Basic Information

Insect: Xestia sexstrigata
Gene Symbol: -
Assembly: GCA_941918865.2
Location: CALNXB020000227.1:1706791-1711530[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00065 0.054 14.5 1.4 2 23 198 219 197 219 0.98

2 10 0.00075 0.062 14.3 4.6 2 20 227 245 226 248 0.93

3 10 0.0022 0.18 12.8 0.7 1 23 254 276 254 276 0.95

4 10 1.5e-06 0.00012 22.8 4.6 1 23 282 304 282 304 0.97

5 10 3.9e-05 0.0032 18.4 1.9 1 23 310 332 310 332 0.96

6 10 7.2e-05 0.0059 17.5 0.2 1 23 338 360 338 360 0.95

7 10 1.7e-05 0.0014 19.5 3.0 1 23 366 389 366 389 0.96

8 10 0.00063 0.052 14.6 2.5 1 23 395 417 395 417 0.95

9 10 1.1e-07 9e-06 26.4 1.5 1 23 423 445 423 445 0.99

10 10 4.3e-05 0.0036 18.2 1.9 1 23 451 473 451 473 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00065	0.054	14.5	1.4	2	23	198	219	197	219	0.98
2	10	0.00075	0.062	14.3	4.6	2	20	227	245	226	248	0.93
3	10	0.0022	0.18	12.8	0.7	1	23	254	276	254	276	0.95
4	10	1.5e-06	0.00012	22.8	4.6	1	23	282	304	282	304	0.97
5	10	3.9e-05	0.0032	18.4	1.9	1	23	310	332	310	332	0.96
6	10	7.2e-05	0.0059	17.5	0.2	1	23	338	360	338	360	0.95
7	10	1.7e-05	0.0014	19.5	3.0	1	23	366	389	366	389	0.96
8	10	0.00063	0.052	14.6	2.5	1	23	395	417	395	417	0.95
9	10	1.1e-07	9e-06	26.4	1.5	1	23	423	445	423	445	0.99
10	10	4.3e-05	0.0036	18.2	1.9	1	23	451	473	451	473	0.97

Sequence Information

Coding Sequence: ATGAATTTTAATGCCAAAAATCTTGATTTGTGTTGTCGTACTTGTTTGCGAGATGATTCCGAAGAATTGTATGAAATATTTCAAGAAGAAGCAACTGATTTGGTAGATATTGCTGAATTAATAACATCATATACTTCAATACGGGTGACCATGGACAATAGATTACCTAGGAAGATATGCAACAGTTGCTACAGTTTTTTATTAAGCATTAACGAATTTAAGCGCACTGCACTCAATGCTGATGCCAAGTTGAGAGAAAATTTTGCCAAAATCATTTGTGATGATGAAAACGAAGTTGGAAGCTTAAAGCAGAATAACAATCTAATAGAAATTAAACTTGAAGACGAATACAAAGAATATGAAATCGAAAATAACTTTGATGACAGTGTTGATTCTGAAATGGCAATTAAAGAGGAAATCTATCCATGTAATGTAACAACAATGTACTCAGATATATCAGATGCAAGTCTGCTTGAGGACCATCAAGCTAAACGTAAAAAAACTGGACTAAACATGGAACATTTTTTAACATACAGATCAGGTTCCAAGACTAAACATACTGAAATTAACCACAAAACAGACCAAAGAAAACAATGTGATGTTTGTTTAAAGACTTTCAATTCTGTCAACTCTTTATCAGCTCATAAAAGAAAACATACATCAAAAGATAGGGTTCTCTCATGTTCAGTGTGCAGTAAGGTATTCAAAAAACTATCTCATTTAAAAAGACATGAACTTTGTCACGAGAACAATCGCCCGTTCAAATGTTCTAAATGCTCAAAGTCTTTTGCTACCGAAGCTATTTTATCGGAGCATGAGAATAAGCATAATGGAATAAAACCTCATCACTGTCCGATATGTCCGAAGTCTTTTTCTCATCTTTCAACGTTAACCAGTCACATAAAGATTCATAGGAAAGACAAGCCCTATCTATGCTATACTTGTGGAAATAGGTTTGATTCAAGCACTAACTTGAATCAGCATATGAAGAGGCATTTAGGACTGAAATTATTTGCTTGCAACTTATGTCCTAGGAGGTTTGTAAGTAAAGGTGAATTAAAATCCCATGGCGTGACCCATACTGGTGAGAAGTCGTACAAATGCGACCAATGTAACGCAACATTCACAAAGCGCAGTTCTTTGACCAAACACAAGCTCAGCAGGCATCTTGGTATCAAGCCTTATCTGTGTGACGCTTGTCCTATGAAGTTCACGTTTAAAGAACACCTGAAGCGACACAACAGAATACATACGGGTGAAAGACCATACCGCTGTGAACTATGTGATCGTACGTTTACGCAAAGCGCTGATTTGACCAAGCATACTCGGTCTCATTTAGGAAATAATCTGTATAAATGCAACCAATGCAGCCAAAGCTTCAGACTAAAGACGGAACTCCGCCAGCATATATCGGAGCACTTCATAACTTCAAAATTCGAAGCATTGAAGATGAATAGTTCAGACAAACCTCTTACGTTGATTGGCAGTAATGCTGCAGTAGTGAGGGTGCCTCAGGAAAATGCAGTGGCTCAAGGCAATAATGAAAAGGTGATGCAGTAA
Protein Sequence: MNFNAKNLDLCCRTCLRDDSEELYEIFQEEATDLVDIAELITSYTSIRVTMDNRLPRKICNSCYSFLLSINEFKRTALNADAKLRENFAKIICDDENEVGSLKQNNNLIEIKLEDEYKEYEIENNFDDSVDSEMAIKEEIYPCNVTTMYSDISDASLLEDHQAKRKKTGLNMEHFLTYRSGSKTKHTEINHKTDQRKQCDVCLKTFNSVNSLSAHKRKHTSKDRVLSCSVCSKVFKKLSHLKRHELCHENNRPFKCSKCSKSFATEAILSEHENKHNGIKPHHCPICPKSFSHLSTLTSHIKIHRKDKPYLCYTCGNRFDSSTNLNQHMKRHLGLKLFACNLCPRRFVSKGELKSHGVTHTGEKSYKCDQCNATFTKRSSLTKHKLSRHLGIKPYLCDACPMKFTFKEHLKRHNRIHTGERPYRCELCDRTFTQSADLTKHTRSHLGNNLYKCNQCSQSFRLKTELRQHISEHFITSKFEALKMNSSDKPLTLIGSNAAVVRVPQENAVAQGNNEKVMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00685702;
90% Identity: iTF_00928931;
80% Identity: -