSDDPPASGPAGSDPPTPRRLSLRNGAPPPSDEEDEEYRRLEQSPEDRVFLQQLKLFYKTRSEPFRSGHTLKHLSLRALYLSVVSRGGYEAVCRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERYVTRHKLWRALARDQPARTRRHYERFLLPFENHERRNGTSLSFKLNGKLDAEPRTIATIDVTDSPRRDDDDKILRTPSPTPKLDNIDCETGEITTKDDIVIKNAEELNREFLDSLPKEEKLVKISVKPVEKLIEPGRGEGLPKVEQKDERDFSQNYLGDLQKFSMGAESLSCRATPLNGHAAPAPTDLKSSAPRPLGRSSLRAVRVKPARAHLTPASTPPGPAQAQSPPVTNFGIHRPPPHNAHLDDDIVEVPYKPKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQGVGPMMAPPMILNPAVQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPPPTPQDILDLTCKSSSPPPQKPAVEIVRVPPSQSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAQSPGKNRPPQKRSSNGKFMSAKTATPPKEPYPKYTSPGSAPQKKPPINIPSYQIREDSSPTQNQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-