Basic Information

Gene Symbol
Kdm5
Assembly
GCA_905147715.1
Location
LR990669.1:20155887-20226700[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-24 7.6e-21 76.3 0.0 2 89 102 185 101 185 0.93

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAACGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCTAGTATGAAACCTGATAATTTCTCGTTCACCCCGCCTCCAGAGGCACCTGTGTTCGAACCCACGCCAGAGGAATTCCTGGACCCCCTGGCATACATCAGCAAAATACGACCAATCGCTGAGAAATCGGGGATTTGCAAGATAAAACCTCCAGCGCATTGGAGCCCCCCATTTGCAGTGGACGTAGACCGGTTACGTTTTACACCGAGGATACAAAGACTCAATGAATTGGAGGCTATAACCCGCGTGAAACTGAACTTCTTGGACCAGATCATGAAGTTCTGGGAGCTGCAGGGCTCCGTGCTCAAGATCCCCACGGTAGAACGGAAGCCACTGGACCTTTATGCTCTACACAAGATTGTCAAGGAAGCAgGTGGCTTCGAAGTATGCTCCTCAGAGCGAAAATGGTCGAAGGTGGCCCGTCGCATGGGCTTCCCGCAAGGCAAGGGCATCGGCTCCATCCTCAAGAACCACTACGAGAAGATCCTGTACCGGTATGACATCTTCAAGAGCAATGGAGCGGTGGATAATAAGGAAACAGATATCAAATTAAAAGGCGAACAAACGCCAGAAAAAGCAAGCGGCACTCGCAGCCGCTCAACAAGCAAATGCACGGCGGCTGCGACCCCGCCTCCGGCGCGCCGGTTCAAGCCCGACCCGGACGGACCCACGCCGGCCGACACCGTGCCGGCCGACCGCACGCCCGCGCAGCTGCAGGAGGAGGCCATGAAGACTCCTGTCAAAGAGGAGAGCCCTGAGACCAGGAGGAGTCCTCGCGAGAACAAGTGGATGTCGGCAGGCGGCTCGTGCGGCGCGCGCTCCCGCGTGACGCGCGCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTATCCGTCACTCCCGCGCCGCCCTCCAGTCACGCCCTGCACCCGGACGACCCGCTGGCGAAGTACATGTGTCACGTTTGCGGGCGCGGCGACGTTGAGGAGCAGATGCTTCTCTGTGACGGCTGCGACGACTCTTACCATACCTTCTGCCTGCTCCCCCCGCTCGCCGACGTGCCCAAGGGAGACTGGCGCTGTCCCGTGTGCCTGGCTGAGGAGGTATCAAAACCCACAGAAGCGTTCGGCTTTGAGCAAGCGACGCGCGAGTACACTCTACAACAGTTCGGAGAGATGGCTGACCAGTTCAAGTCGGATTACTTCAATATGCCTGTACATATGGTGCCAACATCGACGGTTGAGAAAGAGTTCTGGCGCGTGGTATCGTCAATAGACGAGGATGTGACCGTGGAGTATGGCGCTGACCTGCACTCTATGGACCATGGCTCTGGTTTCCCCACACAGACGTACGCTCACCTATATCCTAGCGAGCAGCAGTACGCAGAGTCCTCATGGAATCTCAACAACCTGCCCGTCCTGGAGGGCTCTGTGCTCGGACACATCAATGCGGATATATCTGGGATGAAGATCCCCTGGCTATACGTCGGCATGTGCTTTGCCACATTCTGCTGGCACAACGAAGATCACTGGAGCTATTCCATCAACTACCTGCATTGGGGAGAGCCCAAAACTTGGTACGGAGTACCAAGTTCAAAAGCGGAGCAATTCGAAGCTGCCATGAAGGCGGAGGCACCGGAACTGTTCCAACTGCAGCCAGATTTGCTGCATCAGCTGGTCACCATCATGAACCCTAACGTTCTCATGAAGGCGGGAGTGCCCGTGTACAGGATGGACCAACACGCTGGTGAATTTGTGATAACGTTCCCGCGCGCGTACCACGCAGGGTTTAATCAGGGATACAACTTTGCTGAGGCGGTCAACTTTACACCTGCTGACTGGTTAAAAATGGGTCGTGAATGCATCACGCACTACTCAACACTCCGGCGCAACTGTGTGTTCTCGCACGATGAGTTGGTCTGCAAGATGGCGCTGGAAGCCGACTCGCTGAGTCTGACCGTGGCACTGGCGGCCTACAGGGACATGCGGACCATGCTGCATGATGAGAGGAAACTCAGGAAGGGGCTGCTGGACTGGGGTGTAACCGAAGCAGAACGCGAAGCCTTCGAGCTCCTGCCCGACGACGAGCGCCAGTGTCAGCTGTGCAAGACGACGTGCTTCCTGTCGTGCGTCACGTGCGTGTGCACGCCGCACGTGGCGTGCCTGCGACACTACACGCAGCTCTGCGACTGTCCCGCACACGTGCACAAGCTCAGATACCGCTACACGCTAGACGAGTTGCCAGCCATGCTAGAGAAGCTAAAGAAGAAATCGGAGCAGTTCCGGGAATGGGCGGAAGCTGTACAGAACGCGCTGGACCCCGACACGCCCAAGACCTGCGACCTGGACGGGCTTAGAGCGCATCTGAAGAGGGCACATGATCTCAAGATGCACAAAACCGAGCTGGTCCGAGCTCTAGAGACAGCGATCGAAGACGCGGAGAAGTGCGCGTCAGTGATCCAGCAGCTGGACCTCAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACCGCCTCACCATACACGAGCTCACGCTCTTCGCCGCAGAGATCGACGGCCTGGCCTGCGTGCTGCCCGAAGGTTCAGCAGTAAAAGAAGTATTACGACAGACATCAGAGTTTGAGAACCGCGCGACTGACCTGCTCAATAAAGATCTAGAGAAGACCGATCAGGCTTATGTCAGGGAATTGGAAGAGACGTCAGAACTGGGCTCCCGGCTATGCATCGTCCTGCCGCAGCTGCCCGCGCTACAAGCGCGCCTGCAGCAGGTGAAGTTCCTGGAGGAGGTGCGCGCCTACCGCGAGGAGTACTCCACCCTCACCTGTGACGTCATCGAGCGTCTGCTCACCACGGCCGCCAGCGTCGTGCCGCATCACAAGGTGGAGCTGGAGAGGTCGCTGCTCTATAACTTAAAAGCTCAAGTAGACGAATGGGAGTCCCGCGCTCGCTCCGTGCTCATCGACAGCTCGCGGAACCTCCCGGAGCCCGCGGGCCCGCCCGCCTACAGCACGCTGGCGGAGCTGGAGCTGCTGCTGGCCGACGGAGAGGAGATCGAGGCCGCGCTGCCGTCCTACCACGCGCTGCAGACCGCCGTCACACATGCCAGGGATTGGCTCAATAAGGTGGAAGAGATGCAATCAAAAGAGCTGTACCCATACATGCACAGCGTGGAGAACATAGTACGTCGCGGCGCGCAGATACCTCTGTCGCTGTACGAGAAGGATCAGCTGGCGCAGGCGCTGCAGTCCGCGCGGGACTGGAAGCGCGGCGCCGCTGATATGTTCCTGAAGAGGAACTGGGCCTACTCCCTCCTAGAAGCGCTGTCCCCGCGCGTGGAGGGCggggcgggcggcgcgggcgaggcgggcgggcggcggcgcgggcgggcgGCGGAGGGCGGCGCGGGGCTGTTCTTGCGCAACTTCAGCGAGGACTCCTCGCCCACCGACATCGTGGCCGCCTTCAAGCATGCAGAGACGCGGGAGCTGCAGCTTATCAAGGAGATGAGAGCTCGCAACATGCGGAAAGAGGTCCGCGCGCCGGTGTCGGCGGGCGTGACGTTCTGCACGTGCCAGAAGCGGCAGTACGGCGTCATGACGCAGTGCGAGCTGTGCAAGGACTGGTTCCATGCATCGTGTATAGCCGCCGCTAGAGAAGACCGCGAGGAGTCCCCGGACCGGGTGGAGGTCCCCTTCCCCAACACCGAACCCAAGTTCCTATGTCCTGACTGTATGAGGACCAAGCGACCTCGCCTGGACCGGTTATTAGCGTTACTGGTGTGGCTGCAGTCGCTGCCGGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGCGCGCTACTAGCGAGCCCCGCGCTAGCCGCGCTGCCGCTCGCGCCCAGCGCCGCCAGCGCCAGCCGCGAGCGCGCCGACAAGCTCAACGCCGAGCTCAAGAAGGCCACCGGCAGGGCGCACGACTCGCATAGCGCGCAGAATGTCAGATCATCAGCGAGTGTAGAGCACGCATACAGCGCGACGCCGCGGTCACCTAGCACACGCGTGGCGCCCGGACTGTTGCAGAAACTGGAAGACTTGATGTTGGAGGGAGATTTGTTAGAGGTGCGGTTAGAGGAGCAGGTGCAGGTGTGGAGCGCGGTGGTGGCCTGTCGCGGCGCTGAAGGGCGACGCGCCGCGCGGCACGACGCGGGCCGCCGCAAGCGACACACGCGTGCGCCCAGGCATCATCATCAGGTCAAGCGCACACGGACACGGCACCATCATGTTGCACCAGTCGTAAAACCAACGCTGAAACGAGGCACGGCTACCactacaaattatttaaatagaaaacagGGAATGTCATCAGGCTCGGGACTGATGATGCGCAAGCACTACATGGCGCGACAGGAGAGGCGCAAGCGCGGCCTCGCGCCCACCACGCGCGGGAAGCATCCCCGCCAGACCAGGATGGGTCAGCGCGCAGCAGCGAGCAGTTCGGGCGCGGGTCGCGGTGCCAGCAGCAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGTGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCGGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCCAGCAGCGTCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTCTTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGAGGATGAAGAGGACTGCGCCGCCAACAACTGTCTCAGACCTACTGGTACGTATTGTGCACACAGCGCCGCAGCAGTTCCTCGTCTGCATCATCAGCTGA
Protein Sequence
MGKCDEANVEVSMGDSASPSMKPDNFSFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWSPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIMKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSSERKWSKVARRMGFPQGKGIGSILKNHYEKILYRYDIFKSNGAVDNKETDIKLKGEQTPEKASGTRSRSTSKCTAAATPPPARRFKPDPDGPTPADTVPADRTPAQLQEEAMKTPVKEESPETRRSPRENKWMSAGGSCGARSRVTRATRLREHRMSNMTVSVTPAPPSSHALHPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTQTYAHLYPSEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECITHYSTLRRNCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCQLCKTTCFLSCVTCVCTPHVACLRHYTQLCDCPAHVHKLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTSEFENRATDLLNKDLEKTDQAYVRELEETSELGSRLCIVLPQLPALQARLQQVKFLEEVRAYREEYSTLTCDVIERLLTTAASVVPHHKVELERSLLYNLKAQVDEWESRARSVLIDSSRNLPEPAGPPAYSTLAELELLLADGEEIEAALPSYHALQTAVTHARDWLNKVEEMQSKELYPYMHSVENIVRRGAQIPLSLYEKDQLAQALQSARDWKRGAADMFLKRNWAYSLLEALSPRVEGGAGGAGEAGGRRRGRAAEGGAGLFLRNFSEDSSPTDIVAAFKHAETRELQLIKEMRARNMRKEVRAPVSAGVTFCTCQKRQYGVMTQCELCKDWFHASCIAAAREDREESPDRVEVPFPNTEPKFLCPDCMRTKRPRLDRLLALLVWLQSLPVRLAEGEALQCVTERAMAWQDAARALLASPALAALPLAPSAASASRERADKLNAELKKATGRAHDSHSAQNVRSSASVEHAYSATPRSPSTRVAPGLLQKLEDLMLEGDLLEVRLEEQVQVWSAVVACRGAEGRRAARHDAGRRKRHTRAPRHHHQVKRTRTRHHHVAPVVKPTLKRGTATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLAPTTRGKHPRQTRMGQRAAASSSGAGRGASSSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLVRIVHTAPSSVAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLVRIVHTAPSGVAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLRRSSSSSASSAEDEEDCAANNCLRPTGTYCAHSAQQRRSSSSSASSAEDEEDCAANNCLRPTGTSCAHSAAAVPRLHHQLRMKRTAPPTTVSDLLVRIVHTAPQQFLVCIIS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-