Basic Information

Insect: Xestia sexstrigata
Gene Symbol: -
Assembly: GCA_941918865.2
Location: CALNXB020000160.1:1531387-1539640[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.067 5.5 8.2 1.2 1 23 278 301 278 301 0.97

2 9 3.2 2.7e+02 2.9 1.0 2 20 326 344 325 348 0.87

3 9 0.027 2.2 9.4 4.2 1 23 367 389 367 389 0.97

4 9 1.1e-05 0.00087 20.2 2.7 2 23 394 415 393 415 0.96

5 9 0.00034 0.028 15.4 0.1 1 23 420 443 420 443 0.96

6 9 0.67 55 5.0 1.4 2 23 449 471 448 471 0.93

7 9 2.8e-05 0.0023 18.8 1.3 1 23 477 500 477 500 0.97

8 9 8.4e-06 0.00069 20.5 1.4 3 23 507 527 506 527 0.97

9 9 0.00014 0.012 16.6 3.0 1 23 533 555 533 555 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.067	5.5	8.2	1.2	1	23	278	301	278	301	0.97
2	9	3.2	2.7e+02	2.9	1.0	2	20	326	344	325	348	0.87
3	9	0.027	2.2	9.4	4.2	1	23	367	389	367	389	0.97
4	9	1.1e-05	0.00087	20.2	2.7	2	23	394	415	393	415	0.96
5	9	0.00034	0.028	15.4	0.1	1	23	420	443	420	443	0.96
6	9	0.67	55	5.0	1.4	2	23	449	471	448	471	0.93
7	9	2.8e-05	0.0023	18.8	1.3	1	23	477	500	477	500	0.97
8	9	8.4e-06	0.00069	20.5	1.4	3	23	507	527	506	527	0.97
9	9	0.00014	0.012	16.6	3.0	1	23	533	555	533	555	0.98

Sequence Information

Coding Sequence: ATGGATGCAGAAAACGTTGAGAGCTGGGTGTCGCAGCCAGATGTGTGCCGCTGTTGTCTGTCCGTAAGCGGGACGTGGGATGTCACCGCTTCCTATATTACGGAGGCCGGAAGCAAAGAGGTCTACTCCGAATTGTTGCAAGAGTGTTACGGGATTTCGTTGTCATATCTTATGGAGTGGGGCCCAAGTAGAATGGTGTGTGCCCTCTGTGTGGGCCACCTGAGGGATGCAATAAGCTTTCGAAAGCAAGTGGAACAGGCTGAGAGGCACTTTGTAGCTTATTGTGGCAACAGAAAAGATATTTTCAACCAAGGAATGATTAAGACTGAATTTGATCAAATACCACAAAGTATAGACAGTCTACAGTGTTTTAATAATATTGCAGAAGATAGCGAAGATGACAGTAAAGATACTTTGAAGGTAGATTCTACAATACAAGAAACAAACAAAATATTATTAAAAACATCTAAATCAAACGAAAACCGTAATACAAGCAAGAGAAAGAAGCATAAAACAATGCTAAAAGGGAAAAGAAAGAGAAAAAAGATTGATTTGAAAGAAGATGTGGATTCAGATACTCCTATATCTGAGTTGTCAAAACAAAATGTGCCAAAAGAAGTTACCGGGAAAAACGAAATTGAAATAACAGATGGTTTGCTCAAAGACAGTGAAGTAAAGGATCTCGATGGTTCCGTTTTTGAAATTGGTTACCAACACTCAAGCGGGCAGAACGGAGTCAAACAAGTTTCTGAGCGCAAACGTGTCATGCTAACGTGTGACACCGTCCTTAGAGACACCACCGCCTGTCCCTTCAGGCATCACAAGAGCTGGTTTCAGTGCTTCTTCTGCCAACAAGACTTCATGGAAATAAACCTTCTTAGAGATCATATGCTAAAAACTCACGCGGACATAGACGTAGAAATTAAAAAAATAAAACGCTATCCGCGCTCCTTGCAAATTGAAATTTCGAATCTCAAATGCCGGCAGTGCAATTTGACATTGACAGATGTCATTTCAATGTGCCGCCATTTTGTTGAAGTTCACAAGAAGGTTATCTATAACGAATGTATAGCTGATTATAAAGTTGATGCTAGTCCTTATTCTTGCCACTTGTGTGGTCTACAGTTTCATGTTTTCAGAACGTTAACAACACATTTAAACGAGCACTACGCTAACTGTATTTGCGATGTATGTGGCAAATCATTTATAAACTCAAAACGCTTGAAAGTCCACAAACGGACGCACGAAAGCGGTCAATTTCCTTGTGGGGAATGCGGCAAAGTTCTTAAAACTAAAACGTCAAAAGCGAATCACATGGAAAGCGCTCATTCTAAACGCGTTATCAAATGTCAAATATGTTTTAAACCTATGAAACATTATAATGACAGGATAAAGCACATGTCTGAGGCCCACAATATCACACATAAATTCAAATGTCCTATTTGTGGGCGAGAATATAACATAAAACATTACCTAGCTACTCACATACGTCAGACACACGGTCAAAAGAATAAGAATTGTTCAGAATGTGGCATGGCATTTATAACAAATCATGGTTTGAAGAAACATATGTTGAAACATAGTGGGTTGAAGCCTTTTAGTTGTAATATATGTTGTAAGTCGTACGCAAGGAGTTATACGTTGAGGGAACACATGAGGGCCCATGATAATGAGAAGCGGTTTATAGAAACTGAGTAG
Protein Sequence: MDAENVESWVSQPDVCRCCLSVSGTWDVTASYITEAGSKEVYSELLQECYGISLSYLMEWGPSRMVCALCVGHLRDAISFRKQVEQAERHFVAYCGNRKDIFNQGMIKTEFDQIPQSIDSLQCFNNIAEDSEDDSKDTLKVDSTIQETNKILLKTSKSNENRNTSKRKKHKTMLKGKRKRKKIDLKEDVDSDTPISELSKQNVPKEVTGKNEIEITDGLLKDSEVKDLDGSVFEIGYQHSSGQNGVKQVSERKRVMLTCDTVLRDTTACPFRHHKSWFQCFFCQQDFMEINLLRDHMLKTHADIDVEIKKIKRYPRSLQIEISNLKCRQCNLTLTDVISMCRHFVEVHKKVIYNECIADYKVDASPYSCHLCGLQFHVFRTLTTHLNEHYANCICDVCGKSFINSKRLKVHKRTHESGQFPCGECGKVLKTKTSKANHMESAHSKRVIKCQICFKPMKHYNDRIKHMSEAHNITHKFKCPICGREYNIKHYLATHIRQTHGQKNKNCSECGMAFITNHGLKKHMLKHSGLKPFSCNICCKSYARSYTLREHMRAHDNEKRFIETE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00071854;
90% Identity: iTF_00712339;
80% Identity: -