Basic Information

Insect: Xestia sexstrigata
Gene Symbol: -
Assembly: GCA_941918865.2
Location: CALNXB020000411.1:239852-261547[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.3 2.7e+02 2.9 0.1 3 23 120 140 118 140 0.95

2 14 0.0018 0.15 13.1 2.8 1 23 280 302 280 302 0.99

3 14 7.5e-05 0.0062 17.5 0.2 1 23 308 331 308 331 0.96

4 14 0.0008 0.066 14.2 1.0 1 23 336 359 336 359 0.94

5 14 9.2e-06 0.00076 20.3 0.5 2 23 523 544 523 544 0.98

6 14 0.00019 0.015 16.2 3.2 1 23 550 572 550 572 0.98

7 14 3 2.5e+02 3.0 5.0 1 23 636 658 629 658 0.97

8 14 0.012 1 10.5 2.9 1 23 693 715 693 715 0.98

9 14 0.00056 0.047 14.7 1.8 2 23 722 743 721 743 0.97

10 14 0.17 14 6.9 7.3 1 23 752 774 752 774 0.98

11 14 0.00052 0.043 14.8 0.6 2 23 830 851 830 851 0.97

12 14 0.0049 0.4 11.8 3.9 1 23 868 890 868 890 0.96

13 14 1.6e-06 0.00013 22.8 0.7 1 23 896 918 896 918 0.98

14 14 5.4e-07 4.4e-05 24.2 3.1 1 23 924 947 924 947 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.3	2.7e+02	2.9	0.1	3	23	120	140	118	140	0.95
2	14	0.0018	0.15	13.1	2.8	1	23	280	302	280	302	0.99
3	14	7.5e-05	0.0062	17.5	0.2	1	23	308	331	308	331	0.96
4	14	0.0008	0.066	14.2	1.0	1	23	336	359	336	359	0.94
5	14	9.2e-06	0.00076	20.3	0.5	2	23	523	544	523	544	0.98
6	14	0.00019	0.015	16.2	3.2	1	23	550	572	550	572	0.98
7	14	3	2.5e+02	3.0	5.0	1	23	636	658	629	658	0.97
8	14	0.012	1	10.5	2.9	1	23	693	715	693	715	0.98
9	14	0.00056	0.047	14.7	1.8	2	23	722	743	721	743	0.97
10	14	0.17	14	6.9	7.3	1	23	752	774	752	774	0.98
11	14	0.00052	0.043	14.8	0.6	2	23	830	851	830	851	0.97
12	14	0.0049	0.4	11.8	3.9	1	23	868	890	868	890	0.96
13	14	1.6e-06	0.00013	22.8	0.7	1	23	896	918	896	918	0.98
14	14	5.4e-07	4.4e-05	24.2	3.1	1	23	924	947	924	947	0.98

Sequence Information

Coding Sequence: ATGAACCAAGCAGCGGCAACTATACCAGGGAACATGGATGTAGACCCACTGCTCCCATATGAGTACCCAGCGTACGACAGCTTCGCAGCCCAGCCCTACCCGTACCCCAGCAAGCTGCAGCAGTCCATCTACCAAGCATACCAACAGACCAACACCAACTATATCAACACCCAGCCGCAAGAACCTGTCAGCCATCCACTACCAACACCACAAACGTCTATTGACATAGAGGTACCGCCTAAAAATGAAGTTAAAGACCCTAAACCAGTCCTAAAAAAGAGAAGGAAGGAGAAGAACGGCCAGAAAAGTACTTATTGTTCTGAAAAGATCACAGATGCTGCGTTCAAGTTCTACGGTTGTGCGGTCTGTAATGTGAGTTACGATGCACTCCACGACCTCGACCAGCACGTGACCGTCCACAAGAACAGGATGACCAGTTATAGACTGCGGTTACGGAACCAATTTAAAAAGAAACAAATTAAAAAAGAAAAGAAGAAGTTAAAAAAGTTGGTTAAAATTAAGAAAGAAAGCGAGTTGATAGTGGACATCAAACCTGAGGATGGATACATTGGAGAAGAGAAAGCAGCAGATTTTATTAATAATGGGATTATTCCAAATTCCGAACTAAATGGCAATGTTAATAACGAAACTAGTGCAATTGAAGCCCCGAATAGTCAAATTAATACGCATAATGATATAAACTCTACAAATAGCGATTCTCAGAGTAATGCAAGTAATTGTTTGAGCAACGGCAATACTGGAGGCAATAGAGACGACAGTATGAACTGTAAGGAGAACAGTATGGACGAGGCAGAGTTAACTAATTTAGAGAAAATTTACAAATGTTTTGCGTGTCAGAAACAGTTTACTTTGAGCTATTATTTGAAACTCCATGTGAGATCACATACGGACGAGAAGCCGTACACGTGCGCGGTGTGCGGCCAGTCCTTCATCACGGCGAGCAAGCTGGGCCGGCACAACAAGCGCATCCACCTGGCCGAGCGCTACCAGTGCCGCATCTGCTTCAAGGTCTACTCGCGGTTCGAGCTGCTGACAGCCCACTTCGACAAAGCGCACCCTGAAGACAAGCTGGAAGGAGAGCCGTATGACTACAACGCGATCCTGCCGTACCTGAAGGAGCTAGAGGAACAGCTGCGCGCGCCAGAGCAGGACGGCGCGTGCGAGCAGGATAGCAAGCCTCTCGCCGACCAGCTGTTCTGGGAGCAGACGGTGGGCCCGCAGCTGCAGGCGGCGCACACTGAGGAACCCGCCGGGATCAAGGAAGAGGCGCTGGACGAAGACCAGAAGGAGCTGGTGCCCAAACTAGACATACTCATCGAGGAGGTCAAAGTGGACTTTGACGTGCCGGTCAAGCGCGAGCTGTCGGACGACGAGACGCCCGGTGCCGTCGCCGGTGACGTCGCCAGTGACGGCGGCATCGGTGACGTCAAGGATGAAGATAGCCACTCAGACGAAGACTACTTCCCGGAGAACACGTGGGCGGCCCCCCCCGCCGCCTCCCCCGCGCCCCCTCCGCCCCCAGCCGACCGGCGCCGCGCGCCCCGCACCTGTGAGGTGTGCAACAAGAGCGTGAGCAGCGCGTCGTACATGCGCGTGCACATGCGCACGCACACGGGCGAGCGCCCCTTCAAGTGCTACACGTGCGGCCGCGGCTTCATCACCAGCTCCAAGATGCACCGCCACGTGCTCACGCATGCGCAAGACAAAGACGAAGTCAAAGCGGAAGGAGATGACACGAAACCGGAAGTGGGCGACGAAGAAACGAAACAGCAGGAACAGGATGTTGTCAAGAAACCAGCGAAGAAAAAATCCAAAATGAAATCGAAAACGCCAAAAACGAAGAACAGCGAAGACAAGCCGCGCCGCAAGCACCAGAAGAGACCGCACGCCTGTGAGTTCTGCAACCAGAAGTTCCTGCACCTCAACATGCTGGAGGTGCACACGCAGTCGCACGCGGGCGAGGCGCTCGTACTGCGCTGCCACTACTGCCTGCTGCCCGCGCCGGACGAGGAGGCGCGTCGGGAGCACGAGGCCACGCACACGGGCCCCAAGCCCTACACCTGCACGCTCTGCGGGAACACCTACAAGAAGAGAGAGACCATGGTGTACCACCGCAAGCGGCACGCGCCGGACGCGGAGCTCGTGTGCGACGTGTGCTCCAAGCGCTTCAGCGCCGCCTGCAAGCTGCGCAAGCACCTGCTCACGCATGCGCGCGACGGCTTCGTGCTGCGCTACGAGTGTCCCGTGTGCGCGCACATGTTCCACACCAAGTACCACGTGCACATGCATCTCAGCACGCACCAGAAGGAGGGCCTCATCTTAGAAGAGAACCGAAGCGAGATCCTCGCGATGGTACTCCAGAACGCGCGCAAGATACCGCGCGCCGGCACCGCGCCGCCCGCGCCGCCCGCGCACACTGCGCAGGCGCAGCCCGCCTCGCTCCTGCCGCCCGACGAGCGCTCGCGCGTCTGCAACATCTGCGGAGACGTCTTCTCACACTTTTACTACTTGGAAGAGCATCTGAAGAGCCACGGCTCGAGAATAAGCATCGCCGACGTCGACAAGCAAGAAGAGAAGAAGTACATCTGCACGATATGCAACAAGGGGTTCAAGTTGCACTACTATCTGAAGCTCCACAGCTTCACGCACTCGAAGGAGAAGCCGTTCATCTGTCAGCAGTGCGGGAAGGGTTTTATCACGAAGGGCAAGCTGAAGCGGCACCTGGAGACACATACGGGCTTGAAGAAGTACCAGTGCCACATCTGTTACAAGTTCTTCACGAGGCCGAGCTACCTGCGGATACATGTGCGGACTATACACGGTACGCAGGACTATAACTTCCGGTTCGACAAGGGTTACGGGCTGGGCTCATTCGCCATGTCCATGTCGGTGTCGGATGTCAGCCAGAATAGTGTTTAG
Protein Sequence: MNQAAATIPGNMDVDPLLPYEYPAYDSFAAQPYPYPSKLQQSIYQAYQQTNTNYINTQPQEPVSHPLPTPQTSIDIEVPPKNEVKDPKPVLKKRRKEKNGQKSTYCSEKITDAAFKFYGCAVCNVSYDALHDLDQHVTVHKNRMTSYRLRLRNQFKKKQIKKEKKKLKKLVKIKKESELIVDIKPEDGYIGEEKAADFINNGIIPNSELNGNVNNETSAIEAPNSQINTHNDINSTNSDSQSNASNCLSNGNTGGNRDDSMNCKENSMDEAELTNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCAVCGQSFITASKLGRHNKRIHLAERYQCRICFKVYSRFELLTAHFDKAHPEDKLEGEPYDYNAILPYLKELEEQLRAPEQDGACEQDSKPLADQLFWEQTVGPQLQAAHTEEPAGIKEEALDEDQKELVPKLDILIEEVKVDFDVPVKRELSDDETPGAVAGDVASDGGIGDVKDEDSHSDEDYFPENTWAAPPAASPAPPPPPADRRRAPRTCEVCNKSVSSASYMRVHMRTHTGERPFKCYTCGRGFITSSKMHRHVLTHAQDKDEVKAEGDDTKPEVGDEETKQQEQDVVKKPAKKKSKMKSKTPKTKNSEDKPRRKHQKRPHACEFCNQKFLHLNMLEVHTQSHAGEALVLRCHYCLLPAPDEEARREHEATHTGPKPYTCTLCGNTYKKRETMVYHRKRHAPDAELVCDVCSKRFSAACKLRKHLLTHARDGFVLRYECPVCAHMFHTKYHVHMHLSTHQKEGLILEENRSEILAMVLQNARKIPRAGTAPPAPPAHTAQAQPASLLPPDERSRVCNICGDVFSHFYYLEEHLKSHGSRISIADVDKQEEKKYICTICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGLGSFAMSMSVSDVSQNSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00928932;
90% Identity: iTF_01532369;
80% Identity: -